RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 ATRNL1Q5VV63 1379 aa10.88□□□□□ -0.67
CHKA-207ENST00000533728 C5orf42Q9H799 3197 aa10.87□□□□□ -0.67
CHKA-207ENST00000533728 ITIH6Q6UXX5 1313 aa10.87□□□□□ -0.67
CHKA-207ENST00000533728 PNMA6FA0A0J9YX94 578 aa10.87□□□□□ -0.67
CHKA-207ENST00000533728 MANSC4A6NHS7 340 aaPredicted RBP10.87□□□□□ -0.67
CHKA-207ENST00000533728 IGF2BP3O00425 579 aaKnown RBP eCLIP10.87□□□□□ -0.67
CHKA-207ENST00000533728 PSMD14O00487 310 aa10.87□□□□□ -0.67
CHKA-207ENST00000533728 CTIFO43310 598 aaKnown RBP10.87□□□□□ -0.67
CHKA-207ENST00000533728 STX10O60499 249 aa10.87□□□□□ -0.67
CHKA-207ENST00000533728 CDK11BP21127 795 aaKnown RBP10.87□□□□□ -0.67
CHKA-207ENST00000533728 UBA7P41226 1012 aa10.87□□□□□ -0.67
CHKA-207ENST00000533728 STAT6P42226 847 aa10.87□□□□□ -0.67
CHKA-207ENST00000533728 AFMP43652 599 aa10.87□□□□□ -0.67
CHKA-207ENST00000533728 PTPN14Q15678 1187 aa10.87□□□□□ -0.67
CHKA-207ENST00000533728 DOK7Q18PE1 504 aa10.87□□□□□ -0.67
CHKA-207ENST00000533728 INF2Q27J81 1249 aa10.87□□□□□ -0.67
CHKA-207ENST00000533728 FILIP1LQ4L180 1135 aa10.87□□□□□ -0.67
CHKA-207ENST00000533728 RRAGBQ5VZM2 374 aa10.87□□□□□ -0.67
CHKA-207ENST00000533728 SPECC1LQ69YQ0 1117 aa10.87□□□□□ -0.67
CHKA-207ENST00000533728 ISM2Q6H9L7 571 aa10.87□□□□□ -0.67
CHKA-207ENST00000533728 RSBN1LQ6PCB5 846 aaPredicted RBP10.87□□□□□ -0.67
CHKA-207ENST00000533728 USP17L2Q6R6M4 530 aa10.87□□□□□ -0.67
CHKA-207ENST00000533728 REXO1Q8N1G1 1221 aaKnown RBP10.87□□□□□ -0.67
CHKA-207ENST00000533728 USP38Q8NB14 1042 aa10.87□□□□□ -0.67
CHKA-207ENST00000533728 DCAF4Q8WV16 495 aa10.87□□□□□ -0.67
CHKA-207ENST00000533728 CCDC47Q96A33 483 aaKnown RBP10.87□□□□□ -0.67
CHKA-207ENST00000533728 DDX4Q9NQI0 724 aaKnown RBP10.87□□□□□ -0.67
CHKA-207ENST00000533728 KCNQ5Q9NR82 932 aa10.87□□□□□ -0.67
CHKA-207ENST00000533728 USP17L5A8MUK1 530 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 ARHGAP6O43182 974 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 ENTPD3O75355 529 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 RPN1P04843 607 aaKnown RBP10.86□□□□□ -0.67
CHKA-207ENST00000533728 AKR1B1P15121 316 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 GCFC2P16383 781 aaKnown RBP10.86□□□□□ -0.67
CHKA-207ENST00000533728 FXR2P51116 673 aaKnown RBP eCLIP10.86□□□□□ -0.67
CHKA-207ENST00000533728 ADCY7P51828 1080 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 ZNF280AP59817 542 aaPredicted RBP10.86□□□□□ -0.67
CHKA-207ENST00000533728 AMPD3Q01432 767 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 PDIA5Q14554 519 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 ARID5BQ14865 1188 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 SPRYD7Q5W111 196 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 CEP135Q66GS9 1140 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 CNNM4Q6P4Q7 775 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 FOXR2Q6PJQ5 311 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 APTXQ7Z2E3 356 aaKnown RBP10.86□□□□□ -0.67
CHKA-207ENST00000533728 GRAMD1CQ8IYS0 662 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 ANKRD20A12PQ8NF67 263 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 NOC3LQ8WTT2 800 aaKnown RBP10.86□□□□□ -0.67
CHKA-207ENST00000533728 ATXN2LQ8WWM7 1075 aaKnown RBP10.86□□□□□ -0.67
CHKA-207ENST00000533728 CCDC51Q96ER9 411 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 MED15Q96RN5 788 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 PIGSQ96S52 555 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 NAA15Q9BXJ9 866 aaKnown RBP10.86□□□□□ -0.67
CHKA-207ENST00000533728 RAB34Q9BZG1 259 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 SEMA6BQ9H3T3 888 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 KANSL2Q9H9L4 492 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 RIC8AQ9NPQ8 531 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 INTS13Q9NVM9 706 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 PI4KBQ9UBF8 816 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 STK17AQ9UEE5 414 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 LIMA1Q9UHB6 759 aaKnown RBP10.86□□□□□ -0.67
CHKA-207ENST00000533728 SSC5DA1L4H1 1573 aa10.86□□□□□ -0.67
CHKA-207ENST00000533728 TRANK1O15050 2925 aa10.85□□□□□ -0.67
CHKA-207ENST00000533728 SETXQ7Z333 2677 aaKnown RBP10.85□□□□□ -0.67
CHKA-207ENST00000533728 ADAMTS3O15072 1205 aa10.85□□□□□ -0.67
CHKA-207ENST00000533728 ZSCAN12O43309 604 aa10.85□□□□□ -0.67
CHKA-207ENST00000533728 RHOBTB3O94955 611 aa10.85□□□□□ -0.67
CHKA-207ENST00000533728 SYN1P17600 705 aa10.85□□□□□ -0.67
CHKA-207ENST00000533728 PBX1P40424 430 aa10.85□□□□□ -0.67
CHKA-207ENST00000533728 CLK2P49760 499 aaKnown RBP10.85□□□□□ -0.67
CHKA-207ENST00000533728 MRPL12P52815 198 aaKnown RBP10.85□□□□□ -0.67
CHKA-207ENST00000533728 PAK1Q13153 545 aa10.85□□□□□ -0.67
CHKA-207ENST00000533728 STIM1Q13586 685 aa10.85□□□□□ -0.67
CHKA-207ENST00000533728 TRIM14Q14142 442 aa10.85□□□□□ -0.67
CHKA-207ENST00000533728 NAALADL2Q58DX5 795 aa10.85□□□□□ -0.67
CHKA-207ENST00000533728 E4F1Q66K89 784 aaPredicted RBP10.85□□□□□ -0.67
CHKA-207ENST00000533728 PPP4R3AQ6IN85 833 aa10.85□□□□□ -0.67
CHKA-207ENST00000533728 TATDN1Q6P1N9 297 aa10.85□□□□□ -0.67
CHKA-207ENST00000533728 MOXD1Q6UVY6 613 aa10.85□□□□□ -0.67
CHKA-207ENST00000533728 IGSF22Q8N9C0 903 aa10.85□□□□□ -0.67
CHKA-207ENST00000533728 KIF18AQ8NI77 898 aa10.85□□□□□ -0.67
CHKA-207ENST00000533728 DHTKD1Q96HY7 919 aaPredicted RBP10.85□□□□□ -0.67
CHKA-207ENST00000533728 C16orf45Q96MC5 204 aaPredicted RBP10.85□□□□□ -0.67
CHKA-207ENST00000533728 ASB2Q96Q27 587 aa10.85□□□□□ -0.67
CHKA-207ENST00000533728 MTMR9Q96QG7 549 aa10.85□□□□□ -0.67
CHKA-207ENST00000533728 PANX2Q96RD6 677 aa10.85□□□□□ -0.67
CHKA-207ENST00000533728 C7orf25Q9BPX7 421 aa10.85□□□□□ -0.67
CHKA-207ENST00000533728 LRRC27Q9C0I9 530 aa10.85□□□□□ -0.67
CHKA-207ENST00000533728 TMEM60Q9H2L4 133 aa10.85□□□□□ -0.67
CHKA-207ENST00000533728 ADD3Q9UEY8 706 aaKnown RBP10.85□□□□□ -0.67
CHKA-207ENST00000533728 ZSWIM8A7E2V4 1837 aa10.85□□□□□ -0.67
CHKA-207ENST00000533728 ASTN2O75129 1339 aaPredicted RBP10.84□□□□□ -0.67
CHKA-207ENST00000533728 PTPRZ1P23471 2315 aaPredicted RBP10.84□□□□□ -0.67
CHKA-207ENST00000533728 RIOK3O14730 519 aaKnown RBP10.84□□□□□ -0.67
CHKA-207ENST00000533728 ZBTB5O15062 677 aa10.84□□□□□ -0.67
CHKA-207ENST00000533728 GOLGA8HP0CJ92 632 aa10.84□□□□□ -0.67
CHKA-207ENST00000533728 CCL5P13501 91 aa10.84□□□□□ -0.67
CHKA-207ENST00000533728 CD44P16070 742 aaKnown RBP10.84□□□□□ -0.67
CHKA-207ENST00000533728 FECHP22830 423 aa10.84□□□□□ -0.67
CHKA-207ENST00000533728 PICALMQ13492 652 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms