RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 ARHGAP1Q07960 439 aa12.07□□□□□ -0.48
CAPN1-225ENST00000533704 NBPF20Q3BBV1 942 aa12.07□□□□□ -0.48
CAPN1-225ENST00000533704 GPR153Q6NV75 609 aa12.07□□□□□ -0.48
CAPN1-225ENST00000533704 CCDC62Q6P9F0 684 aa12.07□□□□□ -0.48
CAPN1-225ENST00000533704 SYNE3Q6ZMZ3 975 aa12.07□□□□□ -0.48
CAPN1-225ENST00000533704 MICU3Q86XE3 530 aa12.07□□□□□ -0.48
CAPN1-225ENST00000533704 CCDC82Q8N4S0 544 aa12.07□□□□□ -0.48
CAPN1-225ENST00000533704 TCEANC2Q96MN5 208 aa12.07□□□□□ -0.48
CAPN1-225ENST00000533704 NEK1Q96PY6 1258 aa12.07□□□□□ -0.48
CAPN1-225ENST00000533704 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.07□□□□□ -0.48
CAPN1-225ENST00000533704 MTA3Q9BTC8 594 aa12.07□□□□□ -0.48
CAPN1-225ENST00000533704 ALDH8A1Q9H2A2 487 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-225ENST00000533704 TRMT13Q9NUP7 481 aaKnown RBP12.07□□□□□ -0.48
CAPN1-225ENST00000533704 NAP1L2Q9ULW6 460 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-225ENST00000533704 KAT6AQ92794 2004 aa12.06□□□□□ -0.48
CAPN1-225ENST00000533704 hCG_1642624A0A1W2PR95 340 aa12.06□□□□□ -0.48
CAPN1-225ENST00000533704 KPNA6O60684 536 aa12.06□□□□□ -0.48
CAPN1-225ENST00000533704 MMP3P08254 477 aa12.06□□□□□ -0.48
CAPN1-225ENST00000533704 CALM1P0DP23 149 aa12.06□□□□□ -0.48
CAPN1-225ENST00000533704 CALM2P0DP24 149 aa12.06□□□□□ -0.48
CAPN1-225ENST00000533704 CALM3P0DP25 149 aa12.06□□□□□ -0.48
CAPN1-225ENST00000533704 CYP2C9P11712 490 aa12.06□□□□□ -0.48
CAPN1-225ENST00000533704 PGM5Q15124 567 aa12.06□□□□□ -0.48
CAPN1-225ENST00000533704 ZNF697Q5TEC3 545 aa12.06□□□□□ -0.48
CAPN1-225ENST00000533704 DHX37Q8IY37 1157 aaKnown RBP12.06□□□□□ -0.48
CAPN1-225ENST00000533704 SRBD1Q8N5C6 995 aaKnown RBP12.06□□□□□ -0.48
CAPN1-225ENST00000533704 SMARCC2Q8TAQ2 1214 aa12.06□□□□□ -0.48
CAPN1-225ENST00000533704 CUL5Q93034 780 aa12.06□□□□□ -0.48
CAPN1-225ENST00000533704 MAP3K14Q99558 947 aa12.06□□□□□ -0.48
CAPN1-225ENST00000533704 LZTS2Q9BRK4 669 aa12.06□□□□□ -0.48
CAPN1-225ENST00000533704 NOC4LQ9BVI4 516 aaKnown RBP12.06□□□□□ -0.48
CAPN1-225ENST00000533704 SPZ1Q9BXG8 430 aa12.06□□□□□ -0.48
CAPN1-225ENST00000533704 SEZ6LQ9BYH1 1024 aa12.06□□□□□ -0.48
CAPN1-225ENST00000533704 MTMR10Q9NXD2 777 aa12.06□□□□□ -0.48
CAPN1-225ENST00000533704 MAP3K20Q9NYL2 800 aaKnown RBP12.06□□□□□ -0.48
CAPN1-225ENST00000533704 DDX41Q9UJV9 622 aaKnown RBP12.06□□□□□ -0.48
CAPN1-225ENST00000533704 NOD1Q9Y239 953 aa12.06□□□□□ -0.48
CAPN1-225ENST00000533704 CASTP20810 708 aaKnown RBP12.05□□□□□ -0.48
CAPN1-225ENST00000533704 LIFRP42702 1097 aa12.05□□□□□ -0.48
CAPN1-225ENST00000533704 FGD1P98174 961 aa12.05□□□□□ -0.48
CAPN1-225ENST00000533704 GHRHRQ02643 423 aa12.05□□□□□ -0.48
CAPN1-225ENST00000533704 ZNF365Q70YC5 407 aa12.05□□□□□ -0.48
CAPN1-225ENST00000533704 RASEFQ8IZ41 740 aa12.05□□□□□ -0.48
CAPN1-225ENST00000533704 SAMD3Q8N6K7 520 aa12.05□□□□□ -0.48
CAPN1-225ENST00000533704 SCLYQ96I15 445 aa12.05□□□□□ -0.48
CAPN1-225ENST00000533704 TANC1Q9C0D5 1861 aa12.05□□□□□ -0.48
CAPN1-225ENST00000533704 GGPS1O95749 300 aa12.04□□□□□ -0.48
CAPN1-225ENST00000533704 SUPT20HL2P0C7V6 817 aa12.04□□□□□ -0.48
CAPN1-225ENST00000533704 ZNF286BP0CG31 522 aa12.04□□□□□ -0.48
CAPN1-225ENST00000533704 SMAD3P84022 425 aaKnown RBP12.04□□□□□ -0.48
CAPN1-225ENST00000533704 DGKDQ16760 1214 aa12.04□□□□□ -0.48
CAPN1-225ENST00000533704 ADCK5Q3MIX3 580 aa12.04□□□□□ -0.48
CAPN1-225ENST00000533704 TMEM240Q5SV17 173 aa12.04□□□□□ -0.48
CAPN1-225ENST00000533704 PSRC1Q6PGN9 363 aaPredicted RBP12.04□□□□□ -0.48
CAPN1-225ENST00000533704 USP17L6PQ6QN14 398 aa12.04□□□□□ -0.48
CAPN1-225ENST00000533704 C16orf59Q7L2K0 433 aa12.04□□□□□ -0.48
CAPN1-225ENST00000533704 HEATR3Q7Z4Q2 680 aa12.04□□□□□ -0.48
CAPN1-225ENST00000533704 VSIG10LQ86VR7 867 aa12.04□□□□□ -0.48
CAPN1-225ENST00000533704 FANCBQ8NB91 859 aa12.04□□□□□ -0.48
CAPN1-225ENST00000533704 ALG1Q9BT22 464 aa12.04□□□□□ -0.48
CAPN1-225ENST00000533704 WNT8AQ9H1J5 351 aa12.04□□□□□ -0.48
CAPN1-225ENST00000533704 IL23AQ9NPF7 189 aa12.04□□□□□ -0.48
CAPN1-225ENST00000533704 RTEL1Q9NZ71 1219 aa12.04□□□□□ -0.48
CAPN1-225ENST00000533704 TET1Q8NFU7 2136 aa12.04□□□□□ -0.48
CAPN1-225ENST00000533704 ZBTB43O43298 467 aa12.03□□□□□ -0.48
CAPN1-225ENST00000533704 RGS20O76081 388 aa12.03□□□□□ -0.48
CAPN1-225ENST00000533704 CPA1P15085 419 aa12.03□□□□□ -0.48
CAPN1-225ENST00000533704 SMARCA1P28370 1054 aa12.03□□□□□ -0.48
CAPN1-225ENST00000533704 LAMC2Q13753 1193 aa12.03□□□□□ -0.48
CAPN1-225ENST00000533704 KRT32Q14532 448 aa12.03□□□□□ -0.48
CAPN1-225ENST00000533704 RTN1Q16799 776 aa12.03□□□□□ -0.48
CAPN1-225ENST00000533704 FAM109BQ6ICB4 259 aaPredicted RBP12.03□□□□□ -0.48
CAPN1-225ENST00000533704 NFRKBQ6P4R8 1299 aa12.03□□□□□ -0.48
CAPN1-225ENST00000533704 KCNV1Q6PIU1 500 aa12.03□□□□□ -0.48
CAPN1-225ENST00000533704 APOA5Q6Q788 366 aa12.03□□□□□ -0.48
CAPN1-225ENST00000533704 TMTC3Q6ZXV5 915 aa12.03□□□□□ -0.48
CAPN1-225ENST00000533704 DHX32Q7L7V1 743 aaKnown RBP12.03□□□□□ -0.48
CAPN1-225ENST00000533704 DEFB128Q7Z7B8 93 aa12.03□□□□□ -0.48
CAPN1-225ENST00000533704 GPKOWQ92917 476 aaPredicted RBP eCLIP12.03□□□□□ -0.48
CAPN1-225ENST00000533704 SPATA33Q96N06 139 aa12.03□□□□□ -0.48
CAPN1-225ENST00000533704 MLXIPQ9HAP2 919 aa12.03□□□□□ -0.48
CAPN1-225ENST00000533704 KLF18A0A0U1RQI7 1052 aa12.02□□□□□ -0.49
CAPN1-225ENST00000533704 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.02□□□□□ -0.49
CAPN1-225ENST00000533704 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.02□□□□□ -0.49
CAPN1-225ENST00000533704 GOLGA8AA7E2F4 631 aa12.02□□□□□ -0.49
CAPN1-225ENST00000533704 GOLGA8BA8MQT2 603 aa12.02□□□□□ -0.49
CAPN1-225ENST00000533704 ZBBXA8MT70 800 aa12.02□□□□□ -0.49
CAPN1-225ENST00000533704 GRXCR1A8MXD5 290 aa12.02□□□□□ -0.49
CAPN1-225ENST00000533704 FGBP02675 491 aa12.02□□□□□ -0.49
CAPN1-225ENST00000533704 UBA1P22314 1058 aaKnown RBP12.02□□□□□ -0.49
CAPN1-225ENST00000533704 PSEN2P49810 448 aa12.02□□□□□ -0.49
CAPN1-225ENST00000533704 SP2Q02086 613 aa12.02□□□□□ -0.49
CAPN1-225ENST00000533704 PTPN11Q06124 597 aaPredicted RBP12.02□□□□□ -0.49
CAPN1-225ENST00000533704 PTGISQ16647 500 aa12.02□□□□□ -0.49
CAPN1-225ENST00000533704 UBE2SQ16763 222 aa12.02□□□□□ -0.49
CAPN1-225ENST00000533704 GNPTABQ3T906 1256 aa12.02□□□□□ -0.49
CAPN1-225ENST00000533704 CELF3Q5SZQ8 465 aaKnown RBP12.02□□□□□ -0.49
CAPN1-225ENST00000533704 OTOP2Q7RTS6 562 aa12.02□□□□□ -0.49
CAPN1-225ENST00000533704 SGMS1Q86VZ5 419 aa12.02□□□□□ -0.49
CAPN1-225ENST00000533704 RPUSD2Q8IZ73 545 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms