RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 MCTP2Q6DN12 878 aa21.51■■□□□ 1.03
UBXN1-215ENST00000533476 ATRIPQ8WXE1 791 aa21.51■■□□□ 1.03
UBXN1-215ENST00000533476 MBOAT7Q96N66 472 aa21.51■■□□□ 1.03
UBXN1-215ENST00000533476 ANO3Q9BYT9 981 aa21.51■■□□□ 1.03
UBXN1-215ENST00000533476 IRX2Q9BZI1 471 aaPredicted RBP21.51■■□□□ 1.03
UBXN1-215ENST00000533476 TTYH3Q9C0H2 523 aa21.51■■□□□ 1.03
UBXN1-215ENST00000533476 PCDHA12Q9UN75 941 aa21.51■■□□□ 1.03
UBXN1-215ENST00000533476 USP17L15C9J2P7 530 aa21.5■■□□□ 1.03
UBXN1-215ENST00000533476 USP17L13C9JLJ4 530 aa21.5■■□□□ 1.03
UBXN1-215ENST00000533476 USP17L11C9JVI0 530 aa21.5■■□□□ 1.03
UBXN1-215ENST00000533476 USP17L18D6R9N7 530 aa21.5■■□□□ 1.03
UBXN1-215ENST00000533476 USP17L22D6RA61 530 aa21.5■■□□□ 1.03
UBXN1-215ENST00000533476 USP17L17D6RBQ6 530 aa21.5■■□□□ 1.03
UBXN1-215ENST00000533476 USP17L19D6RCP7 530 aa21.5■■□□□ 1.03
UBXN1-215ENST00000533476 USP17L20D6RJB6 530 aa21.5■■□□□ 1.03
UBXN1-215ENST00000533476 MARCH6O60337 910 aa21.5■■□□□ 1.03
UBXN1-215ENST00000533476 PPP2R3AQ06190 1150 aa21.5■■□□□ 1.03
UBXN1-215ENST00000533476 USP17L24Q0WX57 530 aa21.5■■□□□ 1.03
UBXN1-215ENST00000533476 MIIPQ5JXC2 388 aa21.5■■□□□ 1.03
UBXN1-215ENST00000533476 CC2D2BQ6DHV5 1058 aa21.5■■□□□ 1.03
UBXN1-215ENST00000533476 FOXR2Q6PJQ5 311 aa21.5■■□□□ 1.03
UBXN1-215ENST00000533476 USP17L6PQ6QN14 398 aa21.5■■□□□ 1.03
UBXN1-215ENST00000533476 MOXD1Q6UVY6 613 aa21.5■■□□□ 1.03
UBXN1-215ENST00000533476 DYMQ7RTS9 669 aa21.5■■□□□ 1.03
UBXN1-215ENST00000533476 SUPT20HQ8NEM7 779 aa21.5■■□□□ 1.03
UBXN1-215ENST00000533476 DDX12PQ92771 950 aa21.5■■□□□ 1.03
UBXN1-215ENST00000533476 NT5C3AQ9H0P0 336 aa21.5■■□□□ 1.03
UBXN1-215ENST00000533476 F5H6K3 240 aa21.49■■□□□ 1.03
UBXN1-215ENST00000533476 KLRC3Q07444 240 aa21.49■■□□□ 1.03
UBXN1-215ENST00000533476 ECM1Q16610 540 aa21.49■■□□□ 1.03
UBXN1-215ENST00000533476 ERGIC2Q96RQ1 377 aa21.49■■□□□ 1.03
UBXN1-215ENST00000533476 TDRD3Q9H7E2 651 aaKnown RBP21.49■■□□□ 1.03
UBXN1-215ENST00000533476 KCNMB3Q9NPA1 279 aa21.49■■□□□ 1.03
UBXN1-215ENST00000533476 ABCB11O95342 1321 aa21.49■■□□□ 1.03
UBXN1-215ENST00000533476 PSME4Q14997 1843 aa21.49■■□□□ 1.03
UBXN1-215ENST00000533476 SOCS7O14512 581 aa21.49■■□□□ 1.03
UBXN1-215ENST00000533476 GDF11O95390 407 aa21.49■■□□□ 1.03
UBXN1-215ENST00000533476 ARHGAP25P42331 645 aa21.49■■□□□ 1.03
UBXN1-215ENST00000533476 LRRC63Q05C16 580 aa21.49■■□□□ 1.03
UBXN1-215ENST00000533476 TBC1D8BQ0IIM8 1120 aa21.49■■□□□ 1.03
UBXN1-215ENST00000533476 MEA1Q16626 185 aa21.49■■□□□ 1.03
UBXN1-215ENST00000533476 NOC4LQ9BVI4 516 aaKnown RBP21.49■■□□□ 1.03
UBXN1-215ENST00000533476 AMNQ9BXJ7 453 aa21.49■■□□□ 1.03
UBXN1-215ENST00000533476 MYO1AQ9UBC5 1043 aa21.49■■□□□ 1.03
UBXN1-215ENST00000533476 MEIS2O14770 477 aa21.48■■□□□ 1.03
UBXN1-215ENST00000533476 NDUFA10O95299 355 aa21.48■■□□□ 1.03
UBXN1-215ENST00000533476 FGFR1OPO95684 399 aaKnown RBP21.48■■□□□ 1.03
UBXN1-215ENST00000533476 NDUFB10O96000 172 aa21.48■■□□□ 1.03
UBXN1-215ENST00000533476 BMS1Q14692 1282 aaKnown RBP21.48■■□□□ 1.03
UBXN1-215ENST00000533476 TSR1Q2NL82 804 aaKnown RBP21.48■■□□□ 1.03
UBXN1-215ENST00000533476 CRYGNQ8WXF5 182 aa21.48■■□□□ 1.03
UBXN1-215ENST00000533476 IQCDQ96DY2 449 aa21.48■■□□□ 1.03
UBXN1-215ENST00000533476 CHP1Q99653 195 aa21.48■■□□□ 1.03
UBXN1-215ENST00000533476 SYNPO2Q9UMS6 1093 aa21.48■■□□□ 1.03
UBXN1-215ENST00000533476 EPN1Q9Y6I3 576 aaPredicted RBP21.48■■□□□ 1.03
UBXN1-215ENST00000533476 KIF20AO95235 890 aa21.47■■□□□ 1.03
UBXN1-215ENST00000533476 FAM193AP78312 1265 aa21.47■■□□□ 1.03
UBXN1-215ENST00000533476 TUBB2AQ13885 445 aa21.47■■□□□ 1.03
UBXN1-215ENST00000533476 FIGNQ5HY92 759 aa21.47■■□□□ 1.03
UBXN1-215ENST00000533476 ZNF569Q5MCW4 686 aa21.47■■□□□ 1.03
UBXN1-215ENST00000533476 GJA10Q969M2 543 aa21.47■■□□□ 1.03
UBXN1-215ENST00000533476 DNAJC19Q96DA6 116 aa21.47■■□□□ 1.03
UBXN1-215ENST00000533476 PKNOX2Q96KN3 472 aa21.47■■□□□ 1.03
UBXN1-215ENST00000533476 SLF1Q9BQI6 1058 aa21.47■■□□□ 1.03
UBXN1-215ENST00000533476 TUBB2BQ9BVA1 445 aa21.47■■□□□ 1.03
UBXN1-215ENST00000533476 ARGLU1Q9NWB6 273 aaPredicted RBP21.47■■□□□ 1.03
UBXN1-215ENST00000533476 RASSF10A6NK89 507 aa21.47■■□□□ 1.03
UBXN1-215ENST00000533476 IDEP14735 1019 aa21.47■■□□□ 1.03
UBXN1-215ENST00000533476 TRIM21P19474 475 aaKnown RBP21.47■■□□□ 1.03
UBXN1-215ENST00000533476 FKBP15Q5T1M5 1219 aa21.47■■□□□ 1.03
UBXN1-215ENST00000533476 RBM26Q5T8P6 1007 aaKnown RBP21.47■■□□□ 1.03
UBXN1-215ENST00000533476 SYDE2Q5VT97 1194 aa21.47■■□□□ 1.03
UBXN1-215ENST00000533476 WDR59Q6PJI9 974 aa21.47■■□□□ 1.03
UBXN1-215ENST00000533476 SLFN12Q8IYM2 578 aa21.47■■□□□ 1.03
UBXN1-215ENST00000533476 EEF2KMTQ96G04 330 aa21.47■■□□□ 1.03
UBXN1-215ENST00000533476 A0A1W2PQJ5 194 aa21.46■■□□□ 1.03
UBXN1-215ENST00000533476 ZBED6P86452 979 aa21.46■■□□□ 1.03
UBXN1-215ENST00000533476 BTNL9Q6UXG8 535 aa21.46■■□□□ 1.03
UBXN1-215ENST00000533476 RSRC2Q7L4I2 434 aaKnown RBP21.46■■□□□ 1.03
UBXN1-215ENST00000533476 FBXO11Q86XK2 927 aa21.46■■□□□ 1.03
UBXN1-215ENST00000533476 ZNF446Q9NWS9 450 aa21.46■■□□□ 1.03
UBXN1-215ENST00000533476 REXO2Q9Y3B8 237 aaKnown RBP21.46■■□□□ 1.03
UBXN1-215ENST00000533476 YDJCA8MPS7 323 aa21.45■■□□□ 1.02
UBXN1-215ENST00000533476 PPIP5K2O43314 1243 aa21.45■■□□□ 1.02
UBXN1-215ENST00000533476 GH2P01242 217 aa21.45■■□□□ 1.02
UBXN1-215ENST00000533476 MMP14P50281 582 aa21.45■■□□□ 1.02
UBXN1-215ENST00000533476 ARHGAP4P98171 946 aa21.45■■□□□ 1.02
UBXN1-215ENST00000533476 COASYQ13057 564 aa21.45■■□□□ 1.02
UBXN1-215ENST00000533476 PRMT6Q96LA8 375 aaPredicted RBP21.45■■□□□ 1.02
UBXN1-215ENST00000533476 CTAGE9A4FU28 777 aa21.45■■□□□ 1.02
UBXN1-215ENST00000533476 ATP8B1O43520 1251 aa21.45■■□□□ 1.02
UBXN1-215ENST00000533476 BMP3P12645 472 aa21.45■■□□□ 1.02
UBXN1-215ENST00000533476 JAG1P78504 1218 aa21.45■■□□□ 1.02
UBXN1-215ENST00000533476 SLC15A2Q16348 729 aa21.45■■□□□ 1.02
UBXN1-215ENST00000533476 VWA3BQ502W6 1294 aa21.45■■□□□ 1.02
UBXN1-215ENST00000533476 LRRC55Q6ZSA7 311 aa21.45■■□□□ 1.02
UBXN1-215ENST00000533476 SLC35F6Q8N357 371 aa21.45■■□□□ 1.02
UBXN1-215ENST00000533476 CSRNP1Q96S65 589 aa21.45■■□□□ 1.02
UBXN1-215ENST00000533476 TSG101Q99816 390 aa21.45■■□□□ 1.02
UBXN1-215ENST00000533476 BMP2KQ9NSY1 1161 aaPredicted RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms