RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 PACS2Q86VP3 889 aa18.42■□□□□ 0.54
CTSB-228ENST00000533455 MARCH10Q8NA82 808 aaPredicted RBP18.42■□□□□ 0.54
CTSB-228ENST00000533455 DRC1Q96MC2 740 aa18.42■□□□□ 0.54
CTSB-228ENST00000533455 CAPS2Q9BXY5 557 aa18.42■□□□□ 0.54
CTSB-228ENST00000533455 MMRN2Q9H8L6 949 aa18.42■□□□□ 0.54
CTSB-228ENST00000533455 RNF14Q9UBS8 474 aa18.42■□□□□ 0.54
CTSB-228ENST00000533455 THRAP3Q9Y2W1 955 aaKnown RBP18.42■□□□□ 0.54
CTSB-228ENST00000533455 EIF3HO15372 352 aaKnown RBP eCLIP18.41■□□□□ 0.54
CTSB-228ENST00000533455 EHHADHQ08426 723 aa18.41■□□□□ 0.54
CTSB-228ENST00000533455 POTEDQ86YR6 584 aa18.41■□□□□ 0.54
CTSB-228ENST00000533455 TBCKQ8TEA7 893 aa18.41■□□□□ 0.54
CTSB-228ENST00000533455 LARP4BQ92615 738 aaKnown RBP18.41■□□□□ 0.54
CTSB-228ENST00000533455 TLR10Q9BXR5 811 aa18.41■□□□□ 0.54
CTSB-228ENST00000533455 NYXQ9GZU5 481 aa18.41■□□□□ 0.54
CTSB-228ENST00000533455 STX8Q9UNK0 236 aa18.41■□□□□ 0.54
CTSB-228ENST00000533455 LTBP4Q8N2S1 1624 aa18.41■□□□□ 0.54
CTSB-228ENST00000533455 SPATA31A1Q5TZJ5 1347 aa18.41■□□□□ 0.54
CTSB-228ENST00000533455 A0A087WUV0 522 aaPredicted RBP18.4■□□□□ 0.54
CTSB-228ENST00000533455 LDHBP07195 334 aaKnown RBP18.4■□□□□ 0.54
CTSB-228ENST00000533455 GSTO1P78417 241 aa18.4■□□□□ 0.54
CTSB-228ENST00000533455 PSMD2Q13200 908 aa18.4■□□□□ 0.54
CTSB-228ENST00000533455 SOGA3Q5TF21 947 aa18.4■□□□□ 0.54
CTSB-228ENST00000533455 KLHDC7AQ5VTJ3 777 aa18.4■□□□□ 0.54
CTSB-228ENST00000533455 TXNRD3Q86VQ6 643 aa18.4■□□□□ 0.54
CTSB-228ENST00000533455 TSEN2Q8NCE0 465 aaKnown RBP18.4■□□□□ 0.54
CTSB-228ENST00000533455 SLC44A5Q8NCS7 719 aa18.4■□□□□ 0.54
CTSB-228ENST00000533455 WDR66Q8TBY9 1149 aa18.4■□□□□ 0.54
CTSB-228ENST00000533455 NOX5Q96PH1 765 aa18.4■□□□□ 0.54
CTSB-228ENST00000533455 SALL4Q9UJQ4 1053 aa18.4■□□□□ 0.54
CTSB-228ENST00000533455 TNRC6CQ9HCJ0 1690 aaKnown RBP18.4■□□□□ 0.54
CTSB-228ENST00000533455 A6NNZ2 444 aa18.4■□□□□ 0.54
CTSB-228ENST00000533455 BAG3O95817 575 aa18.4■□□□□ 0.54
CTSB-228ENST00000533455 SLC7A5Q01650 507 aa18.4■□□□□ 0.54
CTSB-228ENST00000533455 TUBB8Q3ZCM7 444 aa18.4■□□□□ 0.54
CTSB-228ENST00000533455 TBC1D9BQ66K14 1250 aa18.4■□□□□ 0.54
CTSB-228ENST00000533455 HGSNATQ68CP4 663 aa18.4■□□□□ 0.54
CTSB-228ENST00000533455 C8orf74Q6P047 294 aa18.4■□□□□ 0.54
CTSB-228ENST00000533455 PROM2Q8N271 834 aa18.4■□□□□ 0.54
CTSB-228ENST00000533455 MTMR8Q96EF0 704 aa18.4■□□□□ 0.54
CTSB-228ENST00000533455 NLRP3Q96P20 1036 aa18.4■□□□□ 0.54
CTSB-228ENST00000533455 ZNF287Q9HBT7 754 aa18.4■□□□□ 0.54
CTSB-228ENST00000533455 RIC8AQ9NPQ8 531 aa18.4■□□□□ 0.54
CTSB-228ENST00000533455 MTMR7Q9Y216 660 aa18.4■□□□□ 0.54
CTSB-228ENST00000533455 NHSQ6T4R5 1651 aa18.39■□□□□ 0.54
CTSB-228ENST00000533455 hCG_1984214I3L0E3 225 aa18.39■□□□□ 0.53
CTSB-228ENST00000533455 HSF2BPO75031 334 aa18.39■□□□□ 0.53
CTSB-228ENST00000533455 TADA2BQ86TJ2 420 aa18.39■□□□□ 0.53
CTSB-228ENST00000533455 REXO1Q8N1G1 1221 aaKnown RBP18.39■□□□□ 0.53
CTSB-228ENST00000533455 ZNF713Q8N859 430 aaPredicted RBP18.39■□□□□ 0.53
CTSB-228ENST00000533455 RAD54LQ92698 747 aa18.39■□□□□ 0.53
CTSB-228ENST00000533455 SYN2Q92777 582 aaPredicted RBP18.39■□□□□ 0.53
CTSB-228ENST00000533455 LRRC27Q9C0I9 530 aa18.39■□□□□ 0.53
CTSB-228ENST00000533455 NUCKS1Q9H1E3 243 aaKnown RBP18.39■□□□□ 0.53
CTSB-228ENST00000533455 SEC63Q9UGP8 760 aaKnown RBP18.39■□□□□ 0.53
CTSB-228ENST00000533455 JAG2Q9Y219 1238 aa18.39■□□□□ 0.53
CTSB-228ENST00000533455 NCK2O43639 380 aa18.39■□□□□ 0.53
CTSB-228ENST00000533455 TXKP42681 527 aa18.39■□□□□ 0.53
CTSB-228ENST00000533455 TTMPQ5BVD1 217 aa18.39■□□□□ 0.53
CTSB-228ENST00000533455 LINC00116Q8NCU8 138 aa18.39■□□□□ 0.53
CTSB-228ENST00000533455 NEDD1Q8NHV4 660 aa18.39■□□□□ 0.53
CTSB-228ENST00000533455 TSG101Q99816 390 aa18.39■□□□□ 0.53
CTSB-228ENST00000533455 CPVLQ9H3G5 476 aa18.39■□□□□ 0.53
CTSB-228ENST00000533455 GDF3Q9NR23 364 aa18.39■□□□□ 0.53
CTSB-228ENST00000533455 RBM12Q9NTZ6 932 aaKnown RBP18.39■□□□□ 0.53
CTSB-228ENST00000533455 SMARCAL1Q9NZC9 954 aa18.39■□□□□ 0.53
CTSB-228ENST00000533455 EHD2Q9NZN4 543 aa18.39■□□□□ 0.53
CTSB-228ENST00000533455 CXCR5P32302 372 aa18.38■□□□□ 0.53
CTSB-228ENST00000533455 SLC1A4P43007 532 aa18.38■□□□□ 0.53
CTSB-228ENST00000533455 MATR3P43243 847 aaKnown RBP eCLIP18.38■□□□□ 0.53
CTSB-228ENST00000533455 CCT5P48643 541 aa18.38■□□□□ 0.53
CTSB-228ENST00000533455 GNGT1P63211 74 aa18.38■□□□□ 0.53
CTSB-228ENST00000533455 APBA1Q02410 837 aa18.38■□□□□ 0.53
CTSB-228ENST00000533455 KCNMA1Q12791 1236 aa18.38■□□□□ 0.53
CTSB-228ENST00000533455 CALCRLQ16602 461 aa18.38■□□□□ 0.53
CTSB-228ENST00000533455 TMEM266Q2M3C6 531 aa18.38■□□□□ 0.53
CTSB-228ENST00000533455 CFAP221Q4G0U5 840 aa18.38■□□□□ 0.53
CTSB-228ENST00000533455 TMEM119Q4V9L6 283 aa18.38■□□□□ 0.53
CTSB-228ENST00000533455 BICDL1Q6ZP65 573 aa18.38■□□□□ 0.53
CTSB-228ENST00000533455 TGFBRAP1Q8WUH2 860 aa18.38■□□□□ 0.53
CTSB-228ENST00000533455 RUFY1Q96T51 708 aa18.38■□□□□ 0.53
CTSB-228ENST00000533455 CEP72Q9P209 647 aa18.38■□□□□ 0.53
CTSB-228ENST00000533455 EBAG9O00559 213 aa18.37■□□□□ 0.53
CTSB-228ENST00000533455 NOVP48745 357 aa18.37■□□□□ 0.53
CTSB-228ENST00000533455 GFPT1Q06210 699 aaPredicted RBP18.37■□□□□ 0.53
CTSB-228ENST00000533455 PDIA5Q14554 519 aa18.37■□□□□ 0.53
CTSB-228ENST00000533455 C16orf86Q6ZW13 317 aa18.37■□□□□ 0.53
CTSB-228ENST00000533455 CACNA2D4Q7Z3S7 1137 aa18.37■□□□□ 0.53
CTSB-228ENST00000533455 IFT20Q8IY31 132 aa18.37■□□□□ 0.53
CTSB-228ENST00000533455 CDK5RAP3Q96JB5 506 aa18.37■□□□□ 0.53
CTSB-228ENST00000533455 HINFPQ9BQA5 517 aa18.37■□□□□ 0.53
CTSB-228ENST00000533455 BIN2Q9UBW5 565 aaPredicted RBP18.37■□□□□ 0.53
CTSB-228ENST00000533455 CNTNAP4Q9C0A0 1308 aa18.37■□□□□ 0.53
CTSB-228ENST00000533455 SHTN1A0MZ66 631 aa18.37■□□□□ 0.53
CTSB-228ENST00000533455 GRID2IPA4D2P6 1211 aa18.37■□□□□ 0.53
CTSB-228ENST00000533455 ANKRD65E5RJM6 399 aa18.37■□□□□ 0.53
CTSB-228ENST00000533455 RASSF7Q02833 373 aa18.37■□□□□ 0.53
CTSB-228ENST00000533455 ZCWPW2Q504Y3 356 aa18.37■□□□□ 0.53
CTSB-228ENST00000533455 DYMQ7RTS9 669 aa18.37■□□□□ 0.53
CTSB-228ENST00000533455 CERS3Q8IU89 383 aa18.37■□□□□ 0.53
CTSB-228ENST00000533455 MREGQ8N565 214 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms