RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 BTBD18B2RXH4 712 aa12.82□□□□□ -0.36
TRAPPC4-211ENST00000533012 SEPT4O43236 478 aa12.82□□□□□ -0.36
TRAPPC4-211ENST00000533012 AKR1A1P14550 325 aa12.82□□□□□ -0.36
TRAPPC4-211ENST00000533012 CCND3P30281 292 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC4-211ENST00000533012 USP11P51784 963 aa12.82□□□□□ -0.36
TRAPPC4-211ENST00000533012 MRPS9P82933 396 aaKnown RBP12.82□□□□□ -0.36
TRAPPC4-211ENST00000533012 ARHGAP4P98171 946 aa12.82□□□□□ -0.36
TRAPPC4-211ENST00000533012 GNL2Q13823 731 aaKnown RBP12.82□□□□□ -0.36
TRAPPC4-211ENST00000533012 NONOQ15233 471 aaKnown RBP eCLIP12.82□□□□□ -0.36
TRAPPC4-211ENST00000533012 MTFR1Q15390 333 aa12.82□□□□□ -0.36
TRAPPC4-211ENST00000533012 CCDC144BQ3MJ40 725 aa12.82□□□□□ -0.36
TRAPPC4-211ENST00000533012 GNPTABQ3T906 1256 aa12.82□□□□□ -0.36
TRAPPC4-211ENST00000533012 TAPT1Q6NXT6 567 aa12.82□□□□□ -0.36
TRAPPC4-211ENST00000533012 KCNV1Q6PIU1 500 aa12.82□□□□□ -0.36
TRAPPC4-211ENST00000533012 FBXO16Q8IX29 292 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC4-211ENST00000533012 TRPV1Q8NER1 839 aa12.82□□□□□ -0.36
TRAPPC4-211ENST00000533012 IL31RAQ8NI17 732 aa12.82□□□□□ -0.36
TRAPPC4-211ENST00000533012 KATNBL1Q9H079 304 aa12.82□□□□□ -0.36
TRAPPC4-211ENST00000533012 UNC93B1Q9H1C4 597 aa12.82□□□□□ -0.36
TRAPPC4-211ENST00000533012 DOCK3Q8IZD9 2030 aa12.81□□□□□ -0.36
TRAPPC4-211ENST00000533012 RBM47A0AV96 593 aaKnown RBP12.81□□□□□ -0.36
TRAPPC4-211ENST00000533012 MAFGO15525 162 aa12.81□□□□□ -0.36
TRAPPC4-211ENST00000533012 MSCO60682 206 aa12.81□□□□□ -0.36
TRAPPC4-211ENST00000533012 CYP3A4P08684 503 aa12.81□□□□□ -0.36
TRAPPC4-211ENST00000533012 TNFAIP2Q03169 654 aa12.81□□□□□ -0.36
TRAPPC4-211ENST00000533012 NR5A1Q13285 461 aa12.81□□□□□ -0.36
TRAPPC4-211ENST00000533012 TTLL4Q14679 1199 aa12.81□□□□□ -0.36
TRAPPC4-211ENST00000533012 PIK3AP1Q6ZUJ8 805 aa12.81□□□□□ -0.36
TRAPPC4-211ENST00000533012 NLRX1Q86UT6 975 aa12.81□□□□□ -0.36
TRAPPC4-211ENST00000533012 SPRYD3Q8NCJ5 442 aa12.81□□□□□ -0.36
TRAPPC4-211ENST00000533012 TBCKQ8TEA7 893 aa12.81□□□□□ -0.36
TRAPPC4-211ENST00000533012 SCFD2Q8WU76 684 aa12.81□□□□□ -0.36
TRAPPC4-211ENST00000533012 ZFP91Q96JP5 570 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC4-211ENST00000533012 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.81□□□□□ -0.36
TRAPPC4-211ENST00000533012 FOXP1Q9H334 677 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC4-211ENST00000533012 PDGFCQ9NRA1 345 aa12.81□□□□□ -0.36
TRAPPC4-211ENST00000533012 DDX20Q9UHI6 824 aaKnown RBP12.81□□□□□ -0.36
TRAPPC4-211ENST00000533012 MYH6P13533 1939 aa12.81□□□□□ -0.36
TRAPPC4-211ENST00000533012 TXNP10599 105 aaKnown RBP12.8□□□□□ -0.36
TRAPPC4-211ENST00000533012 TGFB3P10600 412 aa12.8□□□□□ -0.36
TRAPPC4-211ENST00000533012 RARBP10826 455 aa12.8□□□□□ -0.36
TRAPPC4-211ENST00000533012 PDIA4P13667 645 aaKnown RBP12.8□□□□□ -0.36
TRAPPC4-211ENST00000533012 ADCYAP1R1P41586 468 aa12.8□□□□□ -0.36
TRAPPC4-211ENST00000533012 CEP55Q53EZ4 464 aa12.8□□□□□ -0.36
TRAPPC4-211ENST00000533012 MCTP1Q6DN14 999 aa12.8□□□□□ -0.36
TRAPPC4-211ENST00000533012 ABHD8Q96I13 439 aa12.8□□□□□ -0.36
TRAPPC4-211ENST00000533012 CDHR1Q96JP9 859 aa12.8□□□□□ -0.36
TRAPPC4-211ENST00000533012 DEFB118Q96PH6 123 aa12.8□□□□□ -0.36
TRAPPC4-211ENST00000533012 MXRA8Q9BRK3 442 aa12.8□□□□□ -0.36
TRAPPC4-211ENST00000533012 WDR11Q9BZH6 1224 aa12.8□□□□□ -0.36
TRAPPC4-211ENST00000533012 JADE2Q9NQC1 790 aa12.8□□□□□ -0.36
TRAPPC4-211ENST00000533012 PAK6Q9NQU5 681 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC4-211ENST00000533012 DAXXQ9UER7 740 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC4-211ENST00000533012 UBIAD1Q9Y5Z9 338 aa12.8□□□□□ -0.36
TRAPPC4-211ENST00000533012 MRVI1Q9Y6F6 885 aa12.8□□□□□ -0.36
TRAPPC4-211ENST00000533012 ZNFX1Q9P2E3 1918 aaKnown RBP12.8□□□□□ -0.36
TRAPPC4-211ENST00000533012 SPATA31C2B4DYI2 1134 aa12.79□□□□□ -0.36
TRAPPC4-211ENST00000533012 FIBPO43427 364 aa12.79□□□□□ -0.36
TRAPPC4-211ENST00000533012 DUSP11O75319 330 aaKnown RBP12.79□□□□□ -0.36
TRAPPC4-211ENST00000533012 GJB1P08034 283 aa12.79□□□□□ -0.36
TRAPPC4-211ENST00000533012 SYT1P21579 422 aa12.79□□□□□ -0.36
TRAPPC4-211ENST00000533012 ICAM3P32942 547 aa12.79□□□□□ -0.36
TRAPPC4-211ENST00000533012 INF2Q27J81 1249 aa12.79□□□□□ -0.36
TRAPPC4-211ENST00000533012 DUSP28Q4G0W2 176 aa12.79□□□□□ -0.36
TRAPPC4-211ENST00000533012 ANO1Q5XXA6 986 aa12.79□□□□□ -0.36
TRAPPC4-211ENST00000533012 POTEDQ86YR6 584 aa12.79□□□□□ -0.36
TRAPPC4-211ENST00000533012 CRYGNQ8WXF5 182 aa12.79□□□□□ -0.36
TRAPPC4-211ENST00000533012 TNFRSF25Q93038 417 aa12.79□□□□□ -0.36
TRAPPC4-211ENST00000533012 GPRASP2Q96D09 838 aa12.79□□□□□ -0.36
TRAPPC4-211ENST00000533012 IPO9Q96P70 1041 aaKnown RBP12.79□□□□□ -0.36
TRAPPC4-211ENST00000533012 INPP4AQ96PE3 977 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC4-211ENST00000533012 NAP1L4Q99733 375 aaKnown RBP12.79□□□□□ -0.36
TRAPPC4-211ENST00000533012 DDX41Q9UJV9 622 aaKnown RBP12.79□□□□□ -0.36
TRAPPC4-211ENST00000533012 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 VPS37CA5D8V6 355 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 MEIS1O00470 390 aa12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 NKRFO15226 690 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 RGS20O76081 388 aa12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 SGPL1O95470 568 aa12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 TFRCP02786 760 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 SMPD1P17405 629 aa12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 CAPN2P17655 700 aa12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 ITGB5P18084 799 aa12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 U2AF2P26368 475 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 CIITAP33076 1130 aa12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 MTMR1Q13613 665 aa12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 LETM2Q2VYF4 491 aa12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 LHX8Q68G74 356 aa12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 CCDC62Q6P9F0 684 aa12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 NIPA1Q7RTP0 329 aa12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 NEK8Q86SG6 692 aa12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 NOSTRINQ8IVI9 506 aa12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 CYP2W1Q8TAV3 490 aa12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 AP5M1Q9H0R1 490 aa12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 SPC25Q9HBM1 224 aa12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 Q9Y3F1 56 aa12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 HTTP42858 3142 aa12.78□□□□□ -0.36
TRAPPC4-211ENST00000533012 CYP3A7-CYP3A51PA0A087WV96 503 aa12.77□□□□□ -0.37
TRAPPC4-211ENST00000533012 CCDC85CA6NKD9 419 aa12.77□□□□□ -0.37
TRAPPC4-211ENST00000533012 FAM86B1E9PN63 330 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms