RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 DLGAP5Q15398 846 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 SGO2Q562F6 1265 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 PLA2G4DQ86XP0 818 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 ZBTB38Q8NAP3 1195 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-233ENST00000532787 STAMQ92783 540 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 GLG1Q92896 1179 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 ANKRD36BP1Q96IX9 119 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 MLXIPQ9HAP2 919 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 TTLL3Q9Y4R7 772 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 CARMIL3Q8ND23 1372 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 A0A0D9SFI3 127 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 IQANK1A0A1B0GTG1 560 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 MAPK13O15264 365 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 TLR3O15455 904 aaKnown RBP8.24□□□□□ -1.09
CTNND1-233ENST00000532787 SLFN14P0C7P3 912 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 ACTN1P12814 892 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 SESN3P58005 492 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 FKBP3Q00688 224 aaKnown RBP8.24□□□□□ -1.09
CTNND1-233ENST00000532787 SEMA3FQ13275 785 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 RUBCNQ92622 972 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 COPRSQ9NQ92 184 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 USP40Q9NVE5 1235 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 MRFAP1Q9Y605 127 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 SCINQ9Y6U3 715 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 ARHGAP31Q2M1Z3 1444 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 PTPRTO14522 1441 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 USP17L12C9JPN9 530 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 USP17L21D6R901 530 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 SGK1O00141 431 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 PTH1RQ03431 593 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 BIRC2Q13490 618 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 SLFNL1Q499Z3 407 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 BZW1Q7L1Q6 419 aaKnown RBP8.24□□□□□ -1.09
CTNND1-233ENST00000532787 VSTM4Q8IW00 320 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 PIK3R5Q8WYR1 880 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 ATP6V0A1Q93050 837 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.24□□□□□ -1.095e-6■■■□□ 16.7
CTNND1-233ENST00000532787 DACT3Q96B18 629 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-233ENST00000532787 EPB41L5Q9HCM4 733 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 RCOR1Q9UKL0 485 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 MAD1L1Q9Y6D9 718 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 GCC2Q8IWJ2 1684 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 PODXLO00592 558 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 APOEP02649 317 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 MT-ND3P03897 115 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 CAV1Q03135 178 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 RBL2Q08999 1139 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 ZKSCAN8Q15776 578 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-233ENST00000532787 FAM47AQ5JRC9 791 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 TEDDM1Q5T9Z0 273 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 SCYL3Q8IZE3 742 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 RDH13Q8NBN7 331 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 KLHDC4Q8TBB5 520 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 CACTINQ8WUQ7 758 aaKnown RBP8.24□□□□□ -1.09
CTNND1-233ENST00000532787 SLC39A2Q9NP94 309 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 CLIC4Q9Y696 253 aa8.24□□□□□ -1.09
CTNND1-233ENST00000532787 ATP8B3O60423 1300 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 RPS8P62241 208 aaKnown RBP8.23□□□□□ -1.09
CTNND1-233ENST00000532787 ZMYM1Q5SVZ6 1142 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 TMC4Q7Z404 712 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 GIPC2Q8TF65 315 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 ATG3Q9NT62 314 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 SPTLC3Q9NUV7 552 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 PYCARDQ9ULZ3 195 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 LRRC63Q05C16 580 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 SCRN1Q12765 414 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 NNTQ13423 1086 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 TAF11Q15544 211 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 ZNF449Q6P9G9 518 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 PODNQ7Z5L7 613 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 JAG2Q9Y219 1238 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 POC1B-GALNT4F8VUJ3 575 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 CTNND1O60716 968 aaKnown RBP8.23□□□□□ -1.09
CTNND1-233ENST00000532787 TAF5LO75529 589 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 NR1D1P20393 614 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 NBPF10Q6P3W6 841 aaKnown RBP8.23□□□□□ -1.09
CTNND1-233ENST00000532787 RHOT2Q8IXI1 618 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 NIM1KQ8IY84 436 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 NME8Q8N427 588 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 FLAD1Q8NFF5 587 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 ABTB1Q969K4 478 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-233ENST00000532787 CCDC138Q96M89 665 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 NOP53Q9NZM5 478 aaKnown RBP8.23□□□□□ -1.09
CTNND1-233ENST00000532787 ANGPTL3Q9Y5C1 460 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 PCDHA5Q9Y5H7 936 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 ABCA5Q8WWZ7 1642 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 GNGT2O14610 69 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 SARM1Q6SZW1 724 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 FAM186BQ8IYM0 893 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 CPXCR1Q8N123 301 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 ZNF653Q96CK0 615 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 UPF3AQ9H1J1 476 aaKnown RBP8.23□□□□□ -1.09
CTNND1-233ENST00000532787 TLK1Q9UKI8 766 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 PCDHB4Q9Y5E5 795 aa8.23□□□□□ -1.09
CTNND1-233ENST00000532787 ESYT2A0FGR8 921 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 PLEKHG3A1L390 1219 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 BTBD18B2RXH4 712 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 RASGRF2O14827 1237 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 NR2F2P24468 414 aa8.22□□□□□ -1.09
CTNND1-233ENST00000532787 POLGP54098 1239 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms