RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 RIMBP3BA6NNM3 1639 aa16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 MADDQ8WXG6 1647 aa16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 RIMBP3Q9UFD9 1639 aa16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 RNF8O76064 485 aa16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 PTPREP23469 700 aa16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 PLCB4Q15147 1175 aa16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 GPT2Q8TD30 523 aa16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 NEDD4P46934 1319 aa16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 TRIM58Q8NG06 486 aa16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 PLCB1Q9NQ66 1216 aa16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 RNF181Q9P0P0 153 aa16.17■□□□□ 0.18
PCDHA9-202ENST00000532602 BSPRYQ5W0U4 402 aa16.16■□□□□ 0.18
PCDHA9-202ENST00000532602 ZBTB33Q86T24 672 aa16.16■□□□□ 0.18
PCDHA9-202ENST00000532602 PPM1KQ8N3J5 372 aa16.16■□□□□ 0.18
PCDHA9-202ENST00000532602 CERKQ8TCT0 537 aa16.16■□□□□ 0.18
PCDHA9-202ENST00000532602 CCDC160A6NGH7 325 aa16.16■□□□□ 0.18
PCDHA9-202ENST00000532602 HNRNPDLO14979 420 aaKnown RBP16.16■□□□□ 0.18
PCDHA9-202ENST00000532602 DESI2Q9BSY9 194 aa16.16■□□□□ 0.18
PCDHA9-202ENST00000532602 CLIC2O15247 247 aa16.16■□□□□ 0.18
PCDHA9-202ENST00000532602 EIF2AK2P19525 551 aaKnown RBP16.16■□□□□ 0.18
PCDHA9-202ENST00000532602 FBXO18Q8NFZ0 1043 aa16.16■□□□□ 0.18
PCDHA9-202ENST00000532602 CARD6Q9BX69 1037 aa16.16■□□□□ 0.18
PCDHA9-202ENST00000532602 OSBPL3Q9H4L5 887 aa16.16■□□□□ 0.18
PCDHA9-202ENST00000532602 FANCLQ9NW38 375 aa16.16■□□□□ 0.18
PCDHA9-202ENST00000532602 ABCA9Q8IUA7 1624 aa16.16■□□□□ 0.18
PCDHA9-202ENST00000532602 TYW5A2RUC4 315 aaKnown RBP16.16■□□□□ 0.18
PCDHA9-202ENST00000532602 GAP43P17677 238 aa16.16■□□□□ 0.18
PCDHA9-202ENST00000532602 LONRF2Q1L5Z9 754 aa16.16■□□□□ 0.18
PCDHA9-202ENST00000532602 FAM83BQ5T0W9 1011 aa16.16■□□□□ 0.18
PCDHA9-202ENST00000532602 LRFN2Q9ULH4 789 aa16.16■□□□□ 0.18
PCDHA9-202ENST00000532602 MTERF2Q49AM1 385 aa16.16■□□□□ 0.18
PCDHA9-202ENST00000532602 AK8Q96MA6 479 aa16.16■□□□□ 0.18
PCDHA9-202ENST00000532602 USP17L5A8MUK1 530 aa16.15■□□□□ 0.18
PCDHA9-202ENST00000532602 OSTNP61366 133 aa16.15■□□□□ 0.18
PCDHA9-202ENST00000532602 SLC44A5Q8NCS7 719 aa16.15■□□□□ 0.18
PCDHA9-202ENST00000532602 CD209Q9NNX6 404 aa16.15■□□□□ 0.18
PCDHA9-202ENST00000532602 BBS5Q8N3I7 341 aa16.15■□□□□ 0.18
PCDHA9-202ENST00000532602 IFT122Q9HBG6 1241 aa16.15■□□□□ 0.18
PCDHA9-202ENST00000532602 GOLGA8CPA6NN73 597 aa16.15■□□□□ 0.18
PCDHA9-202ENST00000532602 NEDD9Q14511 834 aa16.15■□□□□ 0.18
PCDHA9-202ENST00000532602 FAM160B2Q86V87 743 aa16.15■□□□□ 0.18
PCDHA9-202ENST00000532602 VPS37BQ9H9H4 285 aa16.15■□□□□ 0.18
PCDHA9-202ENST00000532602 PPRC1Q5VV67 1664 aaKnown RBP16.15■□□□□ 0.18
PCDHA9-202ENST00000532602 GOLGA8FQ08AF8 430 aa16.15■□□□□ 0.18
PCDHA9-202ENST00000532602 GOLGA8DPQ0D2H9 430 aa16.15■□□□□ 0.18
PCDHA9-202ENST00000532602 B4GALNT4Q76KP1 1039 aa16.15■□□□□ 0.18
PCDHA9-202ENST00000532602 MAP7D3Q8IWC1 876 aa16.15■□□□□ 0.18
PCDHA9-202ENST00000532602 FAM81BQ96LP2 452 aa16.15■□□□□ 0.18
PCDHA9-202ENST00000532602 PNMA3Q9UL41 463 aa16.15■□□□□ 0.18
PCDHA9-202ENST00000532602 IFNB1P01574 187 aa16.15■□□□□ 0.18
PCDHA9-202ENST00000532602 AFAP1L1Q8TED9 768 aa16.15■□□□□ 0.18
PCDHA9-202ENST00000532602 NLRP7Q8WX94 980 aa16.15■□□□□ 0.18
PCDHA9-202ENST00000532602 FOXP1Q9H334 677 aaPredicted RBP16.15■□□□□ 0.18
PCDHA9-202ENST00000532602 A0A0G2JLW4 131 aa16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 NSFP46459 744 aaKnown RBP16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 PTK2Q05397 1052 aa16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 ADAT2Q7Z6V5 191 aaKnown RBP16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 METTL23Q86XA0 190 aa16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 TAB3Q8N5C8 712 aaPredicted RBP16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 MMP1P03956 469 aa16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 MAN1A1P33908 653 aa16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 ZNF445P59923 1031 aa16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 FOXP4Q8IVH2 680 aaPredicted RBP16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 ARHGAP24Q8N264 748 aa16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 INO80B-WBP1J3KQ70 363 aa16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 TBC1D10CQ8IV04 446 aa16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 LARP4BQ92615 738 aaKnown RBP16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 INO80BQ9C086 356 aaPredicted RBP16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 ZNF215Q9UL58 517 aaPredicted RBP16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 SPDYE16A6NNV3 312 aaPredicted RBP16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 PHBP35232 272 aa16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 NFIXQ14938 502 aa16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 SPDYE2Q495Y8 402 aa16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 CEP170P1Q96L14 293 aa16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 LAMC1P11047 1609 aa16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 H2AFZP0C0S5 128 aa16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 CCDC62Q6P9F0 684 aa16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 H2AFVQ71UI9 128 aa16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 CTAGE3PQ8IX95 158 aa16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 WRNIP1Q96S55 665 aa16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 RAVER2Q9HCJ3 691 aaKnown RBP16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 KMT5AQ9NQR1 393 aa16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 SEPT10Q9P0V9 454 aa16.14■□□□□ 0.17
PCDHA9-202ENST00000532602 CTTNQ14247 550 aaKnown RBP16.13■□□□□ 0.17
PCDHA9-202ENST00000532602 NT5C1BQ96P26 610 aa16.13■□□□□ 0.17
PCDHA9-202ENST00000532602 CCDC68Q9H2F9 335 aa16.13■□□□□ 0.17
PCDHA9-202ENST00000532602 DISC1Q9NRI5 854 aa16.13■□□□□ 0.17
PCDHA9-202ENST00000532602 PPP1R2P3Q6NXS1 205 aa16.13■□□□□ 0.17
PCDHA9-202ENST00000532602 ZHX2Q9Y6X8 837 aa16.13■□□□□ 0.17
PCDHA9-202ENST00000532602 TBC1D8O95759 1140 aa16.13■□□□□ 0.17
PCDHA9-202ENST00000532602 ZSCAN20P17040 1043 aaPredicted RBP16.13■□□□□ 0.17
PCDHA9-202ENST00000532602 TMED8Q6PL24 325 aaPredicted RBP16.13■□□□□ 0.17
PCDHA9-202ENST00000532602 CYB5R4Q7L1T6 521 aa16.13■□□□□ 0.17
PCDHA9-202ENST00000532602 PALM2Q8IXS6 379 aa16.13■□□□□ 0.17
PCDHA9-202ENST00000532602 MICALL1Q8N3F8 863 aa16.13■□□□□ 0.17
PCDHA9-202ENST00000532602 ANKRD36BP1Q96IX9 119 aa16.13■□□□□ 0.17
PCDHA9-202ENST00000532602 GJB4Q9NTQ9 266 aa16.13■□□□□ 0.17
PCDHA9-202ENST00000532602 MFAP3P55082 362 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms