RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 RBM27Q9P2N5 1060 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-220ENST00000532375 DDX41Q9UJV9 622 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-220ENST00000532375 ESYT2A0FGR8 921 aa16.02■□□□□ 0.16
TSPAN4-220ENST00000532375 KBTBD13C9JR72 458 aa16.02■□□□□ 0.16
TSPAN4-220ENST00000532375 DTNBO60941 627 aa16.02■□□□□ 0.16
TSPAN4-220ENST00000532375 C6orf222P0C671 652 aaPredicted RBP16.02■□□□□ 0.16
TSPAN4-220ENST00000532375 MYCLP12524 364 aaPredicted RBP16.02■□□□□ 0.16
TSPAN4-220ENST00000532375 ACLYP53396 1101 aa16.02■□□□□ 0.16
TSPAN4-220ENST00000532375 BEX3Q00994 111 aa16.02■□□□□ 0.16
TSPAN4-220ENST00000532375 SLC39A5Q6ZMH5 540 aa16.02■□□□□ 0.16
TSPAN4-220ENST00000532375 SEPT14Q6ZU15 432 aa16.02■□□□□ 0.16
TSPAN4-220ENST00000532375 NECAB1Q8N987 351 aa16.02■□□□□ 0.16
TSPAN4-220ENST00000532375 SMARCC2Q8TAQ2 1214 aa16.02■□□□□ 0.16
TSPAN4-220ENST00000532375 FERMT2Q96AC1 680 aa16.02■□□□□ 0.16
TSPAN4-220ENST00000532375 BACH2Q9BYV9 841 aa16.02■□□□□ 0.16
TSPAN4-220ENST00000532375 SLKQ9H2G2 1235 aaPredicted RBP16.02■□□□□ 0.16
TSPAN4-220ENST00000532375 PCDHA6Q9UN73 950 aa16.02■□□□□ 0.16
TSPAN4-220ENST00000532375 PCDHA8Q9Y5H6 950 aa16.02■□□□□ 0.16
TSPAN4-220ENST00000532375 CEP290O15078 2479 aa16.02■□□□□ 0.15
TSPAN4-220ENST00000532375 TXNP10599 105 aaKnown RBP16.01■□□□□ 0.15
TSPAN4-220ENST00000532375 SP2Q02086 613 aa16.01■□□□□ 0.15
TSPAN4-220ENST00000532375 SEMA3FQ13275 785 aa16.01■□□□□ 0.15
TSPAN4-220ENST00000532375 TTLL4Q14679 1199 aa16.01■□□□□ 0.15
TSPAN4-220ENST00000532375 LY6KQ17RY6 165 aa16.01■□□□□ 0.15
TSPAN4-220ENST00000532375 GNASQ5JWF2 1037 aa16.01■□□□□ 0.15
TSPAN4-220ENST00000532375 C1orf53Q5VUE5 145 aa16.01■□□□□ 0.15
TSPAN4-220ENST00000532375 PCNX4Q63HM2 1172 aa16.01■□□□□ 0.15
TSPAN4-220ENST00000532375 CUL5Q93034 780 aa16.01■□□□□ 0.15
TSPAN4-220ENST00000532375 AIFM3Q96NN9 605 aa16.01■□□□□ 0.15
TSPAN4-220ENST00000532375 INPP4AQ96PE3 977 aaPredicted RBP16.01■□□□□ 0.15
TSPAN4-220ENST00000532375 A0A1W2PQ45 241 aaPredicted RBP16■□□□□ 0.15
TSPAN4-220ENST00000532375 A0A1W2PQY0 241 aa16■□□□□ 0.15
TSPAN4-220ENST00000532375 MOXD2PA6NHM9 499 aa16■□□□□ 0.15
TSPAN4-220ENST00000532375 A6NJR5 290 aa16■□□□□ 0.15
TSPAN4-220ENST00000532375 NKRFO15226 690 aaKnown RBP eCLIP16■□□□□ 0.152e-6■■■□□ 15.4
TSPAN4-220ENST00000532375 EDIL3O43854 480 aa16■□□□□ 0.15
TSPAN4-220ENST00000532375 MYCNP04198 464 aaPredicted RBP16■□□□□ 0.15
TSPAN4-220ENST00000532375 ASGR1P07306 291 aa16■□□□□ 0.15
TSPAN4-220ENST00000532375 FDPSP14324 419 aaKnown RBP16■□□□□ 0.15
TSPAN4-220ENST00000532375 CCND2P30279 289 aa16■□□□□ 0.15
TSPAN4-220ENST00000532375 ICAM3P32942 547 aa16■□□□□ 0.15
TSPAN4-220ENST00000532375 ARHGAP1Q07960 439 aa16■□□□□ 0.15
TSPAN4-220ENST00000532375 SSRP1Q08945 709 aaKnown RBP16■□□□□ 0.15
TSPAN4-220ENST00000532375 NPY5RQ15761 445 aa16■□□□□ 0.15
TSPAN4-220ENST00000532375 FSCN1Q16658 493 aaKnown RBP16■□□□□ 0.15
TSPAN4-220ENST00000532375 NOL8Q76FK4 1167 aaKnown RBP16■□□□□ 0.15
TSPAN4-220ENST00000532375 PCSK9Q8NBP7 692 aaKnown RBP16■□□□□ 0.15
TSPAN4-220ENST00000532375 CRYGNQ8WXF5 182 aa16■□□□□ 0.15
TSPAN4-220ENST00000532375 DPF3Q92784 378 aa16■□□□□ 0.15
TSPAN4-220ENST00000532375 GTF3C6Q969F1 213 aa16■□□□□ 0.15
TSPAN4-220ENST00000532375 TBC1D32Q96NH3 1257 aa16■□□□□ 0.15
TSPAN4-220ENST00000532375 AP5M1Q9H0R1 490 aa16■□□□□ 0.15
TSPAN4-220ENST00000532375 BCAS3Q9H6U6 928 aa16■□□□□ 0.15
TSPAN4-220ENST00000532375 TMEM260Q9NX78 707 aa16■□□□□ 0.15
TSPAN4-220ENST00000532375 GRIN2DO15399 1336 aa15.99■□□□□ 0.15
TSPAN4-220ENST00000532375 SPATA31C2B4DYI2 1134 aa15.99■□□□□ 0.15
TSPAN4-220ENST00000532375 CPLX1O14810 134 aa15.99■□□□□ 0.15
TSPAN4-220ENST00000532375 STAM2O75886 525 aa15.99■□□□□ 0.15
TSPAN4-220ENST00000532375 DEXIO95424 95 aa15.99■□□□□ 0.15
TSPAN4-220ENST00000532375 CDK7P50613 346 aa15.99■□□□□ 0.15
TSPAN4-220ENST00000532375 ADCY7P51828 1080 aa15.99■□□□□ 0.15
TSPAN4-220ENST00000532375 ATN1P54259 1190 aaPredicted RBP15.99■□□□□ 0.15
TSPAN4-220ENST00000532375 XRRA1Q6P2D8 792 aa15.99■□□□□ 0.15
TSPAN4-220ENST00000532375 PGBD1Q96JS3 809 aa15.99■□□□□ 0.15
TSPAN4-220ENST00000532375 SPC25Q9HBM1 224 aa15.99■□□□□ 0.15
TSPAN4-220ENST00000532375 SH3GLB2Q9NR46 395 aa15.99■□□□□ 0.15
TSPAN4-220ENST00000532375 RTEL1Q9NZ71 1219 aa15.99■□□□□ 0.15
TSPAN4-220ENST00000532375 VPS54Q9P1Q0 977 aa15.99■□□□□ 0.15
TSPAN4-220ENST00000532375 UBIAD1Q9Y5Z9 338 aa15.99■□□□□ 0.15
TSPAN4-220ENST00000532375 DOCK5Q9H7D0 1870 aa15.99■□□□□ 0.15
TSPAN4-220ENST00000532375 SCN10AQ9Y5Y9 1956 aa15.98■□□□□ 0.15
TSPAN4-220ENST00000532375 ELP1O95163 1332 aa15.98■□□□□ 0.15
TSPAN4-220ENST00000532375 STK36Q9NRP7 1315 aa15.98■□□□□ 0.15
TSPAN4-220ENST00000532375 H0YGN5 161 aa15.98■□□□□ 0.15
TSPAN4-220ENST00000532375 FOSP01100 380 aaPredicted RBP15.98■□□□□ 0.15
TSPAN4-220ENST00000532375 TGFB3P10600 412 aa15.98■□□□□ 0.15
TSPAN4-220ENST00000532375 ITGB5P18084 799 aa15.98■□□□□ 0.15
TSPAN4-220ENST00000532375 AKAP17AQ02040 695 aaKnown RBP15.98■□□□□ 0.15
TSPAN4-220ENST00000532375 MYSM1Q5VVJ2 828 aa15.98■□□□□ 0.15
TSPAN4-220ENST00000532375 CXCL17Q6UXB2 119 aa15.98■□□□□ 0.15
TSPAN4-220ENST00000532375 SLC43A3Q8NBI5 491 aa15.98■□□□□ 0.15
TSPAN4-220ENST00000532375 OR6J1Q8NGC5 347 aa15.98■□□□□ 0.15
TSPAN4-220ENST00000532375 EMID1Q96A84 441 aaPredicted RBP15.98■□□□□ 0.15
TSPAN4-220ENST00000532375 ANO3Q9BYT9 981 aa15.98■□□□□ 0.15
TSPAN4-220ENST00000532375 GLT8D2Q9H1C3 349 aa15.98■□□□□ 0.15
TSPAN4-220ENST00000532375 MRVI1Q9Y6F6 885 aa15.98■□□□□ 0.15
TSPAN4-220ENST00000532375 SPDYE3A6NKU9 549 aa15.97■□□□□ 0.15
TSPAN4-220ENST00000532375 M0R2N6 131 aa15.97■□□□□ 0.15
TSPAN4-220ENST00000532375 EVI5O60447 810 aa15.97■□□□□ 0.15
TSPAN4-220ENST00000532375 GH1P01241 217 aa15.97■□□□□ 0.15
TSPAN4-220ENST00000532375 RTP1P59025 263 aa15.97■□□□□ 0.15
TSPAN4-220ENST00000532375 CELF3Q5SZQ8 465 aaKnown RBP15.97■□□□□ 0.15
TSPAN4-220ENST00000532375 JAKMIP3Q5VZ66 844 aa15.97■□□□□ 0.15
TSPAN4-220ENST00000532375 KCNV1Q6PIU1 500 aa15.97■□□□□ 0.15
TSPAN4-220ENST00000532375 CPLX2Q6PUV4 134 aaKnown RBP15.97■□□□□ 0.15
TSPAN4-220ENST00000532375 TRIM22Q8IYM9 498 aa15.97■□□□□ 0.15
TSPAN4-220ENST00000532375 NSUN7Q8NE18 718 aaKnown RBP15.97■□□□□ 0.15
TSPAN4-220ENST00000532375 C6orf50Q9HD87 102 aa15.97■□□□□ 0.15
TSPAN4-220ENST00000532375 LIMCH1Q9UPQ0 1083 aa15.97■□□□□ 0.15
TSPAN4-220ENST00000532375 CD2BP2O95400 341 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms