RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 UBE2OQ9C0C9 1292 aaKnown RBP26.48■■□□□ 1.83
CAPN1-222ENST00000532285 CCDC196A0A1B0GTZ2 297 aa26.47■■□□□ 1.83
CAPN1-222ENST00000532285 TRIM43BA6NCK2 446 aa26.47■■□□□ 1.83
CAPN1-222ENST00000532285 A6NJR5 290 aa26.47■■□□□ 1.83
CAPN1-222ENST00000532285 METAP2P50579 478 aaKnown RBP eCLIP26.47■■□□□ 1.833e-8■■■■■ 34.2
CAPN1-222ENST00000532285 FAAP100Q0VG06 881 aa26.47■■□□□ 1.83
CAPN1-222ENST00000532285 FUT2Q10981 343 aa26.47■■□□□ 1.83
CAPN1-222ENST00000532285 RUFY3Q7L099 469 aa26.47■■□□□ 1.83
CAPN1-222ENST00000532285 SH3RF1Q7Z6J0 888 aa26.47■■□□□ 1.83
CAPN1-222ENST00000532285 TRIM43Q96BQ3 446 aaPredicted RBP26.47■■□□□ 1.83
CAPN1-222ENST00000532285 PSTPIP2Q9H939 334 aa26.47■■□□□ 1.83
CAPN1-222ENST00000532285 ZSWIM6Q9HCJ5 1215 aa26.47■■□□□ 1.83
CAPN1-222ENST00000532285 FAM217BQ9NTX9 383 aaPredicted RBP26.47■■□□□ 1.83
CAPN1-222ENST00000532285 FRMPD4Q14CM0 1322 aa26.46■■□□□ 1.83
CAPN1-222ENST00000532285 MEIS2O14770 477 aa26.46■■□□□ 1.83
CAPN1-222ENST00000532285 KPNA6O60684 536 aa26.46■■□□□ 1.83
CAPN1-222ENST00000532285 GH1P01241 217 aa26.46■■□□□ 1.83
CAPN1-222ENST00000532285 CDC27P30260 824 aa26.46■■□□□ 1.83
CAPN1-222ENST00000532285 ITGA7Q13683 1181 aa26.46■■□□□ 1.83
CAPN1-222ENST00000532285 KCNV1Q6PIU1 500 aa26.46■■□□□ 1.83
CAPN1-222ENST00000532285 USP17L6PQ6QN14 398 aa26.46■■□□□ 1.83
CAPN1-222ENST00000532285 HEATR3Q7Z4Q2 680 aa26.46■■□□□ 1.83
CAPN1-222ENST00000532285 SLC43A3Q8NBI5 491 aa26.46■■□□□ 1.83
CAPN1-222ENST00000532285 IL31RAQ8NI17 732 aa26.46■■□□□ 1.83
CAPN1-222ENST00000532285 TM6SF1Q9BZW5 370 aa26.46■■□□□ 1.83
CAPN1-222ENST00000532285 TMEM39AQ9NV64 488 aa26.46■■□□□ 1.83
CAPN1-222ENST00000532285 PCDH10Q9P2E7 1040 aa26.46■■□□□ 1.83
CAPN1-222ENST00000532285 DDX41Q9UJV9 622 aaKnown RBP26.46■■□□□ 1.83
CAPN1-222ENST00000532285 CYP46A1Q9Y6A2 500 aa26.46■■□□□ 1.83
CAPN1-222ENST00000532285 MRVI1Q9Y6F6 885 aa26.46■■□□□ 1.83
CAPN1-222ENST00000532285 KIAA0355O15063 1070 aa26.45■■□□□ 1.82
CAPN1-222ENST00000532285 MYL3P08590 195 aa26.45■■□□□ 1.82
CAPN1-222ENST00000532285 PURAQ00577 322 aaKnown RBP26.45■■□□□ 1.82
CAPN1-222ENST00000532285 V9GY48 417 aaPredicted RBP26.45■■□□□ 1.82
CAPN1-222ENST00000532285 TLR3O15455 904 aaKnown RBP26.44■■□□□ 1.82
CAPN1-222ENST00000532285 STAM2O75886 525 aa26.44■■□□□ 1.82
CAPN1-222ENST00000532285 RGS20O76081 388 aa26.44■■□□□ 1.82
CAPN1-222ENST00000532285 NID2Q14112 1375 aa26.44■■□□□ 1.82
CAPN1-222ENST00000532285 SCN10AQ9Y5Y9 1956 aa26.44■■□□□ 1.82
CAPN1-222ENST00000532285 EIF5BO60841 1220 aaKnown RBP26.43■■□□□ 1.82
CAPN1-222ENST00000532285 TGFB3P10600 412 aa26.43■■□□□ 1.82
CAPN1-222ENST00000532285 ADD1P35611 737 aaKnown RBP26.43■■□□□ 1.82
CAPN1-222ENST00000532285 FXR1P51114 621 aaKnown RBP eCLIP26.43■■□□□ 1.82
CAPN1-222ENST00000532285 ARHGAP1Q07960 439 aa26.43■■□□□ 1.82
CAPN1-222ENST00000532285 FAM126BQ8IXS8 530 aa26.43■■□□□ 1.82
CAPN1-222ENST00000532285 TDHQ8IZJ6 230 aa26.43■■□□□ 1.82
CAPN1-222ENST00000532285 GPKOWQ92917 476 aaPredicted RBP eCLIP26.43■■□□□ 1.82
CAPN1-222ENST00000532285 BADQ92934 168 aa26.43■■□□□ 1.82
CAPN1-222ENST00000532285 MTG1Q9BT17 334 aaPredicted RBP26.43■■□□□ 1.82
CAPN1-222ENST00000532285 GRIN2DO15399 1336 aa26.42■■□□□ 1.82
CAPN1-222ENST00000532285 hCG_1984214I3L0E3 225 aa26.42■■□□□ 1.82
CAPN1-222ENST00000532285 RAG1P15918 1043 aa26.42■■□□□ 1.82
CAPN1-222ENST00000532285 EVCP57679 992 aa26.42■■□□□ 1.82
CAPN1-222ENST00000532285 PSMC6P62333 389 aa26.42■■□□□ 1.82
CAPN1-222ENST00000532285 WWC2Q6AWC2 1192 aa26.42■■□□□ 1.82
CAPN1-222ENST00000532285 ZNF713Q8N859 430 aaPredicted RBP26.42■■□□□ 1.82
CAPN1-222ENST00000532285 AFG1LQ8WV93 481 aa26.42■■□□□ 1.82
CAPN1-222ENST00000532285 EMID1Q96A84 441 aaPredicted RBP26.42■■□□□ 1.82
CAPN1-222ENST00000532285 MRPS9P82933 396 aaKnown RBP26.41■■□□□ 1.82
CAPN1-222ENST00000532285 LAMC2Q13753 1193 aa26.41■■□□□ 1.82
CAPN1-222ENST00000532285 GNPTABQ3T906 1256 aa26.41■■□□□ 1.82
CAPN1-222ENST00000532285 PPP1R18Q6NYC8 613 aa26.41■■□□□ 1.82
CAPN1-222ENST00000532285 XRRA1Q6P2D8 792 aa26.41■■□□□ 1.82
CAPN1-222ENST00000532285 TEX2Q8IWB9 1127 aa26.41■■□□□ 1.82
CAPN1-222ENST00000532285 DHX37Q8IY37 1157 aaKnown RBP26.41■■□□□ 1.82
CAPN1-222ENST00000532285 TBX21Q9UL17 535 aa26.41■■□□□ 1.82
CAPN1-222ENST00000532285 CD4P01730 458 aa26.4■■□□□ 1.82
CAPN1-222ENST00000532285 NAPAP54920 295 aa26.4■■□□□ 1.82
CAPN1-222ENST00000532285 PCNX4Q63HM2 1172 aa26.4■■□□□ 1.82
CAPN1-222ENST00000532285 MMP3P08254 477 aa26.39■■□□□ 1.82
CAPN1-222ENST00000532285 ITGB8P26012 769 aa26.39■■□□□ 1.82
CAPN1-222ENST00000532285 PDIA3P30101 505 aaKnown RBP26.39■■□□□ 1.82
CAPN1-222ENST00000532285 TOB2Q14106 344 aaPredicted RBP26.39■■□□□ 1.82
CAPN1-222ENST00000532285 ZFP91Q96JP5 570 aaPredicted RBP26.39■■□□□ 1.82
CAPN1-222ENST00000532285 INPP4AQ96PE3 977 aaPredicted RBP26.39■■□□□ 1.82
CAPN1-222ENST00000532285 BARHL2Q9NY43 387 aa26.39■■□□□ 1.82
CAPN1-222ENST00000532285 DOCK5Q9H7D0 1870 aa26.38■■□□□ 1.81
CAPN1-222ENST00000532285 SPDYE3A6NKU9 549 aa26.38■■□□□ 1.81
CAPN1-222ENST00000532285 STXBP3O00186 592 aa26.38■■□□□ 1.81
CAPN1-222ENST00000532285 TIMP1P01033 207 aa26.38■■□□□ 1.81
CAPN1-222ENST00000532285 DGKDQ16760 1214 aa26.38■■□□□ 1.81
CAPN1-222ENST00000532285 UBE2SQ16763 222 aa26.38■■□□□ 1.81
CAPN1-222ENST00000532285 CELF3Q5SZQ8 465 aaKnown RBP26.38■■□□□ 1.81
CAPN1-222ENST00000532285 PPTC7Q8NI37 304 aa26.38■■□□□ 1.81
CAPN1-222ENST00000532285 UPF3BQ9BZI7 483 aaKnown RBP26.38■■□□□ 1.81
CAPN1-222ENST00000532285 RIC8AQ9NPQ8 531 aa26.38■■□□□ 1.81
CAPN1-222ENST00000532285 ICAM3P32942 547 aa26.37■■□□□ 1.81
CAPN1-222ENST00000532285 ANAPC15P60006 121 aa26.37■■□□□ 1.81
CAPN1-222ENST00000532285 SP2Q02086 613 aa26.37■■□□□ 1.81
CAPN1-222ENST00000532285 PFKFB3Q16875 520 aaPredicted RBP26.37■■□□□ 1.81
CAPN1-222ENST00000532285 NBPF20Q3BBV1 942 aa26.37■■□□□ 1.81
CAPN1-222ENST00000532285 MYSM1Q5VVJ2 828 aa26.37■■□□□ 1.81
CAPN1-222ENST00000532285 TYW1BQ6NUM6 668 aa26.37■■□□□ 1.81
CAPN1-222ENST00000532285 GLT8D2Q9H1C3 349 aa26.37■■□□□ 1.81
CAPN1-222ENST00000532285 ALDH8A1Q9H2A2 487 aaPredicted RBP26.37■■□□□ 1.81
CAPN1-222ENST00000532285 EHMT1Q9H9B1 1298 aa26.37■■□□□ 1.81
CAPN1-222ENST00000532285 PDRG1Q9NUG6 133 aa26.37■■□□□ 1.81
CAPN1-222ENST00000532285 RTEL1Q9NZ71 1219 aa26.37■■□□□ 1.81
CAPN1-222ENST00000532285 PRPF3O43395 683 aaKnown RBP26.36■■□□□ 1.81
CAPN1-222ENST00000532285 GGPS1O95749 300 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms