RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 K7ELQ4 463 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 PEX14O75381 377 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 CNMDO75829 334 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 S100BP04271 92 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 CYP21A2P08686 494 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 TOP1P11387 765 aaKnown RBP6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 BMP3P12645 472 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 MCCP23508 829 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 GNA15P30679 374 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 NOVP48745 357 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 TRDNQ13061 729 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 IKQ13123 557 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 PLS1Q14651 629 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 MSS51Q4VC12 460 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 CCDC178Q5BJE1 867 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 WDR78Q5VTH9 848 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 DGKHQ86XP1 1220 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 MCF2L2Q86YR7 1114 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 ZNF687Q8N1G0 1237 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 PRPF38AQ8NAV1 312 aaKnown RBP6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 ANKK1Q8NFD2 765 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 ADAM32Q8TC27 787 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 SH3TC2Q8TF17 1288 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 SOCS4Q8WXH5 440 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 KIFC2Q96AC6 838 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 CHMP4CQ96CF2 233 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 ATG4CQ96DT6 458 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 GMCL1Q96IK5 515 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 TTC14Q96N46 770 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 NUDT12Q9BQG2 462 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 SLF1Q9BQI6 1058 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 TMEM47Q9BQJ4 181 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 ZKSCAN3Q9BRR0 538 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 UBAC1Q9BSL1 405 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 IRF2BPLQ9H1B7 796 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 PORCNQ9H237 461 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 ZSWIM5Q9P217 1185 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 FEM1BQ9UK73 627 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 PPP1R9AQ9ULJ8 1098 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 GABRQQ9UN88 632 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 CTDP1Q9Y5B0 961 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 TMEM232C9JQI7 657 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 VWA5AO00534 786 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 ADCY3O60266 1144 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 ZBED4O75132 1171 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 MPSTP25325 297 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 GRK4P32298 578 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 STAT2P52630 851 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 TMEM132BQ14DG7 1078 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 CCDC96Q2M329 555 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 PLEKHG6Q3KR16 790 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 RCSD1Q6JBY9 416 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 POTEGQ6S5H5 508 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 HS2ST1Q7LGA3 356 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 GPR142Q7Z601 462 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 PLEKHH3Q7Z736 793 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 RALYLQ86SE5 291 aaKnown RBP6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 ZBTB33Q86T24 672 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 FAM160B2Q86V87 743 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 NCAPG2Q86XI2 1143 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 NKX2-3Q8TAU0 364 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 FBF1Q8TES7 1133 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 CHURC1Q8WUH1 139 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 DCAF4Q8WV16 495 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 ZNF333Q96JL9 665 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 ZSCAN10Q96SZ4 725 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 OCSTAMPQ9BR26 566 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 MOV10L1Q9BXT6 1211 aaKnown RBP6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 LSG1Q9H089 658 aaKnown RBP6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 SPATC1LQ9H0A9 340 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 MROH8Q9H579 483 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 KAT14Q9H8E8 782 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 GJD2Q9UKL4 321 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 ADAMTS5Q9UNA0 930 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 RBM8AQ9Y5S9 174 aaKnown RBP6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 TNKSO95271 1327 aa6.75□□□□□ -1.33
HMGB1P42-201ENST00000532126 SLC15A5A6NIM6 579 aa6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 E7EWF7 191 aa6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 DXOO77932 396 aaKnown RBP6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 SLC25A27O95847 323 aa6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 MYCP01106 439 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 ELNP15502 786 aa6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 CYP2B6P20813 491 aa6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 IGFBP4P22692 258 aa6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 STAT3P40763 770 aa6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 RGS2P41220 211 aa6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 SOX10P56693 466 aa6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 UBXN2AP68543 259 aa6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 USP4Q13107 963 aa6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 NAA30Q147X3 362 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 KCTD1Q719H9 257 aa6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 CPXCR1Q8N123 301 aa6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 ENAHQ8N8S7 591 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 SHCBP1Q8NEM2 672 aa6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 NCOA7Q8NI08 942 aa6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 ANKS1AQ92625 1134 aa6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 FAM129BQ96TA1 746 aa6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 TEX13BQ9BXU2 312 aa6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 UBA5Q9GZZ9 404 aa6.74□□□□□ -1.33
HMGB1P42-201ENST00000532126 GREB1LQ9C091 1923 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms