RNA–Protein interactions for RNA: ENST00000531910.6

PAX6-224, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-224ENST00000531910 UPF3AQ9H1J1 476 aaKnown RBP12.88□□□□□ -0.35
PAX6-224ENST00000531910 PDGFCQ9NRA1 345 aa12.88□□□□□ -0.35
PAX6-224ENST00000531910 COL20A1Q9P218 1284 aa12.88□□□□□ -0.35
PAX6-224ENST00000531910 PHF24Q9UPV7 400 aa12.88□□□□□ -0.35
PAX6-224ENST00000531910 GNEQ9Y223 722 aaKnown RBP12.88□□□□□ -0.35
PAX6-224ENST00000531910 SNX14Q9Y5W7 946 aa12.88□□□□□ -0.35
PAX6-224ENST00000531910 PNMA6FA0A0J9YX94 578 aa12.87□□□□□ -0.35
PAX6-224ENST00000531910 KLHL33A6NCF5 533 aa12.87□□□□□ -0.35
PAX6-224ENST00000531910 MYADML2A6NDP7 307 aa12.87□□□□□ -0.35
PAX6-224ENST00000531910 EPB41L2O43491 1005 aaKnown RBP12.87□□□□□ -0.35
PAX6-224ENST00000531910 COQ9O75208 318 aa12.87□□□□□ -0.35
PAX6-224ENST00000531910 PLEKHA8P1O95397 391 aa12.87□□□□□ -0.35
PAX6-224ENST00000531910 LIG1P18858 919 aa12.87□□□□□ -0.35
PAX6-224ENST00000531910 CST5P28325 142 aaPredicted RBP12.87□□□□□ -0.35
PAX6-224ENST00000531910 SMARCA1P28370 1054 aa12.87□□□□□ -0.35
PAX6-224ENST00000531910 GTF2A1P52655 376 aaPredicted RBP12.87□□□□□ -0.35
PAX6-224ENST00000531910 ATN1P54259 1190 aaPredicted RBP12.87□□□□□ -0.35
PAX6-224ENST00000531910 TNFAIP2Q03169 654 aa12.87□□□□□ -0.35
PAX6-224ENST00000531910 CCSAPQ6IQ19 270 aaPredicted RBP12.87□□□□□ -0.35
PAX6-224ENST00000531910 FSD2A1L4K1 749 aa12.87□□□□□ -0.35
PAX6-224ENST00000531910 SMPD1P17405 629 aa12.87□□□□□ -0.35
PAX6-224ENST00000531910 GNAQP50148 359 aa12.87□□□□□ -0.35
PAX6-224ENST00000531910 HSD17B4P51659 736 aa12.87□□□□□ -0.35
PAX6-224ENST00000531910 GJA9P57773 515 aa12.87□□□□□ -0.35
PAX6-224ENST00000531910 NKX3-2P78367 333 aa12.87□□□□□ -0.35
PAX6-224ENST00000531910 TRAF1Q13077 416 aa12.87□□□□□ -0.35
PAX6-224ENST00000531910 APOA5Q6Q788 366 aa12.87□□□□□ -0.35
PAX6-224ENST00000531910 MICU3Q86XE3 530 aa12.87□□□□□ -0.35
PAX6-224ENST00000531910 RAB11FIP4Q86YS3 637 aa12.87□□□□□ -0.35
PAX6-224ENST00000531910 SRBD1Q8N5C6 995 aaKnown RBP12.87□□□□□ -0.35
PAX6-224ENST00000531910 JAKMIP1Q96N16 626 aaKnown RBP12.87□□□□□ -0.35
PAX6-224ENST00000531910 MPHOSPH6Q99547 160 aaKnown RBP12.87□□□□□ -0.35
PAX6-224ENST00000531910 LZTS2Q9BRK4 669 aa12.87□□□□□ -0.35
PAX6-224ENST00000531910 TSEN34Q9BSV6 310 aaKnown RBP12.87□□□□□ -0.35
PAX6-224ENST00000531910 GOLGA6CA6NDK9 693 aa12.86□□□□□ -0.35
PAX6-224ENST00000531910 GOLGA6BA6NDN3 693 aa12.86□□□□□ -0.35
PAX6-224ENST00000531910 PPP1R12AO14974 1030 aaPredicted RBP12.86□□□□□ -0.35
PAX6-224ENST00000531910 CFBP00751 764 aa12.86□□□□□ -0.35
PAX6-224ENST00000531910 C6orf222P0C671 652 aaPredicted RBP12.86□□□□□ -0.35
PAX6-224ENST00000531910 GOLGA6DP0CG33 693 aa12.86□□□□□ -0.35
PAX6-224ENST00000531910 CPA1P15085 419 aa12.86□□□□□ -0.35
PAX6-224ENST00000531910 GABPB1Q06547 395 aaPredicted RBP12.86□□□□□ -0.35
PAX6-224ENST00000531910 PDE4DQ08499 809 aa12.86□□□□□ -0.35
PAX6-224ENST00000531910 SNX17Q15036 470 aa12.86□□□□□ -0.35
PAX6-224ENST00000531910 IQSEC1Q6DN90 963 aa12.86□□□□□ -0.35
PAX6-224ENST00000531910 SLC39A5Q6ZMH5 540 aa12.86□□□□□ -0.35
PAX6-224ENST00000531910 NOL8Q76FK4 1167 aaKnown RBP12.86□□□□□ -0.35
PAX6-224ENST00000531910 FANCBQ8NB91 859 aa12.86□□□□□ -0.35
PAX6-224ENST00000531910 PIBF1Q8WXW3 757 aa12.86□□□□□ -0.35
PAX6-224ENST00000531910 FERMT2Q96AC1 680 aa12.86□□□□□ -0.35
PAX6-224ENST00000531910 TAAR1Q96RJ0 339 aa12.86□□□□□ -0.35
PAX6-224ENST00000531910 GOLGA6AQ9NYA3 693 aa12.86□□□□□ -0.35
PAX6-224ENST00000531910 A0A1W2PQ45 241 aaPredicted RBP12.85□□□□□ -0.35
PAX6-224ENST00000531910 A0A1W2PQY0 241 aa12.85□□□□□ -0.35
PAX6-224ENST00000531910 MOXD2PA6NHM9 499 aa12.85□□□□□ -0.35
PAX6-224ENST00000531910 PTGS1P23219 599 aa12.85□□□□□ -0.35
PAX6-224ENST00000531910 ACLYP53396 1101 aa12.85□□□□□ -0.35
PAX6-224ENST00000531910 RTP1P59025 263 aa12.85□□□□□ -0.35
PAX6-224ENST00000531910 TMEM63BQ5T3F8 832 aa12.85□□□□□ -0.35
PAX6-224ENST00000531910 TMTC3Q6ZXV5 915 aa12.85□□□□□ -0.35
PAX6-224ENST00000531910 TLK2Q86UE8 772 aa12.85□□□□□ -0.35
PAX6-224ENST00000531910 CMTR1Q8N1G2 835 aaKnown RBP12.85□□□□□ -0.35
PAX6-224ENST00000531910 NSUN6Q8TEA1 469 aaKnown RBP12.85□□□□□ -0.35
PAX6-224ENST00000531910 RRP36Q96EU6 259 aaKnown RBP12.85□□□□□ -0.35
PAX6-224ENST00000531910 SPC25Q9HBM1 224 aa12.85□□□□□ -0.35
PAX6-224ENST00000531910 MAP3K20Q9NYL2 800 aaKnown RBP12.85□□□□□ -0.35
PAX6-224ENST00000531910 ZMYND8Q9ULU4 1186 aaPredicted RBP12.85□□□□□ -0.35
PAX6-224ENST00000531910 RANBP2P49792 3224 aaKnown RBP12.85□□□□□ -0.35
PAX6-224ENST00000531910 RBM47A0AV96 593 aaKnown RBP12.85□□□□□ -0.35
PAX6-224ENST00000531910 B4DLN1 442 aa12.85□□□□□ -0.35
PAX6-224ENST00000531910 MRE11P49959 708 aa12.85□□□□□ -0.35
PAX6-224ENST00000531910 MRPL12P52815 198 aaKnown RBP12.85□□□□□ -0.35
PAX6-224ENST00000531910 KCNA10Q16322 511 aa12.85□□□□□ -0.35
PAX6-224ENST00000531910 SWT1Q5T5J6 900 aaKnown RBP12.85□□□□□ -0.35
PAX6-224ENST00000531910 C1orf53Q5VUE5 145 aa12.85□□□□□ -0.35
PAX6-224ENST00000531910 BLOC1S2Q6QNY1 142 aa12.85□□□□□ -0.35
PAX6-224ENST00000531910 CHRDL2Q6WN34 429 aa12.85□□□□□ -0.35
PAX6-224ENST00000531910 SYNE3Q6ZMZ3 975 aa12.85□□□□□ -0.35
PAX6-224ENST00000531910 SAMD3Q8N6K7 520 aa12.85□□□□□ -0.35
PAX6-224ENST00000531910 RMDN3Q96TC7 470 aa12.85□□□□□ -0.35
PAX6-224ENST00000531910 USP26Q9BXU7 913 aa12.85□□□□□ -0.35
PAX6-224ENST00000531910 SUDS3Q9H7L9 328 aaPredicted RBP12.85□□□□□ -0.35
PAX6-224ENST00000531910 COLQQ9Y215 455 aaPredicted RBP12.85□□□□□ -0.35
PAX6-224ENST00000531910 Q9Y3F1 56 aa12.85□□□□□ -0.35
PAX6-224ENST00000531910 SYN1P17600 705 aa12.84□□□□□ -0.35
PAX6-224ENST00000531910 HOXA13P31271 388 aaPredicted RBP12.84□□□□□ -0.35
PAX6-224ENST00000531910 DUSP28Q4G0W2 176 aa12.84□□□□□ -0.35
PAX6-224ENST00000531910 ZC3H12AQ5D1E8 599 aaKnown RBP12.84□□□□□ -0.35
PAX6-224ENST00000531910 GNASQ5JWF2 1037 aa12.84□□□□□ -0.35
PAX6-224ENST00000531910 CREBRFQ8IUR6 639 aa12.84□□□□□ -0.35
PAX6-224ENST00000531910 PCSK9Q8NBP7 692 aaKnown RBP12.84□□□□□ -0.35
PAX6-224ENST00000531910 IWS1Q96ST2 819 aa12.84□□□□□ -0.35
PAX6-224ENST00000531910 WDR11Q9BZH6 1224 aa12.84□□□□□ -0.35
PAX6-224ENST00000531910 PXMP2Q9NR77 195 aa12.84□□□□□ -0.35
PAX6-224ENST00000531910 SEC63Q9UGP8 760 aaKnown RBP12.84□□□□□ -0.35
PAX6-224ENST00000531910 KLF18A0A0U1RQI7 1052 aa12.83□□□□□ -0.35
PAX6-224ENST00000531910 DYNC1LI2O43237 492 aaPredicted RBP12.83□□□□□ -0.35
PAX6-224ENST00000531910 ZBTB43O43298 467 aa12.83□□□□□ -0.35
PAX6-224ENST00000531910 IPO7O95373 1038 aaKnown RBP12.83□□□□□ -0.35
PAX6-224ENST00000531910 ASGR1P07306 291 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms