RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	VAMP1	P23763	118 aa		7.5	□□□□□ -1.21
PUM1-222	ENST00000531867	TM4SF4	P48230	202 aa		7.5	□□□□□ -1.21
PUM1-222	ENST00000531867	PIP4K2A	P48426	406 aa	Predicted RBP	7.5	□□□□□ -1.21
PUM1-222	ENST00000531867	PTPN11	Q06124	597 aa	Predicted RBP	7.5	□□□□□ -1.21
PUM1-222	ENST00000531867	TEF	Q10587	303 aa		7.5	□□□□□ -1.21
PUM1-222	ENST00000531867	INPP5A	Q14642	412 aa		7.5	□□□□□ -1.21
PUM1-222	ENST00000531867	INTS3	Q68E01	1043 aa	Known RBP	7.5	□□□□□ -1.21
PUM1-222	ENST00000531867	KRT26	Q7Z3Y9	468 aa		7.5	□□□□□ -1.21
PUM1-222	ENST00000531867	RASAL3	Q86YV0	1011 aa		7.5	□□□□□ -1.21
PUM1-222	ENST00000531867	SUPT20H	Q8NEM7	779 aa		7.5	□□□□□ -1.21
PUM1-222	ENST00000531867	NETO1	Q8TDF5	533 aa		7.5	□□□□□ -1.21
PUM1-222	ENST00000531867	RBM17	Q96I25	401 aa	Known RBP	7.5	□□□□□ -1.21
PUM1-222	ENST00000531867	NYX	Q9GZU5	481 aa		7.5	□□□□□ -1.21
PUM1-222	ENST00000531867	GTF2IRD1	Q9UHL9	959 aa		7.5	□□□□□ -1.21
PUM1-222	ENST00000531867	HDAC9	Q9UKV0	1011 aa		7.5	□□□□□ -1.21
PUM1-222	ENST00000531867	OAS3	Q9Y6K5	1087 aa	Known RBP	7.5	□□□□□ -1.21
PUM1-222	ENST00000531867	PAPPA2	Q9BXP8	1791 aa		7.5	□□□□□ -1.21
PUM1-222	ENST00000531867	MKI67	P46013	3256 aa	Known RBP	7.49	□□□□□ -1.21
PUM1-222	ENST00000531867	PRAMEF22	A3QJZ6	481 aa		7.49	□□□□□ -1.21
PUM1-222	ENST00000531867	GNAT3	A8MTJ3	354 aa		7.49	□□□□□ -1.21
PUM1-222	ENST00000531867	ERVV-1	B6SEH8	477 aa		7.49	□□□□□ -1.21
PUM1-222	ENST00000531867	ADAMTS4	O75173	837 aa		7.49	□□□□□ -1.21
PUM1-222	ENST00000531867	LEFTY1	O75610	366 aa		7.49	□□□□□ -1.21
PUM1-222	ENST00000531867	LRIG2	O94898	1065 aa		7.49	□□□□□ -1.21
PUM1-222	ENST00000531867	TBC1D8	O95759	1140 aa		7.49	□□□□□ -1.21
PUM1-222	ENST00000531867	SNRPA1	P09661	255 aa	Known RBP	7.49	□□□□□ -1.21
PUM1-222	ENST00000531867	IRAK1	P51617	712 aa		7.49	□□□□□ -1.21
PUM1-222	ENST00000531867	ETF1	P62495	437 aa	Known RBP	7.49	□□□□□ -1.21
PUM1-222	ENST00000531867	FKBP1B	P68106	108 aa		7.49	□□□□□ -1.21
PUM1-222	ENST00000531867	PWP1	Q13610	501 aa		7.49	□□□□□ -1.21
PUM1-222	ENST00000531867	SEPT6	Q14141	434 aa		7.49	□□□□□ -1.21
PUM1-222	ENST00000531867	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	7.49	□□□□□ -1.21
PUM1-222	ENST00000531867	CCDC84	Q86UT8	332 aa	Predicted RBP	7.49	□□□□□ -1.21
PUM1-222	ENST00000531867	MORC1	Q86VD1	984 aa		7.49	□□□□□ -1.21
PUM1-222	ENST00000531867	RPGR	Q92834	1020 aa	Known RBP	7.49	□□□□□ -1.21
PUM1-222	ENST00000531867	WNT10A	Q9GZT5	417 aa		7.49	□□□□□ -1.21
PUM1-222	ENST00000531867	ADM5	C9JUS6	153 aa		7.48	□□□□□ -1.21
PUM1-222	ENST00000531867	RAD17	O75943	681 aa		7.48	□□□□□ -1.21
PUM1-222	ENST00000531867	CAP2	P40123	477 aa		7.48	□□□□□ -1.21
PUM1-222	ENST00000531867	IFI16	Q16666	785 aa	Known RBP	7.48	□□□□□ -1.21
PUM1-222	ENST00000531867	TSNAXIP1	Q2TAA8	658 aa		7.48	□□□□□ -1.21
PUM1-222	ENST00000531867	ARMCX6	Q7L4S7	300 aa		7.48	□□□□□ -1.21
PUM1-222	ENST00000531867	SP8	Q8IXZ3	490 aa		7.48	□□□□□ -1.21
PUM1-222	ENST00000531867	AGBL5	Q8NDL9	886 aa		7.48	□□□□□ -1.21
PUM1-222	ENST00000531867	PHC3	Q8NDX5	983 aa		7.48	□□□□□ -1.21
PUM1-222	ENST00000531867	FLCN	Q8NFG4	579 aa		7.48	□□□□□ -1.21
PUM1-222	ENST00000531867	PANK3	Q9H999	370 aa		7.48	□□□□□ -1.21
PUM1-222	ENST00000531867	SLC5A6	Q9Y289	635 aa		7.48	□□□□□ -1.21
PUM1-222	ENST00000531867	PCDHB5	Q9Y5E4	795 aa		7.48	□□□□□ -1.21
PUM1-222	ENST00000531867	KIAA0100	Q14667	2235 aa	Known RBP	7.48	□□□□□ -1.21
PUM1-222	ENST00000531867	ANKRD36C	Q5JPF3	1778 aa		7.48	□□□□□ -1.21
PUM1-222	ENST00000531867	DUOX1	Q9NRD9	1551 aa		7.47	□□□□□ -1.21
PUM1-222	ENST00000531867	BTBD11	A6QL63	1104 aa		7.47	□□□□□ -1.21
PUM1-222	ENST00000531867	IGF2BP3	O00425	579 aa	Known RBP eCLIP	7.47	□□□□□ -1.21
PUM1-222	ENST00000531867	CEACAM5	P06731	702 aa		7.47	□□□□□ -1.21
PUM1-222	ENST00000531867	TFE3	P19532	575 aa	Predicted RBP	7.47	□□□□□ -1.21
PUM1-222	ENST00000531867	RPS12	P25398	132 aa	Known RBP	7.47	□□□□□ -1.21
PUM1-222	ENST00000531867	TAGLN	Q01995	201 aa	Known RBP	7.47	□□□□□ -1.21
PUM1-222	ENST00000531867	SLC10A5	Q5PT55	438 aa		7.47	□□□□□ -1.21
PUM1-222	ENST00000531867	HID1	Q8IV36	788 aa		7.47	□□□□□ -1.21
PUM1-222	ENST00000531867	ZNF34	Q8IZ26	560 aa		7.47	□□□□□ -1.21
PUM1-222	ENST00000531867	DCPS	Q96C86	337 aa	Known RBP	7.47	□□□□□ -1.21
PUM1-222	ENST00000531867	FOXQ1	Q9C009	403 aa		7.47	□□□□□ -1.21
PUM1-222	ENST00000531867	UBN2	Q6ZU65	1347 aa		7.47	□□□□□ -1.21
PUM1-222	ENST00000531867	SZT2	Q5T011	3432 aa		7.46	□□□□□ -1.21
PUM1-222	ENST00000531867	PSMD14	O00487	310 aa		7.46	□□□□□ -1.22
PUM1-222	ENST00000531867	FKTN	O75072	461 aa		7.46	□□□□□ -1.22
PUM1-222	ENST00000531867	BBOX1	O75936	387 aa		7.46	□□□□□ -1.22
PUM1-222	ENST00000531867	NTSR2	O95665	410 aa		7.46	□□□□□ -1.22
PUM1-222	ENST00000531867	RPL6	Q02878	288 aa	Known RBP	7.46	□□□□□ -1.22
PUM1-222	ENST00000531867	PDE4B	Q07343	736 aa		7.46	□□□□□ -1.22
PUM1-222	ENST00000531867	SUSD4	Q5VX71	490 aa		7.46	□□□□□ -1.22
PUM1-222	ENST00000531867	MCTP1	Q6DN14	999 aa		7.46	□□□□□ -1.22
PUM1-222	ENST00000531867	DPP8	Q6V1X1	898 aa	Predicted RBP	7.46	□□□□□ -1.22
PUM1-222	ENST00000531867	UBE3D	Q7Z6J8	389 aa		7.46	□□□□□ -1.22
PUM1-222	ENST00000531867	TP53INP2	Q8IXH6	220 aa		7.46	□□□□□ -1.22
PUM1-222	ENST00000531867	PLD6	Q8N2A8	252 aa	Known RBP	7.46	□□□□□ -1.22
PUM1-222	ENST00000531867	FAM181A	Q8N9Y4	354 aa		7.46	□□□□□ -1.22
PUM1-222	ENST00000531867	SLC17A8	Q8NDX2	589 aa		7.46	□□□□□ -1.22
PUM1-222	ENST00000531867	ARMC5	Q96C12	935 aa		7.46	□□□□□ -1.22
PUM1-222	ENST00000531867	CDCA5	Q96FF9	252 aa		7.46	□□□□□ -1.22
PUM1-222	ENST00000531867	R3HDML	Q9H3Y0	253 aa		7.46	□□□□□ -1.22
PUM1-222	ENST00000531867	LRRC37A	A6NMS7	1700 aa		7.46	□□□□□ -1.22
PUM1-222	ENST00000531867	ABCC4	O15439	1325 aa		7.46	□□□□□ -1.22
PUM1-222	ENST00000531867	MAP3K15	Q6ZN16	1313 aa		7.46	□□□□□ -1.22
PUM1-222	ENST00000531867	LAMB4	A4D0S4	1761 aa		7.46	□□□□□ -1.22
PUM1-222	ENST00000531867	LAMB1	P07942	1786 aa		7.46	□□□□□ -1.22
PUM1-222	ENST00000531867	LAMB2	P55268	1798 aa		7.46	□□□□□ -1.22
PUM1-222	ENST00000531867	ZNF609	O15014	1411 aa		7.45	□□□□□ -1.22
PUM1-222	ENST00000531867	TRIOBP	Q9H2D6	2365 aa		7.45	□□□□□ -1.22
PUM1-222	ENST00000531867	TMEM265	A0A087WTH1	108 aa		7.45	□□□□□ -1.22
PUM1-222	ENST00000531867	GFRA2	O00451	464 aa		7.45	□□□□□ -1.22
PUM1-222	ENST00000531867	TCERG1	O14776	1098 aa	Known RBP	7.45	□□□□□ -1.22
PUM1-222	ENST00000531867	BPNT1	O95861	308 aa		7.45	□□□□□ -1.22
PUM1-222	ENST00000531867	GRK4	P32298	578 aa		7.45	□□□□□ -1.22
PUM1-222	ENST00000531867	LMNB2	Q03252	620 aa		7.45	□□□□□ -1.22
PUM1-222	ENST00000531867	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	7.45	□□□□□ -1.22
PUM1-222	ENST00000531867	RELL1	Q8IUW5	271 aa		7.45	□□□□□ -1.22
PUM1-222	ENST00000531867	MFSD2A	Q8NA29	543 aa		7.45	□□□□□ -1.22
PUM1-222	ENST00000531867	BCL7C	Q8WUZ0	217 aa	Predicted RBP	7.45	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms