RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 SYTL5Q8TDW5 730 aaPredicted RBP22.27■■□□□ 1.16
UBXN1-212ENST00000531625 NSUN6Q8TEA1 469 aaKnown RBP22.27■■□□□ 1.16
UBXN1-212ENST00000531625 KAT2BQ92831 832 aa22.27■■□□□ 1.16
UBXN1-212ENST00000531625 IWS1Q96ST2 819 aa22.27■■□□□ 1.16
UBXN1-212ENST00000531625 UBA5Q9GZZ9 404 aa22.27■■□□□ 1.16
UBXN1-212ENST00000531625 ABCB11O95342 1321 aa22.27■■□□□ 1.16
UBXN1-212ENST00000531625 SELPP16109 830 aa22.26■■□□□ 1.15
UBXN1-212ENST00000531625 CASTP20810 708 aaKnown RBP22.26■■□□□ 1.15
UBXN1-212ENST00000531625 GRB10Q13322 594 aa22.26■■□□□ 1.15
UBXN1-212ENST00000531625 LY6KQ17RY6 165 aa22.26■■□□□ 1.15
UBXN1-212ENST00000531625 CCDC178Q5BJE1 867 aa22.26■■□□□ 1.15
UBXN1-212ENST00000531625 KRT40Q6A162 431 aa22.26■■□□□ 1.15
UBXN1-212ENST00000531625 GDF6Q6KF10 455 aaPredicted RBP22.26■■□□□ 1.15
UBXN1-212ENST00000531625 TBC1D5Q92609 795 aa22.26■■□□□ 1.15
UBXN1-212ENST00000531625 LPXNO60711 386 aa22.25■■□□□ 1.15
UBXN1-212ENST00000531625 CXCL10P02778 98 aa22.25■■□□□ 1.15
UBXN1-212ENST00000531625 MFAP1P55081 439 aaKnown RBP22.25■■□□□ 1.15
UBXN1-212ENST00000531625 CHMP4BP1P59074 171 aa22.25■■□□□ 1.15
UBXN1-212ENST00000531625 WDR5P61964 334 aaKnown RBP22.25■■□□□ 1.15
UBXN1-212ENST00000531625 STXBP2Q15833 593 aa22.25■■□□□ 1.15
UBXN1-212ENST00000531625 CDC37Q16543 378 aaPredicted RBP22.25■■□□□ 1.15
UBXN1-212ENST00000531625 SEPT14Q6ZU15 432 aa22.25■■□□□ 1.15
UBXN1-212ENST00000531625 MCF2L2Q86YR7 1114 aa22.25■■□□□ 1.15
UBXN1-212ENST00000531625 PNMA1Q8ND90 353 aa22.25■■□□□ 1.15
UBXN1-212ENST00000531625 ANKS1AQ92625 1134 aa22.25■■□□□ 1.15
UBXN1-212ENST00000531625 HLA-CQ95604 372 aa22.25■■□□□ 1.15
UBXN1-212ENST00000531625 EMID1Q96A84 441 aaPredicted RBP22.25■■□□□ 1.15
UBXN1-212ENST00000531625 TAAR1Q96RJ0 339 aa22.25■■□□□ 1.15
UBXN1-212ENST00000531625 CPVLQ9H3G5 476 aa22.25■■□□□ 1.15
UBXN1-212ENST00000531625 LMCD1Q9NZU5 365 aa22.25■■□□□ 1.15
UBXN1-212ENST00000531625 COL20A1Q9P218 1284 aa22.25■■□□□ 1.15
UBXN1-212ENST00000531625 NEDD4P46934 1319 aa22.25■■□□□ 1.15
UBXN1-212ENST00000531625 KIAA1217Q5T5P2 1943 aa22.24■■□□□ 1.15
UBXN1-212ENST00000531625 PLA2G5P39877 138 aa22.24■■□□□ 1.15
UBXN1-212ENST00000531625 DGKDQ16760 1214 aa22.24■■□□□ 1.15
UBXN1-212ENST00000531625 CNKSR3Q6P9H4 555 aa22.24■■□□□ 1.15
UBXN1-212ENST00000531625 LRRC8DQ7L1W4 858 aa22.24■■□□□ 1.15
UBXN1-212ENST00000531625 DHX38Q92620 1227 aaKnown RBP22.24■■□□□ 1.15
UBXN1-212ENST00000531625 RMDN3Q96TC7 470 aa22.24■■□□□ 1.15
UBXN1-212ENST00000531625 ZKSCAN3Q9BRR0 538 aa22.24■■□□□ 1.15
UBXN1-212ENST00000531625 GTF2IRD1Q9UHL9 959 aa22.24■■□□□ 1.15
UBXN1-212ENST00000531625 PTPRSQ13332 1948 aa22.23■■□□□ 1.15
UBXN1-212ENST00000531625 ASPRV1Q53RT3 343 aa22.23■■□□□ 1.15
UBXN1-212ENST00000531625 IQCA1Q86XH1 822 aa22.23■■□□□ 1.15
UBXN1-212ENST00000531625 ADGRF4Q8IZF3 695 aa22.23■■□□□ 1.15
UBXN1-212ENST00000531625 DDX41Q9UJV9 622 aaKnown RBP22.23■■□□□ 1.15
UBXN1-212ENST00000531625 MRPL11Q9Y3B7 192 aaKnown RBP22.23■■□□□ 1.15
UBXN1-212ENST00000531625 ABHD14A-ACY1A0A1B0GW23 586 aa22.22■■□□□ 1.15
UBXN1-212ENST00000531625 LCHNA4D1U4 455 aa22.22■■□□□ 1.15
UBXN1-212ENST00000531625 TRIM6-TRIM34B2RNG4 842 aa22.22■■□□□ 1.15
UBXN1-212ENST00000531625 ZNF213O14771 459 aa22.22■■□□□ 1.15
UBXN1-212ENST00000531625 EIF3JO75822 258 aaKnown RBP22.22■■□□□ 1.15
UBXN1-212ENST00000531625 CKBP12277 381 aa22.22■■□□□ 1.15
UBXN1-212ENST00000531625 CHST3Q7LGC8 479 aa22.22■■□□□ 1.15
UBXN1-212ENST00000531625 SPRED2Q7Z698 418 aa22.22■■□□□ 1.15
UBXN1-212ENST00000531625 SKAP1Q86WV1 359 aa22.22■■□□□ 1.15
UBXN1-212ENST00000531625 ZBED2Q9BTP6 218 aa22.22■■□□□ 1.15
UBXN1-212ENST00000531625 KATNAL1Q9BW62 490 aa22.22■■□□□ 1.15
UBXN1-212ENST00000531625 OSBPL3Q9H4L5 887 aa22.22■■□□□ 1.15
UBXN1-212ENST00000531625 KAT14Q9H8E8 782 aa22.22■■□□□ 1.15
UBXN1-212ENST00000531625 NBNO60934 754 aa22.21■■□□□ 1.15
UBXN1-212ENST00000531625 EFCAB14O75071 495 aa22.21■■□□□ 1.15
UBXN1-212ENST00000531625 GJB5O95377 273 aa22.21■■□□□ 1.15
UBXN1-212ENST00000531625 LAMC2Q13753 1193 aa22.21■■□□□ 1.15
UBXN1-212ENST00000531625 QRICH1Q2TAL8 776 aa22.21■■□□□ 1.15
UBXN1-212ENST00000531625 C7orf31Q8N865 590 aa22.21■■□□□ 1.15
UBXN1-212ENST00000531625 RAD9AQ99638 391 aa22.21■■□□□ 1.15
UBXN1-212ENST00000531625 HDAC6Q9UBN7 1215 aa22.21■■□□□ 1.15
UBXN1-212ENST00000531625 HAS3O00219 553 aa22.2■■□□□ 1.14
UBXN1-212ENST00000531625 KDM4AO75164 1064 aa22.2■■□□□ 1.14
UBXN1-212ENST00000531625 F2P00734 622 aa22.2■■□□□ 1.14
UBXN1-212ENST00000531625 SDSP20132 328 aa22.2■■□□□ 1.14
UBXN1-212ENST00000531625 PSEN2P49810 448 aa22.2■■□□□ 1.14
UBXN1-212ENST00000531625 DEFB103AP81534 67 aa22.2■■□□□ 1.14
UBXN1-212ENST00000531625 PTK7Q13308 1070 aa22.2■■□□□ 1.14
UBXN1-212ENST00000531625 ARHGEF16Q5VV41 709 aa22.2■■□□□ 1.14
UBXN1-212ENST00000531625 FBXO11Q86XK2 927 aa22.2■■□□□ 1.14
UBXN1-212ENST00000531625 PPTC7Q8NI37 304 aa22.2■■□□□ 1.14
UBXN1-212ENST00000531625 RILPL2Q969X0 211 aa22.2■■□□□ 1.14
UBXN1-212ENST00000531625 FAM122AQ96E09 287 aa22.2■■□□□ 1.14
UBXN1-212ENST00000531625 NR3C2P08235 984 aa22.19■■□□□ 1.14
UBXN1-212ENST00000531625 HOXD8P13378 290 aaPredicted RBP22.19■■□□□ 1.14
UBXN1-212ENST00000531625 ERVK-21P61565 698 aa22.19■■□□□ 1.14
UBXN1-212ENST00000531625 GHRHRQ02643 423 aa22.19■■□□□ 1.14
UBXN1-212ENST00000531625 TRIM71Q2Q1W2 868 aaKnown RBP22.19■■□□□ 1.14
UBXN1-212ENST00000531625 TMCO2Q7Z6W1 182 aaPredicted RBP22.19■■□□□ 1.14
UBXN1-212ENST00000531625 ENAHQ8N8S7 591 aaPredicted RBP22.19■■□□□ 1.14
UBXN1-212ENST00000531625 ZSCAN10Q96SZ4 725 aaPredicted RBP22.19■■□□□ 1.14
UBXN1-212ENST00000531625 JMJD4Q9H9V9 463 aa22.19■■□□□ 1.14
UBXN1-212ENST00000531625 PXMP2Q9NR77 195 aa22.19■■□□□ 1.14
UBXN1-212ENST00000531625 GTF3C3Q9Y5Q9 886 aa22.19■■□□□ 1.14
UBXN1-212ENST00000531625 MYH6P13533 1939 aa22.19■■□□□ 1.14
UBXN1-212ENST00000531625 PARP1P09874 1014 aaKnown RBP22.18■■□□□ 1.14
UBXN1-212ENST00000531625 EIF2AK2P19525 551 aaKnown RBP22.18■■□□□ 1.14
UBXN1-212ENST00000531625 IKBKEQ14164 716 aa22.18■■□□□ 1.14
UBXN1-212ENST00000531625 MFSD10Q14728 455 aa22.18■■□□□ 1.14
UBXN1-212ENST00000531625 KIAA0753Q2KHM9 967 aa22.18■■□□□ 1.14
UBXN1-212ENST00000531625 TCTN1Q2MV58 587 aa22.18■■□□□ 1.14
UBXN1-212ENST00000531625 TRAF7Q6Q0C0 670 aa22.18■■□□□ 1.14
UBXN1-212ENST00000531625 TGS1Q96RS0 853 aaKnown RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms