RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 GRM4Q14833 912 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 PKN1Q16512 942 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 TXNRD1Q16881 649 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 ARSJQ5FYB0 599 aaPredicted RBP6.34□□□□□ -1.39
PCF11-205ENST00000530906 NT5DC1Q5TFE4 455 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 ARL6IP4Q66PJ3 421 aaKnown RBP6.34□□□□□ -1.39
PCF11-205ENST00000530906 SHC4Q6S5L8 630 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 KRBA2Q6ZNG9 492 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 C16orf86Q6ZW13 317 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 CHSY3Q70JA7 882 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 TXNRD3Q86VQ6 643 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 AMIGO3Q86WK7 504 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 RAB11FIP4Q86YS3 637 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 CCDC144CPQ8IYA2 1237 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 ZNF444Q8N0Y2 327 aaPredicted RBP6.34□□□□□ -1.39
PCF11-205ENST00000530906 MLKLQ8NB16 471 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 TBC1D16Q8TBP0 767 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 PRIMPOLQ96LW4 560 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 AIFM3Q96NN9 605 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 EYA3Q99504 573 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 ZKSCAN3Q9BRR0 538 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 MRIQ9BWK5 157 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 SPZ1Q9BXG8 430 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 RTFDC1Q9BY42 306 aaPredicted RBP6.34□□□□□ -1.39
PCF11-205ENST00000530906 MKNK2Q9HBH9 465 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 INCENPQ9NQS7 918 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 FBXO2Q9UK22 296 aaPredicted RBP6.34□□□□□ -1.39
PCF11-205ENST00000530906 PCDHGA11Q9Y5H2 935 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 ANKRD31Q8N7Z5 1873 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 KHNYNO15037 678 aaKnown RBP6.33□□□□□ -1.4
PCF11-205ENST00000530906 TUBB4AP04350 444 aa6.33□□□□□ -1.4
PCF11-205ENST00000530906 MYL1P05976 194 aa6.33□□□□□ -1.4
PCF11-205ENST00000530906 FAM157BP0CG42 384 aa6.33□□□□□ -1.4
PCF11-205ENST00000530906 TSPY3P0CV98 308 aa6.33□□□□□ -1.4
PCF11-205ENST00000530906 TSPY8P0CW00 308 aa6.33□□□□□ -1.4
PCF11-205ENST00000530906 CHRNA4P43681 627 aa6.33□□□□□ -1.4
PCF11-205ENST00000530906 NOVP48745 357 aa6.33□□□□□ -1.4
PCF11-205ENST00000530906 TOB1P50616 345 aaPredicted RBP6.33□□□□□ -1.4
PCF11-205ENST00000530906 HDLBPQ00341 1268 aaKnown RBP6.33□□□□□ -1.4
PCF11-205ENST00000530906 TFAP4Q01664 338 aa6.33□□□□□ -1.4
PCF11-205ENST00000530906 MYL5Q02045 173 aa6.33□□□□□ -1.4
PCF11-205ENST00000530906 DDR1Q08345 913 aa6.33□□□□□ -1.4
PCF11-205ENST00000530906 NOLC1Q14978 699 aaKnown RBP eCLIP6.33□□□□□ -1.4
PCF11-205ENST00000530906 MFSD14BQ5SR56 506 aa6.33□□□□□ -1.4
PCF11-205ENST00000530906 RCSD1Q6JBY9 416 aa6.33□□□□□ -1.4
PCF11-205ENST00000530906 OLFM4Q6UX06 510 aa6.33□□□□□ -1.4
PCF11-205ENST00000530906 C11orf57Q6ZUT1 292 aaPredicted RBP6.33□□□□□ -1.4
PCF11-205ENST00000530906 TEX2Q8IWB9 1127 aa6.33□□□□□ -1.4
PCF11-205ENST00000530906 DHX40Q8IX18 779 aaKnown RBP6.33□□□□□ -1.4
PCF11-205ENST00000530906 DRC7Q8IY82 874 aa6.33□□□□□ -1.4
PCF11-205ENST00000530906 TEX11Q8IYF3 940 aa6.33□□□□□ -1.4
PCF11-205ENST00000530906 CNNM3Q8NE01 707 aa6.33□□□□□ -1.4
PCF11-205ENST00000530906 KIAA1524Q8TCG1 905 aa6.33□□□□□ -1.4
PCF11-205ENST00000530906 TNFRSF25Q93038 417 aa6.33□□□□□ -1.4
PCF11-205ENST00000530906 KCND1Q9NSA2 647 aa6.33□□□□□ -1.4
PCF11-205ENST00000530906 CLIP2Q9UDT6 1046 aa6.33□□□□□ -1.4
PCF11-205ENST00000530906 SWAP70Q9UH65 585 aa6.33□□□□□ -1.4
PCF11-205ENST00000530906 MYH1P12882 1939 aa6.33□□□□□ -1.4
PCF11-205ENST00000530906 FLT1P17948 1338 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 CYP2D7A0A087X1C5 515 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 ESYT2A0FGR8 921 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 WTIPA6NIX2 430 aaPredicted RBP6.32□□□□□ -1.4
PCF11-205ENST00000530906 KIF2AO00139 706 aaPredicted RBP6.32□□□□□ -1.4
PCF11-205ENST00000530906 PIK3CDO00329 1044 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 EFSO43281 561 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 PRDM1O75626 825 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 TRIM37O94972 964 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 SLFN14P0C7P3 912 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 SRGNP10124 158 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 TOP1P11387 765 aaKnown RBP6.32□□□□□ -1.4
PCF11-205ENST00000530906 RASA1P20936 1047 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 ERCC5P28715 1186 aaPredicted RBP6.32□□□□□ -1.4
PCF11-205ENST00000530906 MARCKSP29966 332 aaPredicted RBP6.32□□□□□ -1.4
PCF11-205ENST00000530906 GNA11P29992 359 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 GUCY1A2P33402 732 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 SOX11P35716 441 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 LONP1P36776 959 aaKnown RBP6.32□□□□□ -1.4
PCF11-205ENST00000530906 TXLNAP40222 546 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 PRPHP41219 470 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 BTDP43251 543 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 RHBDL3P58872 404 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 ATP2C1P98194 919 aaPredicted RBP6.32□□□□□ -1.4
PCF11-205ENST00000530906 POSTNQ15063 836 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 TPRNQ4KMQ1 711 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 TTC38Q5R3I4 469 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 SAMD5Q5TGI4 173 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 ZNF468Q5VIY5 522 aaPredicted RBP6.32□□□□□ -1.4
PCF11-205ENST00000530906 STYK1Q6J9G0 422 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 HHIPL2Q6UWX4 724 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 STK11IPQ8N1F8 1099 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 SRBD1Q8N5C6 995 aaKnown RBP6.32□□□□□ -1.4
PCF11-205ENST00000530906 AOPEPQ8N6M6 819 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 CCDC150Q8NCX0 1101 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 SPATA20Q8TB22 786 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 SH3RF3Q8TEJ3 882 aaPredicted RBP6.32□□□□□ -1.4
PCF11-205ENST00000530906 TGFBRAP1Q8WUH2 860 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 TRIM11Q96F44 468 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 MASTLQ96GX5 879 aa6.32□□□□□ -1.4
PCF11-205ENST00000530906 NAP1L5Q96NT1 182 aaPredicted RBP6.32□□□□□ -1.4
PCF11-205ENST00000530906 GSDMAQ96QA5 445 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms