RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 ZNF579Q8NAF0 562 aaKnown RBP13.62□□□□□ -0.23
SCN3B-206ENST00000530277 GOLPH3Q9H4A6 298 aa13.62□□□□□ -0.23
SCN3B-206ENST00000530277 HDAC9Q9UKV0 1011 aa13.62□□□□□ -0.23
SCN3B-206ENST00000530277 PCDHA6Q9UN73 950 aa13.62□□□□□ -0.23
SCN3B-206ENST00000530277 USTQ9Y2C2 406 aa13.62□□□□□ -0.23
SCN3B-206ENST00000530277 PCDHA8Q9Y5H6 950 aa13.62□□□□□ -0.23
SCN3B-206ENST00000530277 PEAK1Q9H792 1746 aa13.62□□□□□ -0.23
SCN3B-206ENST00000530277 SEMA3EO15041 775 aa13.62□□□□□ -0.23
SCN3B-206ENST00000530277 GH2P01242 217 aa13.62□□□□□ -0.23
SCN3B-206ENST00000530277 EEF1GP26641 437 aaKnown RBP13.62□□□□□ -0.23
SCN3B-206ENST00000530277 VSNL1P62760 191 aa13.62□□□□□ -0.23
SCN3B-206ENST00000530277 TNNC1P63316 161 aa13.62□□□□□ -0.23
SCN3B-206ENST00000530277 CFAP221Q4G0U5 840 aa13.62□□□□□ -0.23
SCN3B-206ENST00000530277 GRIPAP1Q4V328 841 aa13.62□□□□□ -0.23
SCN3B-206ENST00000530277 NFRKBQ6P4R8 1299 aa13.62□□□□□ -0.23
SCN3B-206ENST00000530277 NOA1Q8NC60 698 aaKnown RBP13.62□□□□□ -0.23
SCN3B-206ENST00000530277 TRIM58Q8NG06 486 aa13.62□□□□□ -0.23
SCN3B-206ENST00000530277 RIOK1Q9BRS2 568 aaKnown RBP13.62□□□□□ -0.23
SCN3B-206ENST00000530277 AP1M1Q9BXS5 423 aa13.62□□□□□ -0.23
SCN3B-206ENST00000530277 EHD2Q9NZN4 543 aa13.62□□□□□ -0.23
SCN3B-206ENST00000530277 GOLGA6L10A0A0M3HER8 536 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 LRRC53A6NM62 1247 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 OPA1O60313 960 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 PLEKP08567 350 aaPredicted RBP13.61□□□□□ -0.23
SCN3B-206ENST00000530277 FGFR2P21802 821 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 FAM178BQ8IXR5 827 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 TSGA10Q9BZW7 698 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 EHMT1Q9H9B1 1298 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 EPB41L5Q9HCM4 733 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 WDR19Q8NEZ3 1342 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 FOXP2O15409 715 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 ADCY1Q08828 1119 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 DPYDQ12882 1025 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 DLGAP5Q15398 846 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 GRIK5Q16478 980 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 IFI16Q16666 785 aaKnown RBP13.61□□□□□ -0.23
SCN3B-206ENST00000530277 HPSEQ9Y251 543 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 ATP6V0A2Q9Y487 856 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 CNTNAP5Q8WYK1 1306 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 GFPT2O94808 682 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 PLA2G4BP0C869 781 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 DLATP10515 647 aaKnown RBP13.61□□□□□ -0.23
SCN3B-206ENST00000530277 FKBP3Q00688 224 aaKnown RBP13.61□□□□□ -0.23
SCN3B-206ENST00000530277 ODR4Q5SWX8 454 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 CEP85LQ5SZL2 805 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 ANKRD7Q92527 254 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 DHTKD1Q96HY7 919 aaPredicted RBP13.61□□□□□ -0.23
SCN3B-206ENST00000530277 CCDC114Q96M63 670 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 EMILIN3Q9NT22 766 aa13.61□□□□□ -0.23
SCN3B-206ENST00000530277 OVOS2A0A0G2JMS6 1433 aa13.6□□□□□ -0.23
SCN3B-206ENST00000530277 LGALS16A8MUM7 142 aa13.6□□□□□ -0.23
SCN3B-206ENST00000530277 PCP11498 1178 aaKnown RBP13.6□□□□□ -0.23
SCN3B-206ENST00000530277 NR1I3Q14994 352 aa13.6□□□□□ -0.23
SCN3B-206ENST00000530277 CAPN12Q6ZSI9 719 aa13.6□□□□□ -0.23
SCN3B-206ENST00000530277 REXO1L1PQ8IX06 675 aa13.6□□□□□ -0.23
SCN3B-206ENST00000530277 BARHL2Q9NY43 387 aa13.6□□□□□ -0.23
SCN3B-206ENST00000530277 ADAM21Q9UKJ8 722 aa13.6□□□□□ -0.23
SCN3B-206ENST00000530277 RNF40O75150 1001 aa13.6□□□□□ -0.23
SCN3B-206ENST00000530277 ZBED6P86452 979 aa13.6□□□□□ -0.23
SCN3B-206ENST00000530277 CDC37Q16543 378 aaPredicted RBP13.6□□□□□ -0.23
SCN3B-206ENST00000530277 EXOC3L4Q17RC7 722 aa13.6□□□□□ -0.23
SCN3B-206ENST00000530277 CPLX4Q7Z7G2 160 aa13.6□□□□□ -0.23
SCN3B-206ENST00000530277 SALL1Q9NSC2 1324 aa13.6□□□□□ -0.23
SCN3B-206ENST00000530277 CCDC151A5D8V7 595 aa13.6□□□□□ -0.23
SCN3B-206ENST00000530277 GTF2A1P52655 376 aaPredicted RBP13.6□□□□□ -0.23
SCN3B-206ENST00000530277 GNGT1P63211 74 aa13.6□□□□□ -0.23
SCN3B-206ENST00000530277 PKN1Q16512 942 aa13.6□□□□□ -0.23
SCN3B-206ENST00000530277 GSTA5Q7RTV2 222 aa13.6□□□□□ -0.23
SCN3B-206ENST00000530277 PPM1KQ8N3J5 372 aa13.6□□□□□ -0.23
SCN3B-206ENST00000530277 NT5C3AQ9H0P0 336 aa13.6□□□□□ -0.23
SCN3B-206ENST00000530277 ARHGEF10LQ9HCE6 1279 aa13.6□□□□□ -0.23
SCN3B-206ENST00000530277 KCNK9Q9NPC2 374 aa13.6□□□□□ -0.23
SCN3B-206ENST00000530277 A0A1B0GTH6 734 aa13.59□□□□□ -0.23
SCN3B-206ENST00000530277 CCT5P48643 541 aa13.59□□□□□ -0.23
SCN3B-206ENST00000530277 PPP1R7Q15435 360 aa13.59□□□□□ -0.23
SCN3B-206ENST00000530277 MAN2A1Q16706 1144 aa13.59□□□□□ -0.23
SCN3B-206ENST00000530277 OTUD6BQ8N6M0 293 aa13.59□□□□□ -0.23
SCN3B-206ENST00000530277 MGARPQ8TDB4 240 aa13.59□□□□□ -0.23
SCN3B-206ENST00000530277 BCAS4Q8TDM0 211 aa13.59□□□□□ -0.23
SCN3B-206ENST00000530277 CTIFO43310 598 aaKnown RBP13.59□□□□□ -0.23
SCN3B-206ENST00000530277 N4BP1O75113 896 aaKnown RBP13.59□□□□□ -0.23
SCN3B-206ENST00000530277 ARL6IP4Q66PJ3 421 aaKnown RBP13.59□□□□□ -0.23
SCN3B-206ENST00000530277 AMNQ9BXJ7 453 aa13.59□□□□□ -0.23
SCN3B-206ENST00000530277 TRIM9Q9C026 710 aa13.59□□□□□ -0.23
SCN3B-206ENST00000530277 PCDHA13Q9Y5I0 950 aa13.59□□□□□ -0.23
SCN3B-206ENST00000530277 GOLGA8IPA6NC78 632 aa13.59□□□□□ -0.23
SCN3B-206ENST00000530277 GOLGA8JA6NMD2 632 aa13.59□□□□□ -0.23
SCN3B-206ENST00000530277 KRIT1O00522 736 aa13.59□□□□□ -0.23
SCN3B-206ENST00000530277 LIG3P49916 1009 aa13.59□□□□□ -0.23
SCN3B-206ENST00000530277 KRT71Q3SY84 523 aa13.59□□□□□ -0.23
SCN3B-206ENST00000530277 JDP2Q8WYK2 163 aa13.59□□□□□ -0.23
SCN3B-206ENST00000530277 MRFAP1Q9Y605 127 aa13.59□□□□□ -0.23
SCN3B-206ENST00000530277 PPP1R3GB7ZBB8 358 aa13.58□□□□□ -0.23
SCN3B-206ENST00000530277 HEXIM1O94992 359 aaKnown RBP13.58□□□□□ -0.23
SCN3B-206ENST00000530277 IVLP07476 585 aa13.58□□□□□ -0.23
SCN3B-206ENST00000530277 RASA1P20936 1047 aa13.58□□□□□ -0.23
SCN3B-206ENST00000530277 STAT1P42224 750 aa13.58□□□□□ -0.23
SCN3B-206ENST00000530277 PMS1P54277 932 aaKnown RBP13.58□□□□□ -0.23
SCN3B-206ENST00000530277 SEC23AQ15436 765 aa13.58□□□□□ -0.23
SCN3B-206ENST00000530277 VWA3BQ502W6 1294 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms