RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 USP17L12C9JPN9 530 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 USP17L21D6R901 530 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 DNAJC8O75937 253 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-223ENST00000529986 ECE1P42892 770 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 FOXD4Q12950 439 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-223ENST00000529986 PPP2R5BQ15173 497 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 TPTE2Q6XPS3 522 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 ARMC9Q7Z3E5 817 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 ZSCAN10Q96SZ4 725 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-223ENST00000529986 OSBPL1AQ9BXW6 950 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 ANKRD2Q9GZV1 360 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 ZMYND12Q9H0C1 365 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 BAG5Q9UL15 447 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 TNKSO95271 1327 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 SYNJ2BP-COX16A0A087WUM0 186 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 A0A0G2JND7 137 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 HMGB1P1B2RPK0 211 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-223ENST00000529986 DYNLT1P63172 113 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 CYP4A11Q02928 519 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 RNASELQ05823 741 aaKnown RBP8.28□□□□□ -1.08
CTNND1-223ENST00000529986 TCP10Q12799 353 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 HADHQ16836 314 aaKnown RBP8.28□□□□□ -1.08
CTNND1-223ENST00000529986 HP1BP3Q5SSJ5 553 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-223ENST00000529986 FBXW10Q5XX13 1052 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 RAPH1Q70E73 1250 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 IFNL3Q8IZI9 196 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 FMO2Q99518 471 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 COX16Q9P0S2 106 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 ZNF711Q9Y462 761 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 K7ENM7 598 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 GNGT2O14610 69 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 ECEL1O95672 775 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 TMOD1P28289 359 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 PDCD2Q16342 344 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-223ENST00000529986 ZNF589Q86UQ0 364 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-223ENST00000529986 LINC00301Q8NCQ3 95 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 BBOF1Q8ND07 529 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 SSH3Q8TE77 659 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 GSDMAQ96QA5 445 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 KRT82Q9NSB4 513 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 SUFUQ9UMX1 484 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 MORC2Q9Y6X9 1032 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-223ENST00000529986 EFCAB6Q5THR3 1501 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 PLEKHG3A1L390 1219 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 CUL4AQ13619 759 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 SLC12A1Q13621 1099 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 LMTK3Q96Q04 1460 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 ENO4A6NNW6 628 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 CA4P22748 312 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 ERFP50548 548 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 RFX8Q6ZV50 586 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 TRIM50Q86XT4 487 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 NUDCD3Q8IVD9 361 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 PARP9Q8IXQ6 854 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 NME8Q8N427 588 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 PIK3R5Q8WYR1 880 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 LBHD1Q9BQE6 289 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-223ENST00000529986 SPZ1Q9BXG8 430 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 TLR7Q9NYK1 1049 aaKnown RBP8.28□□□□□ -1.08
CTNND1-223ENST00000529986 EPS15L1Q9UBC2 864 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 ARPP21Q9UBL0 812 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-223ENST00000529986 ARAP3Q8WWN8 1544 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 EXOC1LA0A1B0GW35 172 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 ESYT3A0FGR9 886 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 GAS7O60861 476 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 GFPT2O94808 682 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 UFL1O94874 794 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 SCG2P13521 617 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 KRT10P13645 584 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 GRAMD4Q6IC98 578 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 CAPRIN2Q6IMN6 1127 aaKnown RBP8.28□□□□□ -1.08
CTNND1-223ENST00000529986 NSMFQ6X4W1 530 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 LPIN2Q92539 896 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 MAP4K1Q92918 833 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 PITPNM3Q9BZ71 974 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 CLEC11AQ9Y240 323 aa8.28□□□□□ -1.08
CTNND1-223ENST00000529986 KDM3AQ9Y4C1 1321 aa8.27□□□□□ -1.08
CTNND1-223ENST00000529986 MYO1FO00160 1098 aa8.27□□□□□ -1.08
CTNND1-223ENST00000529986 PPP1R12AO14974 1030 aaPredicted RBP8.27□□□□□ -1.08
CTNND1-223ENST00000529986 PPP6R2O75170 966 aa8.27□□□□□ -1.08
CTNND1-223ENST00000529986 MT-ND3P03897 115 aa8.27□□□□□ -1.08
CTNND1-223ENST00000529986 NR5A1Q13285 461 aa8.27□□□□□ -1.08
CTNND1-223ENST00000529986 RFX6Q8HWS3 928 aa8.27□□□□□ -1.08
CTNND1-223ENST00000529986 P2RX5Q93086 422 aa8.27□□□□□ -1.08
CTNND1-223ENST00000529986 ZNF653Q96CK0 615 aa8.27□□□□□ -1.08
CTNND1-223ENST00000529986 SMYD3Q9H7B4 428 aa8.27□□□□□ -1.08
CTNND1-223ENST00000529986 C1orf112Q9NSG2 853 aa8.27□□□□□ -1.08
CTNND1-223ENST00000529986 UGGT1Q9NYU2 1555 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 MAPK13O15264 365 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 CYP21A2P08686 494 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 NSFP46459 744 aaKnown RBP8.27□□□□□ -1.09
CTNND1-223ENST00000529986 DR1Q01658 176 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 ITKQ08881 620 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 NEK8Q86SG6 692 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 FAM178BQ8IXR5 827 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 NYXQ9GZU5 481 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 POLR3EQ9NVU0 708 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 RCOR1Q9UKL0 485 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 PLS3P13797 630 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 NR2F2P24468 414 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms