RNA–Protein interactions for RNA: ENST00000528614.1

AP002008.3-201, humanhuman

TSL 1 (best) BASIC

Gene AP002008.3, Length 2,587 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.3-201ENST00000528614 HAS1Q92839 578 aa11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 MMRN2Q9H8L6 949 aa11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 SWAP70Q9UH65 585 aa11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 DDX25Q9UHL0 483 aaKnown RBP11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 SUGT1Q9Y2Z0 365 aa11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 KLRG2A4D1S0 409 aaPredicted RBP11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 USP17L10C9JJH3 530 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 MPHOSPH10O00566 681 aaKnown RBP11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 ZNF263O14978 683 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 EPHB6O15197 1021 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 MARCH6O60337 910 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 TUBBP07437 444 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 SLURP2P0DP57 97 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 MRPL12P52815 198 aaKnown RBP11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 GYS2P54840 703 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 PSMD2Q13200 908 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 MAN2A1Q16706 1144 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 CCDC96Q2M329 555 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 PPP1R18Q6NYC8 613 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 SAMD1Q6SPF0 538 aaPredicted RBP11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 KCTD1Q719H9 257 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 KRT26Q7Z3Y9 468 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 CUL5Q93034 780 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 ZBTB9Q96C00 473 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 IQCDQ96DY2 449 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 CAPZA3Q96KX2 299 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 LRRC27Q9C0I9 530 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 GBP3Q9H0R5 595 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 PDE11AQ9HCR9 933 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 FAM207AQ9NSI2 230 aaPredicted RBP11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 MACROD2A1Z1Q3 448 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 HNRNPH3P31942 346 aaKnown RBP11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 VAV2P52735 878 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 LRRC63Q05C16 580 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 KIF5AQ12840 1032 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 SPA17Q15506 151 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 DOK7Q18PE1 504 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 SEPT12Q8IYM1 358 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 PURBQ96QR8 312 aaKnown RBP11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 ZC3H12CQ9C0D7 883 aaKnown RBP11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 ARHGAP20Q9P2F6 1191 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 PLAGL2Q9UPG8 496 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 ATP6V0A2Q9Y487 856 aa11.68□□□□□ -0.54
AP002008.3-201ENST00000528614 ERCC3P19447 782 aa11.67□□□□□ -0.54
AP002008.3-201ENST00000528614 USP14P54578 494 aa11.67□□□□□ -0.54
AP002008.3-201ENST00000528614 EHHADHQ08426 723 aa11.67□□□□□ -0.54
AP002008.3-201ENST00000528614 CDC42EP5Q6NZY7 148 aa11.67□□□□□ -0.54
AP002008.3-201ENST00000528614 WDR93Q6P2C0 686 aa11.67□□□□□ -0.54
AP002008.3-201ENST00000528614 C2CD5Q86YS7 1000 aa11.67□□□□□ -0.54
AP002008.3-201ENST00000528614 UIMC1Q96RL1 719 aa11.67□□□□□ -0.54
AP002008.3-201ENST00000528614 PSTPIP2Q9H939 334 aa11.67□□□□□ -0.54
AP002008.3-201ENST00000528614 RNF216Q9NWF9 866 aaPredicted RBP11.67□□□□□ -0.54
AP002008.3-201ENST00000528614 PCDHA12Q9UN75 941 aa11.67□□□□□ -0.54
AP002008.3-201ENST00000528614 CCDC66A2RUB6 948 aa11.67□□□□□ -0.54
AP002008.3-201ENST00000528614 ZBTB5O15062 677 aa11.67□□□□□ -0.54
AP002008.3-201ENST00000528614 EIF4A3P38919 411 aaKnown RBP11.67□□□□□ -0.54
AP002008.3-201ENST00000528614 GPS2Q13227 327 aa11.67□□□□□ -0.54
AP002008.3-201ENST00000528614 CASP8Q14790 479 aa11.67□□□□□ -0.54
AP002008.3-201ENST00000528614 GPATCH4Q5T3I0 446 aaKnown RBP11.67□□□□□ -0.54
AP002008.3-201ENST00000528614 LRRC55Q6ZSA7 311 aa11.67□□□□□ -0.54
AP002008.3-201ENST00000528614 TMC4Q7Z404 712 aa11.67□□□□□ -0.54
AP002008.3-201ENST00000528614 DNAJC19Q96DA6 116 aa11.67□□□□□ -0.54
AP002008.3-201ENST00000528614 TSG101Q99816 390 aa11.67□□□□□ -0.54
AP002008.3-201ENST00000528614 ZNF185O15231 689 aa11.66□□□□□ -0.54
AP002008.3-201ENST00000528614 TAF3Q5VWG9 929 aa11.66□□□□□ -0.54
AP002008.3-201ENST00000528614 RRAGAQ7L523 313 aa11.66□□□□□ -0.54
AP002008.3-201ENST00000528614 CCDC84Q86UT8 332 aaPredicted RBP11.66□□□□□ -0.54
AP002008.3-201ENST00000528614 MYOCDQ8IZQ8 938 aa11.66□□□□□ -0.54
AP002008.3-201ENST00000528614 SMCR8Q8TEV9 937 aaPredicted RBP11.66□□□□□ -0.54
AP002008.3-201ENST00000528614 MTMR8Q96EF0 704 aa11.66□□□□□ -0.54
AP002008.3-201ENST00000528614 TSGA10Q9BZW7 698 aa11.66□□□□□ -0.54
AP002008.3-201ENST00000528614 PANK4Q9NVE7 773 aa11.66□□□□□ -0.54
AP002008.3-201ENST00000528614 PCDHA13Q9Y5I0 950 aa11.66□□□□□ -0.54
AP002008.3-201ENST00000528614 ABCB11O95342 1321 aa11.66□□□□□ -0.54
AP002008.3-201ENST00000528614 ONECUT3O60422 494 aaPredicted RBP11.66□□□□□ -0.54
AP002008.3-201ENST00000528614 USO1O60763 962 aaKnown RBP11.66□□□□□ -0.54
AP002008.3-201ENST00000528614 SSBP05455 408 aaKnown RBP eCLIP11.66□□□□□ -0.54
AP002008.3-201ENST00000528614 CKAP4Q07065 602 aaKnown RBP11.66□□□□□ -0.54
AP002008.3-201ENST00000528614 COASYQ13057 564 aa11.66□□□□□ -0.54
AP002008.3-201ENST00000528614 GPIHBP1Q8IV16 184 aa11.66□□□□□ -0.54
AP002008.3-201ENST00000528614 ZFPM1Q8IX07 1006 aa11.66□□□□□ -0.54
AP002008.3-201ENST00000528614 MSL3Q8N5Y2 521 aaKnown RBP11.66□□□□□ -0.54
AP002008.3-201ENST00000528614 JADE2Q9NQC1 790 aa11.66□□□□□ -0.54
AP002008.3-201ENST00000528614 ADAM21Q9UKJ8 722 aa11.66□□□□□ -0.54
AP002008.3-201ENST00000528614 ATF5Q9Y2D1 282 aaPredicted RBP11.66□□□□□ -0.54
AP002008.3-201ENST00000528614 MYO3BQ8WXR4 1341 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 ANO9A1A5B4 782 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 LRRC53A6NM62 1247 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 USP17L15C9J2P7 530 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 USP17L13C9JLJ4 530 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 USP17L11C9JVI0 530 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 USP17L18D6R9N7 530 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 USP17L22D6RA61 530 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 USP17L17D6RBQ6 530 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 USP17L19D6RCP7 530 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 USP17L20D6RJB6 530 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 PDE2AO00408 941 aaPredicted RBP11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 RAD21O60216 631 aa11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 N4BP1O75113 896 aaKnown RBP11.65□□□□□ -0.54
AP002008.3-201ENST00000528614 HLA-DOAP06340 250 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms