RNA–Protein interactions for RNA: ENST00000528608.5

COMMD9-205, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 988 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-205ENST00000528608 MKNK2Q9HBH9 465 aa10.39□□□□□ -0.75
COMMD9-205ENST00000528608 CYP8B1Q9UNU6 501 aa10.39□□□□□ -0.75
COMMD9-205ENST00000528608 ATP6V0A2Q9Y487 856 aa10.39□□□□□ -0.75
COMMD9-205ENST00000528608 U3KQE9 123 aa10.39□□□□□ -0.75
COMMD9-205ENST00000528608 MYH3P11055 1940 aa10.39□□□□□ -0.75
COMMD9-205ENST00000528608 GRM8O00222 908 aa10.38□□□□□ -0.75
COMMD9-205ENST00000528608 BBOX1O75936 387 aa10.38□□□□□ -0.75
COMMD9-205ENST00000528608 CSF1RP07333 972 aa10.38□□□□□ -0.75
COMMD9-205ENST00000528608 RASIP1Q5U651 963 aa10.38□□□□□ -0.75
COMMD9-205ENST00000528608 WFDC3Q8IUB2 231 aa10.38□□□□□ -0.75
COMMD9-205ENST00000528608 SP8Q8IXZ3 490 aa10.38□□□□□ -0.75
COMMD9-205ENST00000528608 ARHGAP45Q92619 1136 aa10.38□□□□□ -0.75
COMMD9-205ENST00000528608 FRAT1Q92837 279 aaPredicted RBP10.38□□□□□ -0.75
COMMD9-205ENST00000528608 SUCLG2Q96I99 432 aa10.38□□□□□ -0.75
COMMD9-205ENST00000528608 FRMD6Q96NE9 622 aa10.38□□□□□ -0.75
COMMD9-205ENST00000528608 USP44Q9H0E7 712 aa10.38□□□□□ -0.75
COMMD9-205ENST00000528608 C9orf78Q9NZ63 289 aaPredicted RBP10.38□□□□□ -0.75
COMMD9-205ENST00000528608 RNF181Q9P0P0 153 aa10.38□□□□□ -0.75
COMMD9-205ENST00000528608 UTYO14607 1347 aa10.37□□□□□ -0.75
COMMD9-205ENST00000528608 TRIM27P14373 513 aa10.37□□□□□ -0.75
COMMD9-205ENST00000528608 ITIH2P19823 946 aa10.37□□□□□ -0.75
COMMD9-205ENST00000528608 OXCT1P55809 520 aa10.37□□□□□ -0.75
COMMD9-205ENST00000528608 RPS8P62241 208 aaKnown RBP10.37□□□□□ -0.75
COMMD9-205ENST00000528608 CCDC152Q4G0S7 254 aa10.37□□□□□ -0.75
COMMD9-205ENST00000528608 SOGA3Q5TF21 947 aa10.37□□□□□ -0.75
COMMD9-205ENST00000528608 SCARA3Q6AZY7 606 aa10.37□□□□□ -0.75
COMMD9-205ENST00000528608 CDC37L1Q7L3B6 337 aa10.37□□□□□ -0.75
COMMD9-205ENST00000528608 KRTAP19-1Q8IUB9 90 aa10.37□□□□□ -0.75
COMMD9-205ENST00000528608 ASIC4Q96FT7 647 aa10.37□□□□□ -0.75
COMMD9-205ENST00000528608 HRASLS5Q96KN8 279 aa10.37□□□□□ -0.75
COMMD9-205ENST00000528608 API5Q9BZZ5 524 aaKnown RBP10.37□□□□□ -0.75
COMMD9-205ENST00000528608 TAOK3Q9H2K8 898 aa10.37□□□□□ -0.75
COMMD9-205ENST00000528608 ZNF277Q9NRM2 450 aaPredicted RBP10.37□□□□□ -0.75
COMMD9-205ENST00000528608 VAV3Q9UKW4 847 aa10.37□□□□□ -0.75
COMMD9-205ENST00000528608 LTBP3Q9NS15 1303 aa10.36□□□□□ -0.75
COMMD9-205ENST00000528608 FANCGO15287 622 aa10.36□□□□□ -0.75
COMMD9-205ENST00000528608 HSP90B1P14625 803 aaKnown RBP10.36□□□□□ -0.75
COMMD9-205ENST00000528608 JUNBP17275 347 aaPredicted RBP10.36□□□□□ -0.75
COMMD9-205ENST00000528608 LMNB1P20700 586 aa10.36□□□□□ -0.75
COMMD9-205ENST00000528608 NTF4P34130 210 aa10.36□□□□□ -0.75
COMMD9-205ENST00000528608 PRKCQQ04759 706 aa10.36□□□□□ -0.75
COMMD9-205ENST00000528608 ZBTB37Q5TC79 503 aa10.36□□□□□ -0.75
COMMD9-205ENST00000528608 ATF7IPQ6VMQ6 1270 aa10.36□□□□□ -0.75
COMMD9-205ENST00000528608 RTKN2Q8IZC4 609 aa10.36□□□□□ -0.75
COMMD9-205ENST00000528608 PRDM10Q9NQV6 1147 aa10.36□□□□□ -0.75
COMMD9-205ENST00000528608 GTF2IRD1Q9UHL9 959 aa10.36□□□□□ -0.75
COMMD9-205ENST00000528608 KIF16BQ96L93 1317 aa10.35□□□□□ -0.75
COMMD9-205ENST00000528608 DICER1Q9UPY3 1922 aaKnown RBP10.35□□□□□ -0.75
COMMD9-205ENST00000528608 COL4A5P29400 1685 aa10.35□□□□□ -0.75
COMMD9-205ENST00000528608 TMEM265A0A087WTH1 108 aa10.35□□□□□ -0.75
COMMD9-205ENST00000528608 WTIPA6NIX2 430 aaPredicted RBP10.35□□□□□ -0.75
COMMD9-205ENST00000528608 CD8BP10966 210 aa10.35□□□□□ -0.75
COMMD9-205ENST00000528608 ITGB5P18084 799 aa10.35□□□□□ -0.75
COMMD9-205ENST00000528608 EIF4BP23588 611 aaKnown RBP10.35□□□□□ -0.75
COMMD9-205ENST00000528608 CCT4P50991 539 aaKnown RBP10.35□□□□□ -0.75
COMMD9-205ENST00000528608 GPSM2P81274 684 aa10.35□□□□□ -0.75
COMMD9-205ENST00000528608 RING1Q06587 406 aa10.35□□□□□ -0.75
COMMD9-205ENST00000528608 AOC3Q16853 763 aa10.35□□□□□ -0.75
COMMD9-205ENST00000528608 ZNF792Q3KQV3 632 aa10.35□□□□□ -0.75
COMMD9-205ENST00000528608 INTS3Q68E01 1043 aaKnown RBP10.35□□□□□ -0.75
COMMD9-205ENST00000528608 LMBR1LQ6UX01 489 aa10.35□□□□□ -0.75
COMMD9-205ENST00000528608 SV2BQ7L1I2 683 aa10.35□□□□□ -0.75
COMMD9-205ENST00000528608 UBE3DQ7Z6J8 389 aa10.35□□□□□ -0.75
COMMD9-205ENST00000528608 ANKRD44Q8N8A2 993 aa10.35□□□□□ -0.75
COMMD9-205ENST00000528608 KCT2Q8NC54 265 aa10.35□□□□□ -0.75
COMMD9-205ENST00000528608 PSMD1Q99460 953 aa10.35□□□□□ -0.75
COMMD9-205ENST00000528608 RTL9Q8NET4 1388 aa10.35□□□□□ -0.75
COMMD9-205ENST00000528608 LRRC37AA6NMS7 1700 aa10.35□□□□□ -0.75
COMMD9-205ENST00000528608 IPO8O15397 1037 aaKnown RBP10.34□□□□□ -0.75
COMMD9-205ENST00000528608 RLBP1P12271 317 aa10.34□□□□□ -0.75
COMMD9-205ENST00000528608 GNA15P30679 374 aa10.34□□□□□ -0.75
COMMD9-205ENST00000528608 IARSP41252 1262 aaKnown RBP10.34□□□□□ -0.75
COMMD9-205ENST00000528608 ZKSCAN2Q63HK3 967 aa10.34□□□□□ -0.75
COMMD9-205ENST00000528608 ANKRD18AQ8IVF6 992 aa10.34□□□□□ -0.75
COMMD9-205ENST00000528608 ZNF526Q8TF50 670 aaPredicted RBP10.34□□□□□ -0.75
COMMD9-205ENST00000528608 MEIS3Q99687 375 aa10.34□□□□□ -0.75
COMMD9-205ENST00000528608 RTFDC1Q9BY42 306 aaPredicted RBP10.34□□□□□ -0.75
COMMD9-205ENST00000528608 BICC1Q9H694 974 aaKnown RBP10.34□□□□□ -0.75
COMMD9-205ENST00000528608 SPEF2Q9C093 1822 aa10.34□□□□□ -0.75
COMMD9-205ENST00000528608 DUOX1Q9NRD9 1551 aa10.34□□□□□ -0.75
COMMD9-205ENST00000528608 PRAMEF27A3QJZ7 478 aa10.33□□□□□ -0.76
COMMD9-205ENST00000528608 PRPF40AO75400 957 aaKnown RBP10.33□□□□□ -0.76
COMMD9-205ENST00000528608 FUT4P22083 530 aa10.33□□□□□ -0.76
COMMD9-205ENST00000528608 CD96P40200 585 aa10.33□□□□□ -0.76
COMMD9-205ENST00000528608 RABL6Q3YEC7 729 aaPredicted RBP10.33□□□□□ -0.76
COMMD9-205ENST00000528608 DPP8Q6V1X1 898 aaPredicted RBP10.33□□□□□ -0.76
COMMD9-205ENST00000528608 TMC4Q7Z404 712 aa10.33□□□□□ -0.76
COMMD9-205ENST00000528608 TMEM57Q8N5G2 664 aa10.33□□□□□ -0.76
COMMD9-205ENST00000528608 GPR101Q96P66 508 aaPredicted RBP10.33□□□□□ -0.76
COMMD9-205ENST00000528608 CDC5LQ99459 802 aaKnown RBP10.33□□□□□ -0.76
COMMD9-205ENST00000528608 POLLQ9UGP5 575 aa10.33□□□□□ -0.76
COMMD9-205ENST00000528608 RCAN3Q9UKA8 241 aa10.33□□□□□ -0.76
COMMD9-205ENST00000528608 MINPP1Q9UNW1 487 aa10.33□□□□□ -0.76
COMMD9-205ENST00000528608 PLAGL2Q9UPG8 496 aa10.33□□□□□ -0.76
COMMD9-205ENST00000528608 LTBP1Q14766 1721 aa10.33□□□□□ -0.76
COMMD9-205ENST00000528608 TIAM2Q8IVF5 1701 aa10.33□□□□□ -0.76
COMMD9-205ENST00000528608 ANKRD18BA2A2Z9 1011 aa10.32□□□□□ -0.76
COMMD9-205ENST00000528608 PLIN1O60240 522 aa10.32□□□□□ -0.76
COMMD9-205ENST00000528608 TTBK2Q6IQ55 1244 aa10.32□□□□□ -0.76
COMMD9-205ENST00000528608 ZNF507Q8TCN5 953 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms