RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 POTEMA6NI47 508 aa16.51■□□□□ 0.23
ECHDC1-220ENST00000528402 PHF20L1A8MW92 1017 aa16.51■□□□□ 0.23
ECHDC1-220ENST00000528402 DYNC1I1O14576 645 aa16.51■□□□□ 0.23
ECHDC1-220ENST00000528402 KIF20AO95235 890 aa16.51■□□□□ 0.23
ECHDC1-220ENST00000528402 FDX1P10109 184 aa16.51■□□□□ 0.23
ECHDC1-220ENST00000528402 COPB1P53618 953 aaKnown RBP16.51■□□□□ 0.23
ECHDC1-220ENST00000528402 MCM6Q14566 821 aa16.51■□□□□ 0.23
ECHDC1-220ENST00000528402 KRT31Q15323 416 aa16.51■□□□□ 0.23
ECHDC1-220ENST00000528402 DCAF15Q66K64 600 aa16.51■□□□□ 0.23
ECHDC1-220ENST00000528402 NYAP1Q6ZVC0 841 aa16.51■□□□□ 0.23
ECHDC1-220ENST00000528402 MIGA2Q7L4E1 593 aa16.51■□□□□ 0.23
ECHDC1-220ENST00000528402 CNGA4Q8IV77 575 aa16.51■□□□□ 0.23
ECHDC1-220ENST00000528402 SPICE1Q8N0Z3 855 aa16.51■□□□□ 0.23
ECHDC1-220ENST00000528402 GUF1Q8N442 669 aaKnown RBP16.51■□□□□ 0.23
ECHDC1-220ENST00000528402 BAG1Q99933 345 aaPredicted RBP16.51■□□□□ 0.23
ECHDC1-220ENST00000528402 MYMKA6NI61 221 aa16.5■□□□□ 0.23
ECHDC1-220ENST00000528402 WDR46O15213 610 aaKnown RBP16.5■□□□□ 0.23
ECHDC1-220ENST00000528402 GTF2F1P35269 517 aaKnown RBP eCLIP16.5■□□□□ 0.23
ECHDC1-220ENST00000528402 ZNF76P36508 570 aa16.5■□□□□ 0.23
ECHDC1-220ENST00000528402 HSP90AA4PQ58FG1 418 aa16.5■□□□□ 0.23
ECHDC1-220ENST00000528402 TTI2Q6NXR4 508 aa16.5■□□□□ 0.23
ECHDC1-220ENST00000528402 ETNPPLQ8TBG4 499 aa16.5■□□□□ 0.23
ECHDC1-220ENST00000528402 LRRC15Q8TF66 581 aa16.5■□□□□ 0.23
ECHDC1-220ENST00000528402 IQCDQ96DY2 449 aa16.5■□□□□ 0.23
ECHDC1-220ENST00000528402 TRIM47Q96LD4 638 aa16.5■□□□□ 0.23
ECHDC1-220ENST00000528402 SGIP1Q9BQI5 828 aa16.5■□□□□ 0.23
ECHDC1-220ENST00000528402 KIAA1683Q9H0B3 1180 aa16.5■□□□□ 0.23
ECHDC1-220ENST00000528402 BCS1LQ9Y276 419 aa16.5■□□□□ 0.23
ECHDC1-220ENST00000528402 A0A1W2PQC6 194 aa16.49■□□□□ 0.23
ECHDC1-220ENST00000528402 MUTP22033 750 aa16.49■□□□□ 0.23
ECHDC1-220ENST00000528402 PTGER2P43116 358 aa16.49■□□□□ 0.23
ECHDC1-220ENST00000528402 USP14P54578 494 aa16.49■□□□□ 0.23
ECHDC1-220ENST00000528402 PRR16Q569H4 304 aa16.49■□□□□ 0.23
ECHDC1-220ENST00000528402 CEP135Q66GS9 1140 aa16.49■□□□□ 0.23
ECHDC1-220ENST00000528402 CENPPQ6IPU0 288 aa16.49■□□□□ 0.23
ECHDC1-220ENST00000528402 CCDC65Q8IXS2 484 aa16.49■□□□□ 0.23
ECHDC1-220ENST00000528402 TC2NQ8N9U0 490 aa16.49■□□□□ 0.23
ECHDC1-220ENST00000528402 PRPF38AQ8NAV1 312 aaKnown RBP16.49■□□□□ 0.23
ECHDC1-220ENST00000528402 TEPSINQ96N21 525 aa16.49■□□□□ 0.23
ECHDC1-220ENST00000528402 FEZ1Q99689 392 aa16.49■□□□□ 0.23
ECHDC1-220ENST00000528402 CNOT7Q9UIV1 285 aaKnown RBP16.49■□□□□ 0.23
ECHDC1-220ENST00000528402 ATAD5Q96QE3 1844 aa16.49■□□□□ 0.23
ECHDC1-220ENST00000528402 PITPNM2Q9BZ72 1349 aa16.49■□□□□ 0.23
ECHDC1-220ENST00000528402 UQCRHLA0A096LP55 91 aa16.48■□□□□ 0.23
ECHDC1-220ENST00000528402 OPLAHO14841 1288 aa16.48■□□□□ 0.23
ECHDC1-220ENST00000528402 UQCRHP07919 91 aa16.48■□□□□ 0.23
ECHDC1-220ENST00000528402 RPA1P27694 616 aa16.48■□□□□ 0.23
ECHDC1-220ENST00000528402 DNM2P50570 870 aa16.48■□□□□ 0.23
ECHDC1-220ENST00000528402 LRRC63Q05C16 580 aa16.48■□□□□ 0.23
ECHDC1-220ENST00000528402 EHHADHQ08426 723 aa16.48■□□□□ 0.23
ECHDC1-220ENST00000528402 STK4Q13043 487 aa16.48■□□□□ 0.23
ECHDC1-220ENST00000528402 KIAA1755Q5JYT7 1200 aa16.48■□□□□ 0.23
ECHDC1-220ENST00000528402 E4F1Q66K89 784 aaPredicted RBP16.48■□□□□ 0.23
ECHDC1-220ENST00000528402 MCF2L2Q86YR7 1114 aa16.48■□□□□ 0.23
ECHDC1-220ENST00000528402 MICALL2Q8IY33 904 aa16.48■□□□□ 0.23
ECHDC1-220ENST00000528402 CSGALNACT2Q8N6G5 542 aa16.48■□□□□ 0.23
ECHDC1-220ENST00000528402 DDX12PQ92771 950 aa16.48■□□□□ 0.23
ECHDC1-220ENST00000528402 KIFC2Q96AC6 838 aa16.48■□□□□ 0.23
ECHDC1-220ENST00000528402 C16orf45Q96MC5 204 aaPredicted RBP16.48■□□□□ 0.23
ECHDC1-220ENST00000528402 POLR3CQ9BUI4 534 aaPredicted RBP16.48■□□□□ 0.23
ECHDC1-220ENST00000528402 SRRTQ9BXP5 876 aaKnown RBP16.48■□□□□ 0.23
ECHDC1-220ENST00000528402 TEX33O43247 280 aa16.47■□□□□ 0.23
ECHDC1-220ENST00000528402 ICAM1P05362 532 aa16.47■□□□□ 0.23
ECHDC1-220ENST00000528402 GMPSP49915 693 aaPredicted RBP16.47■□□□□ 0.23
ECHDC1-220ENST00000528402 SNAP25P60880 206 aa16.47■□□□□ 0.23
ECHDC1-220ENST00000528402 RETREG2Q8NC44 543 aa16.47■□□□□ 0.23
ECHDC1-220ENST00000528402 KIF18AQ8NI77 898 aa16.47■□□□□ 0.23
ECHDC1-220ENST00000528402 TSG101Q99816 390 aa16.47■□□□□ 0.23
ECHDC1-220ENST00000528402 NUDT12Q9BQG2 462 aa16.47■□□□□ 0.23
ECHDC1-220ENST00000528402 NUP58Q9BVL2 599 aa16.47■□□□□ 0.23
ECHDC1-220ENST00000528402 PPP1R1BQ9UD71 204 aaPredicted RBP16.47■□□□□ 0.23
ECHDC1-220ENST00000528402 KIAA1024Q9UPX6 916 aa16.47■□□□□ 0.23
ECHDC1-220ENST00000528402 DNM3Q9UQ16 869 aa16.47■□□□□ 0.23
ECHDC1-220ENST00000528402 MAPK8IP1Q9UQF2 711 aa16.47■□□□□ 0.23
ECHDC1-220ENST00000528402 PPP2R3BQ9Y5P8 575 aa16.47■□□□□ 0.23
ECHDC1-220ENST00000528402 LGALS16A8MUM7 142 aa16.46■□□□□ 0.23
ECHDC1-220ENST00000528402 PLA2G4BP0C869 781 aa16.46■□□□□ 0.23
ECHDC1-220ENST00000528402 SETQ01105 290 aaPredicted RBP16.46■□□□□ 0.23
ECHDC1-220ENST00000528402 GHRHRQ02643 423 aa16.46■□□□□ 0.23
ECHDC1-220ENST00000528402 KRT26Q7Z3Y9 468 aa16.46■□□□□ 0.23
ECHDC1-220ENST00000528402 LDHDQ86WU2 507 aa16.46■□□□□ 0.23
ECHDC1-220ENST00000528402 IRF2BP1Q8IU81 584 aa16.46■□□□□ 0.23
ECHDC1-220ENST00000528402 APOBEC3FQ8IUX4 373 aaKnown RBP16.46■□□□□ 0.23
ECHDC1-220ENST00000528402 TMEM139Q8IV31 216 aa16.46■□□□□ 0.23
ECHDC1-220ENST00000528402 LENG9Q96B70 501 aa16.46■□□□□ 0.23
ECHDC1-220ENST00000528402 DUSP9Q99956 384 aaKnown RBP16.46■□□□□ 0.23
ECHDC1-220ENST00000528402 SLF1Q9BQI6 1058 aa16.46■□□□□ 0.23
ECHDC1-220ENST00000528402 ZNF341Q9BYN7 854 aa16.46■□□□□ 0.23
ECHDC1-220ENST00000528402 MAF1Q9H063 256 aa16.46■□□□□ 0.23
ECHDC1-220ENST00000528402 AS3MTQ9HBK9 375 aa16.46■□□□□ 0.23
ECHDC1-220ENST00000528402 MSH4O15457 936 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 CFBP00751 764 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 FECHP22830 423 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 SPIRE1Q08AE8 756 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 KIF4BQ2VIQ3 1234 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 ANKRD40Q6AI12 368 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 CCDC174Q6PII3 467 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 PIAS4Q8N2W9 510 aaPredicted RBP16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 DNAJC19Q96DA6 116 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 PPP1R13BQ96KQ4 1090 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms