RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 NEDD4P46934 1319 aa12.81□□□□□ -0.36
NEDD8-204ENST00000526430 PROB1E7EW31 1015 aa12.8□□□□□ -0.36
NEDD8-204ENST00000526430 EPB41L2O43491 1005 aaKnown RBP12.8□□□□□ -0.36
NEDD8-204ENST00000526430 PURAQ00577 322 aaKnown RBP12.8□□□□□ -0.36
NEDD8-204ENST00000526430 CNTN2Q02246 1040 aa12.8□□□□□ -0.36
NEDD8-204ENST00000526430 SMAD2Q15796 467 aaKnown RBP12.8□□□□□ -0.36
NEDD8-204ENST00000526430 PTPROQ16827 1216 aa12.8□□□□□ -0.36
NEDD8-204ENST00000526430 NFRKBQ6P4R8 1299 aa12.8□□□□□ -0.36
NEDD8-204ENST00000526430 SUGP1Q8IWZ8 645 aaKnown RBP12.8□□□□□ -0.36
NEDD8-204ENST00000526430 FBXO22Q8NEZ5 403 aa12.8□□□□□ -0.36
NEDD8-204ENST00000526430 SLC38A10Q9HBR0 1119 aa12.8□□□□□ -0.36
NEDD8-204ENST00000526430 ZNF292O60281 2723 aa12.8□□□□□ -0.36
NEDD8-204ENST00000526430 DMDP11532 3685 aa12.79□□□□□ -0.36
NEDD8-204ENST00000526430 TMEM221A6NGB7 291 aa12.79□□□□□ -0.36
NEDD8-204ENST00000526430 E7EWF7 191 aa12.79□□□□□ -0.36
NEDD8-204ENST00000526430 M0R296 226 aa12.79□□□□□ -0.36
NEDD8-204ENST00000526430 NMT2O60551 498 aa12.79□□□□□ -0.36
NEDD8-204ENST00000526430 ZBED4O75132 1171 aa12.79□□□□□ -0.36
NEDD8-204ENST00000526430 PARNO95453 639 aaKnown RBP12.79□□□□□ -0.36
NEDD8-204ENST00000526430 DEFB103AP81534 67 aa12.79□□□□□ -0.36
NEDD8-204ENST00000526430 TFAP4Q01664 338 aa12.79□□□□□ -0.36
NEDD8-204ENST00000526430 PTPN11Q06124 597 aaPredicted RBP12.79□□□□□ -0.36
NEDD8-204ENST00000526430 IMMTQ16891 758 aaKnown RBP12.79□□□□□ -0.36
NEDD8-204ENST00000526430 ADCK5Q3MIX3 580 aa12.79□□□□□ -0.36
NEDD8-204ENST00000526430 TAPT1Q6NXT6 567 aa12.79□□□□□ -0.36
NEDD8-204ENST00000526430 CASC1Q6TDU7 716 aa12.79□□□□□ -0.36
NEDD8-204ENST00000526430 TRIM67Q6ZTA4 783 aa12.79□□□□□ -0.36
NEDD8-204ENST00000526430 KIAA1211Q6ZU35 1233 aa12.79□□□□□ -0.36
NEDD8-204ENST00000526430 RNF135Q8IUD6 432 aa12.79□□□□□ -0.36
NEDD8-204ENST00000526430 CPXCR1Q8N123 301 aa12.79□□□□□ -0.36
NEDD8-204ENST00000526430 NEDD1Q8NHV4 660 aa12.79□□□□□ -0.36
NEDD8-204ENST00000526430 PBXIP1Q96AQ6 731 aa12.79□□□□□ -0.36
NEDD8-204ENST00000526430 ZSWIM5Q9P217 1185 aa12.79□□□□□ -0.36
NEDD8-204ENST00000526430 WDR87Q6ZQQ6 2873 aa12.79□□□□□ -0.36
NEDD8-204ENST00000526430 ABHD14A-ACY1A0A1B0GW23 586 aa12.78□□□□□ -0.36
NEDD8-204ENST00000526430 EFCAB14O75071 495 aa12.78□□□□□ -0.36
NEDD8-204ENST00000526430 PTGS1P23219 599 aa12.78□□□□□ -0.36
NEDD8-204ENST00000526430 CPT1AP50416 773 aa12.78□□□□□ -0.36
NEDD8-204ENST00000526430 ANTXR2P58335 489 aa12.78□□□□□ -0.36
NEDD8-204ENST00000526430 DUSP28Q4G0W2 176 aa12.78□□□□□ -0.36
NEDD8-204ENST00000526430 RCSD1Q6JBY9 416 aa12.78□□□□□ -0.36
NEDD8-204ENST00000526430 CNKSR3Q6P9H4 555 aa12.78□□□□□ -0.36
NEDD8-204ENST00000526430 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
NEDD8-204ENST00000526430 MFSD6Q6ZSS7 791 aa12.78□□□□□ -0.36
NEDD8-204ENST00000526430 CYB5R4Q7L1T6 521 aa12.78□□□□□ -0.36
NEDD8-204ENST00000526430 TMCO2Q7Z6W1 182 aaPredicted RBP12.78□□□□□ -0.36
NEDD8-204ENST00000526430 AMOTL1Q8IY63 956 aa12.78□□□□□ -0.36
NEDD8-204ENST00000526430 MB21D2Q8IYB1 491 aaPredicted RBP12.78□□□□□ -0.36
NEDD8-204ENST00000526430 FBXL6Q8N531 539 aa12.78□□□□□ -0.36
NEDD8-204ENST00000526430 CCDC155Q8N6L0 562 aa12.78□□□□□ -0.36
NEDD8-204ENST00000526430 BANK1Q8NDB2 785 aa12.78□□□□□ -0.36
NEDD8-204ENST00000526430 CAGE1Q8TC20 777 aa12.78□□□□□ -0.36
NEDD8-204ENST00000526430 AFAP1L1Q8TED9 768 aa12.78□□□□□ -0.36
NEDD8-204ENST00000526430 MTG1Q9BT17 334 aaPredicted RBP12.78□□□□□ -0.36
NEDD8-204ENST00000526430 MKNK2Q9HBH9 465 aa12.78□□□□□ -0.36
NEDD8-204ENST00000526430 RAVER2Q9HCJ3 691 aaKnown RBP12.78□□□□□ -0.36
NEDD8-204ENST00000526430 VTA1Q9NP79 307 aa12.78□□□□□ -0.36
NEDD8-204ENST00000526430 SNX14Q9Y5W7 946 aa12.78□□□□□ -0.36
NEDD8-204ENST00000526430 PLIN4Q96Q06 1357 aa12.78□□□□□ -0.36
NEDD8-204ENST00000526430 SOWAHBA6NEL2 793 aa12.77□□□□□ -0.37
NEDD8-204ENST00000526430 B4E1Z4 1266 aa12.77□□□□□ -0.37
NEDD8-204ENST00000526430 NCK2O43639 380 aa12.77□□□□□ -0.37
NEDD8-204ENST00000526430 REC8O95072 547 aa12.77□□□□□ -0.37
NEDD8-204ENST00000526430 CXCL10P02778 98 aa12.77□□□□□ -0.37
NEDD8-204ENST00000526430 PCP11498 1178 aaKnown RBP12.77□□□□□ -0.37
NEDD8-204ENST00000526430 PDE4BQ07343 736 aa12.77□□□□□ -0.37
NEDD8-204ENST00000526430 RBL2Q08999 1139 aa12.77□□□□□ -0.37
NEDD8-204ENST00000526430 GPNMBQ14956 572 aa12.77□□□□□ -0.37
NEDD8-204ENST00000526430 NBPF20Q3BBV1 942 aa12.77□□□□□ -0.37
NEDD8-204ENST00000526430 ZNF444Q8N0Y2 327 aaPredicted RBP12.77□□□□□ -0.37
NEDD8-204ENST00000526430 MKL1Q969V6 931 aa12.77□□□□□ -0.37
NEDD8-204ENST00000526430 IL17RAQ96F46 866 aa12.77□□□□□ -0.37
NEDD8-204ENST00000526430 SAMD11Q96NU1 681 aa12.77□□□□□ -0.37
NEDD8-204ENST00000526430 NUP88Q99567 741 aaPredicted RBP12.77□□□□□ -0.37
NEDD8-204ENST00000526430 ACAD9Q9H845 621 aa12.77□□□□□ -0.37
NEDD8-204ENST00000526430 A1CFQ9NQ94 594 aaKnown RBP12.77□□□□□ -0.37
NEDD8-204ENST00000526430 PDGFCQ9NRA1 345 aa12.77□□□□□ -0.37
NEDD8-204ENST00000526430 TCP11L1Q9NUJ3 509 aa12.77□□□□□ -0.37
NEDD8-204ENST00000526430 FAM86C1Q9NVL1 165 aa12.77□□□□□ -0.37
NEDD8-204ENST00000526430 CTDP1Q9Y5B0 961 aaPredicted RBP12.77□□□□□ -0.37
NEDD8-204ENST00000526430 KIAA1217Q5T5P2 1943 aa12.76□□□□□ -0.37
NEDD8-204ENST00000526430 DMXL1Q9Y485 3027 aa12.76□□□□□ -0.37
NEDD8-204ENST00000526430 TPRP12270 2363 aaKnown RBP12.76□□□□□ -0.37
NEDD8-204ENST00000526430 RAD21O60216 631 aa12.76□□□□□ -0.37
NEDD8-204ENST00000526430 KDM4AO75164 1064 aa12.76□□□□□ -0.37
NEDD8-204ENST00000526430 FDX1P10109 184 aa12.76□□□□□ -0.37
NEDD8-204ENST00000526430 LTBRP36941 435 aa12.76□□□□□ -0.37
NEDD8-204ENST00000526430 SLC4A3P48751 1232 aa12.76□□□□□ -0.37
NEDD8-204ENST00000526430 NUBP1P53384 320 aa12.76□□□□□ -0.37
NEDD8-204ENST00000526430 SEC23AQ15436 765 aa12.76□□□□□ -0.37
NEDD8-204ENST00000526430 TCEAL5Q5H9L2 206 aa12.76□□□□□ -0.37
NEDD8-204ENST00000526430 FBXO16Q8IX29 292 aaPredicted RBP12.76□□□□□ -0.37
NEDD8-204ENST00000526430 SP7Q8TDD2 431 aaPredicted RBP12.76□□□□□ -0.37
NEDD8-204ENST00000526430 MORC4Q8TE76 937 aa12.76□□□□□ -0.37
NEDD8-204ENST00000526430 CEP95Q96GE4 821 aa12.76□□□□□ -0.37
NEDD8-204ENST00000526430 C17orf80Q9BSJ5 609 aa12.76□□□□□ -0.37
NEDD8-204ENST00000526430 BACH2Q9BYV9 841 aa12.76□□□□□ -0.37
NEDD8-204ENST00000526430 NSUN3Q9H649 340 aaKnown RBP12.76□□□□□ -0.37
NEDD8-204ENST00000526430 SENP2Q9HC62 589 aa12.76□□□□□ -0.37
NEDD8-204ENST00000526430 MTMR4Q9NYA4 1195 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms