RNA–Protein interactions for RNA: ENST00000525945.1

GRAMD1B-205, Transcript of GRAM domain containing 1B, humanhuman

TSL 2

Gene GRAMD1B, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-205ENST00000525945 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.6□□□□□ -0.87
GRAMD1B-205ENST00000525945 BDP1A6H8Y1 2624 aa9.6□□□□□ -0.87
GRAMD1B-205ENST00000525945 MYO9BQ13459 2157 aa9.6□□□□□ -0.87
GRAMD1B-205ENST00000525945 WDR19Q8NEZ3 1342 aa9.59□□□□□ -0.87
GRAMD1B-205ENST00000525945 PRRC2BQ5JSZ5 2229 aaKnown RBP9.59□□□□□ -0.87
GRAMD1B-205ENST00000525945 LINC01553A4QN01 128 aa9.59□□□□□ -0.87
GRAMD1B-205ENST00000525945 RANBP6O60518 1105 aaKnown RBP9.59□□□□□ -0.87
GRAMD1B-205ENST00000525945 NMT2O60551 498 aa9.59□□□□□ -0.87
GRAMD1B-205ENST00000525945 MMP3P08254 477 aa9.59□□□□□ -0.87
GRAMD1B-205ENST00000525945 CASTP20810 708 aaKnown RBP9.59□□□□□ -0.87
GRAMD1B-205ENST00000525945 SLC16A2P36021 539 aa9.59□□□□□ -0.87
GRAMD1B-205ENST00000525945 CHMP4BP1P59074 171 aa9.59□□□□□ -0.87
GRAMD1B-205ENST00000525945 RPS6P62753 249 aaKnown RBP9.59□□□□□ -0.87
GRAMD1B-205ENST00000525945 PTPROQ16827 1216 aa9.59□□□□□ -0.87
GRAMD1B-205ENST00000525945 PTCRAQ6ISU1 281 aaPredicted RBP9.59□□□□□ -0.87
GRAMD1B-205ENST00000525945 GDF6Q6KF10 455 aaPredicted RBP9.59□□□□□ -0.87
GRAMD1B-205ENST00000525945 RASGRP2Q7LDG7 609 aa9.59□□□□□ -0.87
GRAMD1B-205ENST00000525945 SPRED2Q7Z698 418 aa9.59□□□□□ -0.87
GRAMD1B-205ENST00000525945 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.59□□□□□ -0.87
GRAMD1B-205ENST00000525945 PPP1R13LQ8WUF5 828 aa9.59□□□□□ -0.87
GRAMD1B-205ENST00000525945 CLEC4DQ8WXI8 215 aa9.59□□□□□ -0.87
GRAMD1B-205ENST00000525945 COPS5Q92905 334 aa9.59□□□□□ -0.87
GRAMD1B-205ENST00000525945 UIMC1Q96RL1 719 aa9.59□□□□□ -0.87
GRAMD1B-205ENST00000525945 GTF2IRD1Q9UHL9 959 aa9.59□□□□□ -0.87
GRAMD1B-205ENST00000525945 FAM50BQ9Y247 325 aa9.59□□□□□ -0.87
GRAMD1B-205ENST00000525945 INSL6Q9Y581 213 aa9.59□□□□□ -0.87
GRAMD1B-205ENST00000525945 FRMPD2Q68DX3 1309 aaPredicted RBP9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 TTC41PQ6P2S7 1318 aa9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 GRXCR2A6NFK2 248 aa9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 NBNO60934 754 aa9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 GH1P01241 217 aa9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 TOP1P11387 765 aaKnown RBP9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 CKBP12277 381 aa9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 IL9P15248 144 aa9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 MRE11P49959 708 aa9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 CTDSPL2Q05D32 466 aa9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 GPNMBQ14956 572 aa9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 DGKDQ16760 1214 aa9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 TIGD5Q53EQ6 642 aa9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 ZMYM1Q5SVZ6 1142 aa9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 TSHZ3Q63HK5 1081 aa9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 TTBK2Q6IQ55 1244 aa9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 TMCO2Q7Z6W1 182 aaPredicted RBP9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 C7orf31Q8N865 590 aa9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 FBXO22Q8NEZ5 403 aa9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 AFG1LQ8WV93 481 aa9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 SAMD11Q96NU1 681 aa9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 SEC62Q99442 399 aaKnown RBP9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 FSD1Q9BTV5 496 aa9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 ANAPC4Q9UJX5 808 aa9.58□□□□□ -0.88
GRAMD1B-205ENST00000525945 EMSYQ7Z589 1322 aa9.57□□□□□ -0.88
GRAMD1B-205ENST00000525945 DCXO43602 365 aa9.57□□□□□ -0.88
GRAMD1B-205ENST00000525945 ORC4O43929 436 aa9.57□□□□□ -0.88
GRAMD1B-205ENST00000525945 ARIH2O95376 493 aa9.57□□□□□ -0.88
GRAMD1B-205ENST00000525945 AMHP03971 560 aa9.57□□□□□ -0.88
GRAMD1B-205ENST00000525945 PDHBP11177 359 aa9.57□□□□□ -0.88
GRAMD1B-205ENST00000525945 PTK7Q13308 1070 aa9.57□□□□□ -0.88
GRAMD1B-205ENST00000525945 CCDC62Q6P9F0 684 aa9.57□□□□□ -0.88
GRAMD1B-205ENST00000525945 RGS22Q8NE09 1264 aa9.57□□□□□ -0.88
GRAMD1B-205ENST00000525945 NEK9Q8TD19 979 aa9.57□□□□□ -0.88
GRAMD1B-205ENST00000525945 DHX38Q92620 1227 aaKnown RBP9.57□□□□□ -0.88
GRAMD1B-205ENST00000525945 MRPL38Q96DV4 380 aaKnown RBP9.57□□□□□ -0.88
GRAMD1B-205ENST00000525945 CTAGE1Q96RT6 745 aa9.57□□□□□ -0.88
GRAMD1B-205ENST00000525945 GPCPD1Q9NPB8 672 aa9.57□□□□□ -0.88
GRAMD1B-205ENST00000525945 TOMM22Q9NS69 142 aa9.57□□□□□ -0.88
GRAMD1B-205ENST00000525945 TCP11L1Q9NUJ3 509 aa9.57□□□□□ -0.88
GRAMD1B-205ENST00000525945 PRKAG3Q9UGI9 489 aa9.57□□□□□ -0.88
GRAMD1B-205ENST00000525945 LGR5O75473 907 aa9.56□□□□□ -0.88
GRAMD1B-205ENST00000525945 FGRP09769 529 aa9.56□□□□□ -0.88
GRAMD1B-205ENST00000525945 NHLH1Q02575 133 aa9.56□□□□□ -0.88
GRAMD1B-205ENST00000525945 ARHGAP1Q07960 439 aa9.56□□□□□ -0.88
GRAMD1B-205ENST00000525945 ZNF543Q08ER8 600 aa9.56□□□□□ -0.88
GRAMD1B-205ENST00000525945 STXBP2Q15833 593 aa9.56□□□□□ -0.88
GRAMD1B-205ENST00000525945 LY6KQ17RY6 165 aa9.56□□□□□ -0.88
GRAMD1B-205ENST00000525945 GPATCH4Q5T3I0 446 aaKnown RBP9.56□□□□□ -0.88
GRAMD1B-205ENST00000525945 FAM117BQ6P1L5 589 aa9.56□□□□□ -0.88
GRAMD1B-205ENST00000525945 NSUN6Q8TEA1 469 aaKnown RBP9.56□□□□□ -0.88
GRAMD1B-205ENST00000525945 KAT2BQ92831 832 aa9.56□□□□□ -0.88
GRAMD1B-205ENST00000525945 EMID1Q96A84 441 aaPredicted RBP9.56□□□□□ -0.88
GRAMD1B-205ENST00000525945 IWS1Q96ST2 819 aa9.56□□□□□ -0.88
GRAMD1B-205ENST00000525945 TMEM47Q9BQJ4 181 aa9.56□□□□□ -0.88
GRAMD1B-205ENST00000525945 C17orf80Q9BSJ5 609 aa9.56□□□□□ -0.88
GRAMD1B-205ENST00000525945 UPF3BQ9BZI7 483 aaKnown RBP9.56□□□□□ -0.88
GRAMD1B-205ENST00000525945 DCTPP1Q9H773 170 aa9.56□□□□□ -0.88
GRAMD1B-205ENST00000525945 HDAC6Q9UBN7 1215 aa9.56□□□□□ -0.88
GRAMD1B-205ENST00000525945 COL4A6Q14031 1691 aa9.55□□□□□ -0.88
GRAMD1B-205ENST00000525945 POTEB3A0JP26 581 aa9.55□□□□□ -0.88
GRAMD1B-205ENST00000525945 NCK2O43639 380 aa9.55□□□□□ -0.88
GRAMD1B-205ENST00000525945 F2P00734 622 aa9.55□□□□□ -0.88
GRAMD1B-205ENST00000525945 PSEN2P49810 448 aa9.55□□□□□ -0.88
GRAMD1B-205ENST00000525945 HTRA4P83105 476 aaPredicted RBP9.55□□□□□ -0.88
GRAMD1B-205ENST00000525945 MFSD10Q14728 455 aa9.55□□□□□ -0.88
GRAMD1B-205ENST00000525945 USH1GQ495M9 461 aa9.55□□□□□ -0.88
GRAMD1B-205ENST00000525945 EPC2Q52LR7 807 aa9.55□□□□□ -0.88
GRAMD1B-205ENST00000525945 ZNF618Q5T7W0 954 aa9.55□□□□□ -0.88
GRAMD1B-205ENST00000525945 POTEBQ6S5H4 581 aa9.55□□□□□ -0.88
GRAMD1B-205ENST00000525945 SEPT14Q6ZU15 432 aa9.55□□□□□ -0.88
GRAMD1B-205ENST00000525945 CHST3Q7LGC8 479 aa9.55□□□□□ -0.88
GRAMD1B-205ENST00000525945 MCF2L2Q86YR7 1114 aa9.55□□□□□ -0.88
GRAMD1B-205ENST00000525945 DHX37Q8IY37 1157 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms