RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 C1orf53Q5VUE5 145 aa14.73□□□□□ -0.05
CLP1-202ENST00000525602 FBXL16Q8N461 479 aa14.73□□□□□ -0.05
CLP1-202ENST00000525602 CCDC82Q8N4S0 544 aa14.73□□□□□ -0.05
CLP1-202ENST00000525602 BRF1Q92994 677 aa14.73□□□□□ -0.05
CLP1-202ENST00000525602 AGXT2Q9BYV1 514 aa14.73□□□□□ -0.05
CLP1-202ENST00000525602 WDR11Q9BZH6 1224 aa14.73□□□□□ -0.05
CLP1-202ENST00000525602 NAP1L2Q9ULW6 460 aaPredicted RBP14.73□□□□□ -0.05
CLP1-202ENST00000525602 Q9Y3F1 56 aa14.73□□□□□ -0.05
CLP1-202ENST00000525602 DYNC1LI2O43237 492 aaPredicted RBP14.73□□□□□ -0.05
CLP1-202ENST00000525602 ASGR1P07306 291 aa14.73□□□□□ -0.05
CLP1-202ENST00000525602 FOSL2P15408 326 aa14.73□□□□□ -0.05
CLP1-202ENST00000525602 CDC27P30260 824 aa14.73□□□□□ -0.05
CLP1-202ENST00000525602 SMAD3P84022 425 aaKnown RBP14.73□□□□□ -0.05
CLP1-202ENST00000525602 BEX3Q00994 111 aa14.73□□□□□ -0.05
CLP1-202ENST00000525602 FUT2Q10981 343 aa14.73□□□□□ -0.05
CLP1-202ENST00000525602 PPP2R5BQ15173 497 aa14.73□□□□□ -0.05
CLP1-202ENST00000525602 GNASQ5JWF2 1037 aa14.73□□□□□ -0.05
CLP1-202ENST00000525602 RUFY3Q7L099 469 aa14.73□□□□□ -0.05
CLP1-202ENST00000525602 USP38Q8NB14 1042 aa14.73□□□□□ -0.05
CLP1-202ENST00000525602 PCSK9Q8NBP7 692 aaKnown RBP14.73□□□□□ -0.05
CLP1-202ENST00000525602 SCFD2Q8WU76 684 aa14.73□□□□□ -0.05
CLP1-202ENST00000525602 PDCD2LQ9BRP1 358 aa14.73□□□□□ -0.05
CLP1-202ENST00000525602 AP5M1Q9H0R1 490 aa14.73□□□□□ -0.05
CLP1-202ENST00000525602 ZSWIM6Q9HCJ5 1215 aa14.73□□□□□ -0.05
CLP1-202ENST00000525602 FAM217BQ9NTX9 383 aaPredicted RBP14.73□□□□□ -0.05
CLP1-202ENST00000525602 KIAA1217Q5T5P2 1943 aa14.72□□□□□ -0.05
CLP1-202ENST00000525602 KIAA0355O15063 1070 aa14.72□□□□□ -0.05
CLP1-202ENST00000525602 NR3C2P08235 984 aa14.72□□□□□ -0.05
CLP1-202ENST00000525602 METAP2P50579 478 aaKnown RBP eCLIP14.72□□□□□ -0.05
CLP1-202ENST00000525602 STXBP2Q15833 593 aa14.72□□□□□ -0.05
CLP1-202ENST00000525602 FSCN1Q16658 493 aaKnown RBP14.72□□□□□ -0.05
CLP1-202ENST00000525602 FCHSD1Q86WN1 690 aa14.72□□□□□ -0.05
CLP1-202ENST00000525602 TM6SF1Q9BZW5 370 aa14.72□□□□□ -0.05
CLP1-202ENST00000525602 STARD7Q9NQZ5 370 aa14.72□□□□□ -0.05
CLP1-202ENST00000525602 FRMPD4Q14CM0 1322 aa14.71□□□□□ -0.05
CLP1-202ENST00000525602 GBF1Q92538 1859 aa14.71□□□□□ -0.05
CLP1-202ENST00000525602 NKRFO15226 690 aaKnown RBP eCLIP14.71□□□□□ -0.06
CLP1-202ENST00000525602 ARIH2O95376 493 aa14.71□□□□□ -0.06
CLP1-202ENST00000525602 RAG1P15918 1043 aa14.71□□□□□ -0.06
CLP1-202ENST00000525602 FAAP100Q0VG06 881 aa14.71□□□□□ -0.06
CLP1-202ENST00000525602 TTLL4Q14679 1199 aa14.71□□□□□ -0.06
CLP1-202ENST00000525602 GRIN2CQ14957 1233 aa14.71□□□□□ -0.06
CLP1-202ENST00000525602 PGM5Q15124 567 aa14.71□□□□□ -0.06
CLP1-202ENST00000525602 HEATR3Q7Z4Q2 680 aa14.71□□□□□ -0.06
CLP1-202ENST00000525602 OR6J1Q8NGC5 347 aa14.71□□□□□ -0.06
CLP1-202ENST00000525602 IL31RAQ8NI17 732 aa14.71□□□□□ -0.06
CLP1-202ENST00000525602 GPKOWQ92917 476 aaPredicted RBP eCLIP14.71□□□□□ -0.06
CLP1-202ENST00000525602 GLT1D1Q96MS3 346 aa14.71□□□□□ -0.06
CLP1-202ENST00000525602 TMEM39AQ9NV64 488 aa14.71□□□□□ -0.06
CLP1-202ENST00000525602 CYP46A1Q9Y6A2 500 aa14.71□□□□□ -0.06
CLP1-202ENST00000525602 PIK3CDO00329 1044 aa14.7□□□□□ -0.06
CLP1-202ENST00000525602 EIF3JO75822 258 aaKnown RBP14.7□□□□□ -0.06
CLP1-202ENST00000525602 MYCLP12524 364 aaPredicted RBP14.7□□□□□ -0.06
CLP1-202ENST00000525602 FPGSQ05932 587 aa14.7□□□□□ -0.06
CLP1-202ENST00000525602 MAPK8IP2Q13387 824 aaPredicted RBP14.7□□□□□ -0.06
CLP1-202ENST00000525602 TOB2Q14106 344 aaPredicted RBP14.7□□□□□ -0.06
CLP1-202ENST00000525602 WWC2Q6AWC2 1192 aa14.7□□□□□ -0.06
CLP1-202ENST00000525602 CCDC62Q6P9F0 684 aa14.7□□□□□ -0.06
CLP1-202ENST00000525602 SEPT14Q6ZU15 432 aa14.7□□□□□ -0.06
CLP1-202ENST00000525602 SMARCC2Q8TAQ2 1214 aa14.7□□□□□ -0.06
CLP1-202ENST00000525602 COPS5Q92905 334 aa14.7□□□□□ -0.06
CLP1-202ENST00000525602 CUL5Q93034 780 aa14.7□□□□□ -0.06
CLP1-202ENST00000525602 UPF3BQ9BZI7 483 aaKnown RBP14.7□□□□□ -0.06
CLP1-202ENST00000525602 ELP1O95163 1332 aa14.7□□□□□ -0.06
CLP1-202ENST00000525602 CCDC196A0A1B0GTZ2 297 aa14.69□□□□□ -0.06
CLP1-202ENST00000525602 MEIS2O14770 477 aa14.69□□□□□ -0.06
CLP1-202ENST00000525602 ZEB2O60315 1214 aa14.69□□□□□ -0.06
CLP1-202ENST00000525602 TXNP10599 105 aaKnown RBP14.69□□□□□ -0.06
CLP1-202ENST00000525602 CCND2P30279 289 aa14.69□□□□□ -0.06
CLP1-202ENST00000525602 ADD1P35611 737 aaKnown RBP14.69□□□□□ -0.06
CLP1-202ENST00000525602 EVCP57679 992 aa14.69□□□□□ -0.06
CLP1-202ENST00000525602 USP17L6PQ6QN14 398 aa14.69□□□□□ -0.06
CLP1-202ENST00000525602 CXCL17Q6UXB2 119 aa14.69□□□□□ -0.06
CLP1-202ENST00000525602 PRDM6Q9NQX0 595 aa14.69□□□□□ -0.06
CLP1-202ENST00000525602 A0A0U1RQG5 324 aaPredicted RBP14.68□□□□□ -0.06
CLP1-202ENST00000525602 GRXCR1A8MXD5 290 aa14.68□□□□□ -0.06
CLP1-202ENST00000525602 EIF5BO60841 1220 aaKnown RBP14.68□□□□□ -0.06
CLP1-202ENST00000525602 RGS20O76081 388 aa14.68□□□□□ -0.06
CLP1-202ENST00000525602 DNAJB2P25686 324 aa14.68□□□□□ -0.06
CLP1-202ENST00000525602 PDIA3P30101 505 aaKnown RBP14.68□□□□□ -0.06
CLP1-202ENST00000525602 PBX2P40425 430 aa14.68□□□□□ -0.06
CLP1-202ENST00000525602 CPT1AP50416 773 aa14.68□□□□□ -0.06
CLP1-202ENST00000525602 ANAPC15P60006 121 aa14.68□□□□□ -0.06
CLP1-202ENST00000525602 LY6KQ17RY6 165 aa14.68□□□□□ -0.06
CLP1-202ENST00000525602 TYW1BQ6NUM6 668 aa14.68□□□□□ -0.06
CLP1-202ENST00000525602 PPP1R18Q6NYC8 613 aa14.68□□□□□ -0.06
CLP1-202ENST00000525602 VSIG10LQ86VR7 867 aa14.68□□□□□ -0.06
CLP1-202ENST00000525602 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.68□□□□□ -0.06
CLP1-202ENST00000525602 PSTPIP2Q9H939 334 aa14.68□□□□□ -0.06
CLP1-202ENST00000525602 TBX21Q9UL17 535 aa14.68□□□□□ -0.06
CLP1-202ENST00000525602 V9GY48 417 aaPredicted RBP14.68□□□□□ -0.06
CLP1-202ENST00000525602 NCOR1O75376 2440 aa14.67□□□□□ -0.06
CLP1-202ENST00000525602 CABYRO75952 493 aa14.67□□□□□ -0.06
CLP1-202ENST00000525602 NAPAP54920 295 aa14.67□□□□□ -0.06
CLP1-202ENST00000525602 ARHGAP1Q07960 439 aa14.67□□□□□ -0.06
CLP1-202ENST00000525602 UBE2SQ16763 222 aa14.67□□□□□ -0.06
CLP1-202ENST00000525602 C16orf59Q7L2K0 433 aa14.67□□□□□ -0.06
CLP1-202ENST00000525602 ANKRD33Q7Z3H0 272 aa14.67□□□□□ -0.06
CLP1-202ENST00000525602 VTI1AQ96AJ9 217 aa14.67□□□□□ -0.06
CLP1-202ENST00000525602 PDRG1Q9NUG6 133 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms