RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 CMTR1Q8N1G2 835 aaKnown RBP21.45■■□□□ 1.02
CAPN1-203ENST00000525013 ALDH8A1Q9H2A2 487 aaPredicted RBP21.45■■□□□ 1.02
CAPN1-203ENST00000525013 DDX41Q9UJV9 622 aaKnown RBP21.45■■□□□ 1.02
CAPN1-203ENST00000525013 CSF2RAP15509 400 aa21.44■■□□□ 1.02
CAPN1-203ENST00000525013 SMARCA1P28370 1054 aa21.44■■□□□ 1.02
CAPN1-203ENST00000525013 ARHGAP1Q07960 439 aa21.44■■□□□ 1.02
CAPN1-203ENST00000525013 PGM5Q15124 567 aa21.44■■□□□ 1.02
CAPN1-203ENST00000525013 NBPF20Q3BBV1 942 aa21.44■■□□□ 1.02
CAPN1-203ENST00000525013 SYNE3Q6ZMZ3 975 aa21.44■■□□□ 1.02
CAPN1-203ENST00000525013 RASEFQ8IZ41 740 aa21.44■■□□□ 1.02
CAPN1-203ENST00000525013 SRBD1Q8N5C6 995 aaKnown RBP21.44■■□□□ 1.02
CAPN1-203ENST00000525013 IL31RAQ8NI17 732 aa21.44■■□□□ 1.02
CAPN1-203ENST00000525013 PPP1R13LQ8WUF5 828 aa21.44■■□□□ 1.02
CAPN1-203ENST00000525013 TRMT13Q9NUP7 481 aaKnown RBP21.44■■□□□ 1.02
CAPN1-203ENST00000525013 CCND2P30279 289 aa21.43■■□□□ 1.02
CAPN1-203ENST00000525013 VSIG10LQ86VR7 867 aa21.43■■□□□ 1.02
CAPN1-203ENST00000525013 MICU3Q86XE3 530 aa21.43■■□□□ 1.02
CAPN1-203ENST00000525013 CCDC82Q8N4S0 544 aa21.43■■□□□ 1.02
CAPN1-203ENST00000525013 FANCBQ8NB91 859 aa21.43■■□□□ 1.02
CAPN1-203ENST00000525013 ZFP91Q96JP5 570 aaPredicted RBP21.43■■□□□ 1.02
CAPN1-203ENST00000525013 TCEANC2Q96MN5 208 aa21.43■■□□□ 1.02
CAPN1-203ENST00000525013 MMP3P08254 477 aa21.42■■□□□ 1.02
CAPN1-203ENST00000525013 SUPT20HL2P0C7V6 817 aa21.42■■□□□ 1.02
CAPN1-203ENST00000525013 ACRP10323 421 aa21.42■■□□□ 1.02
CAPN1-203ENST00000525013 KRT32Q14532 448 aa21.42■■□□□ 1.02
CAPN1-203ENST00000525013 UMODL1Q5DID0 1318 aa21.42■■□□□ 1.02
CAPN1-203ENST00000525013 DHX32Q7L7V1 743 aaKnown RBP21.42■■□□□ 1.02
CAPN1-203ENST00000525013 SGMS1Q86VZ5 419 aa21.42■■□□□ 1.02
CAPN1-203ENST00000525013 CUL5Q93034 780 aa21.42■■□□□ 1.02
CAPN1-203ENST00000525013 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.42■■□□□ 1.023e-8■□□□□ 9.8
CAPN1-203ENST00000525013 NOC4LQ9BVI4 516 aaKnown RBP21.42■■□□□ 1.02
CAPN1-203ENST00000525013 MTMR10Q9NXD2 777 aa21.42■■□□□ 1.02
CAPN1-203ENST00000525013 hCG_1642624A0A1W2PR95 340 aa21.41■■□□□ 1.02
CAPN1-203ENST00000525013 CYP2C9P11712 490 aa21.41■■□□□ 1.02
CAPN1-203ENST00000525013 CCL23P55773 120 aa21.41■■□□□ 1.02
CAPN1-203ENST00000525013 LAMC2Q13753 1193 aa21.41■■□□□ 1.02
CAPN1-203ENST00000525013 ADCK5Q3MIX3 580 aa21.41■■□□□ 1.02
CAPN1-203ENST00000525013 NFRKBQ6P4R8 1299 aa21.41■■□□□ 1.02
CAPN1-203ENST00000525013 KCNV1Q6PIU1 500 aa21.41■■□□□ 1.02
CAPN1-203ENST00000525013 DHX37Q8IY37 1157 aaKnown RBP21.41■■□□□ 1.02
CAPN1-203ENST00000525013 SMARCC2Q8TAQ2 1214 aa21.41■■□□□ 1.02
CAPN1-203ENST00000525013 FAM161BQ96MY7 647 aa21.41■■□□□ 1.02
CAPN1-203ENST00000525013 SORBS3O60504 671 aa21.4■■□□□ 1.02
CAPN1-203ENST00000525013 RGS20O76081 388 aa21.4■■□□□ 1.02
CAPN1-203ENST00000525013 CASTP20810 708 aaKnown RBP21.4■■□□□ 1.02
CAPN1-203ENST00000525013 SMAD3P84022 425 aaKnown RBP21.4■■□□□ 1.02
CAPN1-203ENST00000525013 EXOSC10Q01780 885 aaKnown RBP21.4■■□□□ 1.02
CAPN1-203ENST00000525013 DGKDQ16760 1214 aa21.4■■□□□ 1.02
CAPN1-203ENST00000525013 TSGA10IPQ3SY00 556 aa21.4■■□□□ 1.02
CAPN1-203ENST00000525013 TMEM240Q5SV17 173 aa21.4■■□□□ 1.02
CAPN1-203ENST00000525013 ZNF697Q5TEC3 545 aa21.4■■□□□ 1.02
CAPN1-203ENST00000525013 FAM109BQ6ICB4 259 aaPredicted RBP21.4■■□□□ 1.02
CAPN1-203ENST00000525013 USP17L6PQ6QN14 398 aa21.4■■□□□ 1.02
CAPN1-203ENST00000525013 TMTC3Q6ZXV5 915 aa21.4■■□□□ 1.02
CAPN1-203ENST00000525013 C16orf59Q7L2K0 433 aa21.4■■□□□ 1.02
CAPN1-203ENST00000525013 TRIP12Q14669 1992 aaPredicted RBP21.39■■□□□ 1.02
CAPN1-203ENST00000525013 MYO9BQ13459 2157 aa21.39■■□□□ 1.01
CAPN1-203ENST00000525013 FGD1P98174 961 aa21.39■■□□□ 1.01
CAPN1-203ENST00000525013 PSRC1Q6PGN9 363 aaPredicted RBP21.39■■□□□ 1.01
CAPN1-203ENST00000525013 APOA5Q6Q788 366 aa21.39■■□□□ 1.01
CAPN1-203ENST00000525013 ZNF365Q70YC5 407 aa21.39■■□□□ 1.01
CAPN1-203ENST00000525013 IL23AQ9NPF7 189 aa21.39■■□□□ 1.01
CAPN1-203ENST00000525013 NOD1Q9Y239 953 aa21.39■■□□□ 1.01
CAPN1-203ENST00000525013 PTPN11Q06124 597 aaPredicted RBP21.38■■□□□ 1.01
CAPN1-203ENST00000525013 PPTC7Q8NI37 304 aa21.38■■□□□ 1.01
CAPN1-203ENST00000525013 EMID1Q96A84 441 aaPredicted RBP21.38■■□□□ 1.01
CAPN1-203ENST00000525013 SPATA33Q96N06 139 aa21.38■■□□□ 1.01
CAPN1-203ENST00000525013 WNT8AQ9H1J5 351 aa21.38■■□□□ 1.01
CAPN1-203ENST00000525013 PSTPIP2Q9H939 334 aa21.38■■□□□ 1.01
CAPN1-203ENST00000525013 NAP1L2Q9ULW6 460 aaPredicted RBP21.38■■□□□ 1.01
CAPN1-203ENST00000525013 ZBTB43O43298 467 aa21.37■■□□□ 1.01
CAPN1-203ENST00000525013 GGPS1O95749 300 aa21.37■■□□□ 1.01
CAPN1-203ENST00000525013 HMGB1P09429 215 aaKnown RBP21.37■■□□□ 1.01
CAPN1-203ENST00000525013 TGFB3P10600 412 aa21.37■■□□□ 1.01
CAPN1-203ENST00000525013 RTN1Q16799 776 aa21.37■■□□□ 1.01
CAPN1-203ENST00000525013 CELF3Q5SZQ8 465 aaKnown RBP21.37■■□□□ 1.01
CAPN1-203ENST00000525013 MYSM1Q5VVJ2 828 aa21.37■■□□□ 1.01
CAPN1-203ENST00000525013 HEATR3Q7Z4Q2 680 aa21.37■■□□□ 1.01
CAPN1-203ENST00000525013 GPKOWQ92917 476 aaPredicted RBP eCLIP21.37■■□□□ 1.01
CAPN1-203ENST00000525013 SCLYQ96I15 445 aa21.37■■□□□ 1.01
CAPN1-203ENST00000525013 RBM28Q9NW13 759 aaKnown RBP21.37■■□□□ 1.01
CAPN1-203ENST00000525013 RTEL1Q9NZ71 1219 aa21.37■■□□□ 1.01
CAPN1-203ENST00000525013 BRPF3Q9ULD4 1205 aa21.37■■□□□ 1.01
CAPN1-203ENST00000525013 COL6A3P12111 3177 aa21.37■■□□□ 1.01
CAPN1-203ENST00000525013 DOCK5Q9H7D0 1870 aa21.37■■□□□ 1.01
CAPN1-203ENST00000525013 SCN5AQ14524 2016 aa21.36■■□□□ 1.01
CAPN1-203ENST00000525013 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.36■■□□□ 1.01
CAPN1-203ENST00000525013 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.36■■□□□ 1.01
CAPN1-203ENST00000525013 PIK3CDO00329 1044 aa21.36■■□□□ 1.01
CAPN1-203ENST00000525013 MEIS2O14770 477 aa21.36■■□□□ 1.01
CAPN1-203ENST00000525013 FGBP02675 491 aa21.36■■□□□ 1.01
CAPN1-203ENST00000525013 ZNF286BP0CG31 522 aa21.36■■□□□ 1.01
CAPN1-203ENST00000525013 UBA1P22314 1058 aaKnown RBP21.36■■□□□ 1.01
CAPN1-203ENST00000525013 MRPS9P82933 396 aaKnown RBP21.36■■□□□ 1.01
CAPN1-203ENST00000525013 SP2Q02086 613 aa21.36■■□□□ 1.01
CAPN1-203ENST00000525013 GNPTABQ3T906 1256 aa21.36■■□□□ 1.01
CAPN1-203ENST00000525013 RPUSD2Q8IZ73 545 aaKnown RBP21.36■■□□□ 1.01
CAPN1-203ENST00000525013 KAT2BQ92831 832 aa21.36■■□□□ 1.01
CAPN1-203ENST00000525013 JAKMIP1Q96N16 626 aaKnown RBP21.36■■□□□ 1.01
CAPN1-203ENST00000525013 ALG1Q9BT22 464 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms