RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	BAAT	Q14032	418 aa	Predicted RBP	12.76	□□□□□ -0.37
SORBS3-222	ENST00000524057	CLUL1	Q15846	466 aa		12.76	□□□□□ -0.37
SORBS3-222	ENST00000524057	CTC1	Q2NKJ3	1217 aa		12.76	□□□□□ -0.37
SORBS3-222	ENST00000524057	ZNF444	Q8N0Y2	327 aa	Predicted RBP	12.76	□□□□□ -0.37
SORBS3-222	ENST00000524057	SP7	Q8TDD2	431 aa	Predicted RBP	12.76	□□□□□ -0.37
SORBS3-222	ENST00000524057	CHMP4C	Q96CF2	233 aa		12.76	□□□□□ -0.37
SORBS3-222	ENST00000524057	STRBP	Q96SI9	672 aa	Known RBP	12.76	□□□□□ -0.37
SORBS3-222	ENST00000524057	POP1	Q99575	1024 aa	Known RBP	12.76	□□□□□ -0.37
SORBS3-222	ENST00000524057	OSBPL3	Q9H4L5	887 aa		12.76	□□□□□ -0.37
SORBS3-222	ENST00000524057	NSUN3	Q9H649	340 aa	Known RBP	12.76	□□□□□ -0.37
SORBS3-222	ENST00000524057	ADD3	Q9UEY8	706 aa	Known RBP	12.76	□□□□□ -0.37
SORBS3-222	ENST00000524057	GTF3C3	Q9Y5Q9	886 aa		12.76	□□□□□ -0.37
SORBS3-222	ENST00000524057	ZDBF2	Q9HCK1	2354 aa		12.76	□□□□□ -0.37
SORBS3-222	ENST00000524057	NKRF	O15226	690 aa	Known RBP eCLIP	12.75	□□□□□ -0.37
SORBS3-222	ENST00000524057	PRDM1	O75626	825 aa		12.75	□□□□□ -0.37
SORBS3-222	ENST00000524057	MCC	P23508	829 aa		12.75	□□□□□ -0.37
SORBS3-222	ENST00000524057	RBL2	Q08999	1139 aa		12.75	□□□□□ -0.37
SORBS3-222	ENST00000524057	TRAF7	Q6Q0C0	670 aa		12.75	□□□□□ -0.37
SORBS3-222	ENST00000524057	RPAIN	Q86UA6	219 aa		12.75	□□□□□ -0.37
SORBS3-222	ENST00000524057	FAM160B2	Q86V87	743 aa		12.75	□□□□□ -0.37
SORBS3-222	ENST00000524057	SESTD1	Q86VW0	696 aa		12.75	□□□□□ -0.37
SORBS3-222	ENST00000524057	SUGP1	Q8IWZ8	645 aa	Known RBP	12.75	□□□□□ -0.37
SORBS3-222	ENST00000524057	FBXL6	Q8N531	539 aa		12.75	□□□□□ -0.37
SORBS3-222	ENST00000524057	ATOH1	Q92858	354 aa	Predicted RBP	12.75	□□□□□ -0.37
SORBS3-222	ENST00000524057	SAMD11	Q96NU1	681 aa		12.75	□□□□□ -0.37
SORBS3-222	ENST00000524057	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	12.75	□□□□□ -0.37
SORBS3-222	ENST00000524057	ISY1	Q9ULR0	285 aa	Known RBP	12.75	□□□□□ -0.37
SORBS3-222	ENST00000524057	SPTBN4	Q9H254	2564 aa		12.75	□□□□□ -0.37
SORBS3-222	ENST00000524057	RAD50	Q92878	1312 aa		12.74	□□□□□ -0.37
SORBS3-222	ENST00000524057	GSG1L2	A8MUP6	293 aa		12.74	□□□□□ -0.37
SORBS3-222	ENST00000524057	STXBP3	O00186	592 aa		12.74	□□□□□ -0.37
SORBS3-222	ENST00000524057	RNF113A	O15541	343 aa	Known RBP	12.74	□□□□□ -0.37
SORBS3-222	ENST00000524057	NCK2	O43639	380 aa		12.74	□□□□□ -0.37
SORBS3-222	ENST00000524057	PLA2G6	O60733	806 aa		12.74	□□□□□ -0.37
SORBS3-222	ENST00000524057	IK	Q13123	557 aa	Predicted RBP	12.74	□□□□□ -0.37
SORBS3-222	ENST00000524057	MBTPS1	Q14703	1052 aa		12.74	□□□□□ -0.37
SORBS3-222	ENST00000524057	TMEM192	Q8IY95	271 aa		12.74	□□□□□ -0.37
SORBS3-222	ENST00000524057	KAT2B	Q92831	832 aa		12.74	□□□□□ -0.37
SORBS3-222	ENST00000524057	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	12.74	□□□□□ -0.37
SORBS3-222	ENST00000524057	PRR12	Q9ULL5	1215 aa		12.74	□□□□□ -0.37
SORBS3-222	ENST00000524057	DMD	P11532	3685 aa		12.74	□□□□□ -0.37
SORBS3-222	ENST00000524057	LOC102724159	A0A0B4J2E5	919 aa		12.73	□□□□□ -0.37
SORBS3-222	ENST00000524057	AMH	P03971	560 aa		12.73	□□□□□ -0.37
SORBS3-222	ENST00000524057	TXN	P10599	105 aa	Known RBP	12.73	□□□□□ -0.37
SORBS3-222	ENST00000524057	SLC1A4	P43007	532 aa		12.73	□□□□□ -0.37
SORBS3-222	ENST00000524057	ZXDA	P98168	799 aa		12.73	□□□□□ -0.37
SORBS3-222	ENST00000524057	MKRN4P	Q13434	485 aa	Predicted RBP	12.73	□□□□□ -0.37
SORBS3-222	ENST00000524057	PPP2R5B	Q15173	497 aa		12.73	□□□□□ -0.37
SORBS3-222	ENST00000524057	PWP2	Q15269	919 aa	Known RBP	12.73	□□□□□ -0.37
SORBS3-222	ENST00000524057	ZMYM1	Q5SVZ6	1142 aa		12.73	□□□□□ -0.37
SORBS3-222	ENST00000524057	ZNF618	Q5T7W0	954 aa		12.73	□□□□□ -0.37
SORBS3-222	ENST00000524057	RCSD1	Q6JBY9	416 aa		12.73	□□□□□ -0.37
SORBS3-222	ENST00000524057	KCTD1	Q719H9	257 aa		12.73	□□□□□ -0.37
SORBS3-222	ENST00000524057	MYOCD	Q8IZQ8	938 aa		12.73	□□□□□ -0.37
SORBS3-222	ENST00000524057	DBF4B	Q8NFT6	615 aa		12.73	□□□□□ -0.37
SORBS3-222	ENST00000524057	SCFD2	Q8WU76	684 aa		12.73	□□□□□ -0.37
SORBS3-222	ENST00000524057	APPBP2	Q92624	585 aa		12.73	□□□□□ -0.37
SORBS3-222	ENST00000524057	GMCL1	Q96IK5	515 aa		12.73	□□□□□ -0.37
SORBS3-222	ENST00000524057	CCPG1	Q9ULG6	757 aa		12.73	□□□□□ -0.37
SORBS3-222	ENST00000524057	LGR5	O75473	907 aa		12.72	□□□□□ -0.37
SORBS3-222	ENST00000524057	GSPT1	P15170	499 aa	Known RBP	12.72	□□□□□ -0.37
SORBS3-222	ENST00000524057	AVPR2	P30518	371 aa		12.72	□□□□□ -0.37
SORBS3-222	ENST00000524057	VCP	P55072	806 aa	Known RBP	12.72	□□□□□ -0.37
SORBS3-222	ENST00000524057	HYAL1	Q12794	435 aa		12.72	□□□□□ -0.37
SORBS3-222	ENST00000524057	TRIM71	Q2Q1W2	868 aa	Known RBP	12.72	□□□□□ -0.37
SORBS3-222	ENST00000524057	ERMP1	Q7Z2K6	904 aa		12.72	□□□□□ -0.37
SORBS3-222	ENST00000524057	FBXO11	Q86XK2	927 aa		12.72	□□□□□ -0.37
SORBS3-222	ENST00000524057	NEDD1	Q8NHV4	660 aa		12.72	□□□□□ -0.37
SORBS3-222	ENST00000524057	AFG1L	Q8WV93	481 aa		12.72	□□□□□ -0.37
SORBS3-222	ENST00000524057	WNT8B	Q93098	351 aa		12.72	□□□□□ -0.37
SORBS3-222	ENST00000524057	GPATCH3	Q96I76	525 aa		12.72	□□□□□ -0.37
SORBS3-222	ENST00000524057	IRF2BPL	Q9H1B7	796 aa		12.72	□□□□□ -0.37
SORBS3-222	ENST00000524057	IL25	Q9H293	177 aa		12.72	□□□□□ -0.37
SORBS3-222	ENST00000524057	HDAC6	Q9UBN7	1215 aa		12.72	□□□□□ -0.37
SORBS3-222	ENST00000524057	GTF2IRD1	Q9UHL9	959 aa		12.72	□□□□□ -0.37
SORBS3-222	ENST00000524057	PTPRZ1	P23471	2315 aa	Predicted RBP	12.71	□□□□□ -0.37
SORBS3-222	ENST00000524057	DCHS1	Q96JQ0	3298 aa		12.71	□□□□□ -0.37
SORBS3-222	ENST00000524057	LCT	P09848	1927 aa		12.71	□□□□□ -0.37
SORBS3-222	ENST00000524057	MYH4	Q9Y623	1939 aa		12.71	□□□□□ -0.37
SORBS3-222	ENST00000524057	PTPDC1	A2A3K4	754 aa		12.71	□□□□□ -0.37
SORBS3-222	ENST00000524057	PROB1	E7EW31	1015 aa		12.71	□□□□□ -0.37
SORBS3-222	ENST00000524057		H0Y858	1186 aa		12.71	□□□□□ -0.37
SORBS3-222	ENST00000524057	NFIB	O00712	420 aa		12.71	□□□□□ -0.37
SORBS3-222	ENST00000524057	ARIH2	O95376	493 aa		12.71	□□□□□ -0.37
SORBS3-222	ENST00000524057	ICAM1	P05362	532 aa		12.71	□□□□□ -0.37
SORBS3-222	ENST00000524057	GTF2F1	P35269	517 aa	Known RBP eCLIP	12.71	□□□□□ -0.37
SORBS3-222	ENST00000524057	PDE4B	Q07343	736 aa		12.71	□□□□□ -0.37
SORBS3-222	ENST00000524057	PDE4D	Q08499	809 aa		12.71	□□□□□ -0.37
SORBS3-222	ENST00000524057	SMAD4	Q13485	552 aa	Known RBP	12.71	□□□□□ -0.37
SORBS3-222	ENST00000524057	GIMAP6	Q6P9H5	292 aa		12.71	□□□□□ -0.37
SORBS3-222	ENST00000524057	ASCL5	Q7RTU5	278 aa		12.71	□□□□□ -0.37
SORBS3-222	ENST00000524057	TOP1MT	Q969P6	601 aa		12.71	□□□□□ -0.37
SORBS3-222	ENST00000524057	FAM227B	Q96M60	508 aa		12.71	□□□□□ -0.37
SORBS3-222	ENST00000524057	TLR9	Q9NR96	1032 aa		12.71	□□□□□ -0.37
SORBS3-222	ENST00000524057		A0A0D9SFI3	127 aa		12.7	□□□□□ -0.38
SORBS3-222	ENST00000524057	LINC01565	O15544	149 aa		12.7	□□□□□ -0.38
SORBS3-222	ENST00000524057	GPAA1	O43292	621 aa		12.7	□□□□□ -0.38
SORBS3-222	ENST00000524057	TBX10	O75333	385 aa		12.7	□□□□□ -0.38
SORBS3-222	ENST00000524057	UPP2	O95045	317 aa		12.7	□□□□□ -0.38
SORBS3-222	ENST00000524057	MMP3	P08254	477 aa		12.7	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms