RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 LINC01553A4QN01 128 aa9.32□□□□□ -0.92
NSMCE2-213ENST00000523824 NBNO60934 754 aa9.32□□□□□ -0.92
NSMCE2-213ENST00000523824 CXCL10P02778 98 aa9.32□□□□□ -0.92
NSMCE2-213ENST00000523824 MMP3P08254 477 aa9.32□□□□□ -0.92
NSMCE2-213ENST00000523824 CKBP12277 381 aa9.32□□□□□ -0.92
NSMCE2-213ENST00000523824 DGKDQ16760 1214 aa9.32□□□□□ -0.92
NSMCE2-213ENST00000523824 PTCRAQ6ISU1 281 aaPredicted RBP9.32□□□□□ -0.92
NSMCE2-213ENST00000523824 CCDC62Q6P9F0 684 aa9.32□□□□□ -0.92
NSMCE2-213ENST00000523824 FBXO22Q8NEZ5 403 aa9.32□□□□□ -0.92
NSMCE2-213ENST00000523824 ALG1Q9BT22 464 aa9.32□□□□□ -0.92
NSMCE2-213ENST00000523824 GTF2IRD1Q9UHL9 959 aa9.32□□□□□ -0.92
NSMCE2-213ENST00000523824 CTNNA3Q9UI47 895 aa9.32□□□□□ -0.92
NSMCE2-213ENST00000523824 INSL6Q9Y581 213 aa9.32□□□□□ -0.92
NSMCE2-213ENST00000523824 MUC6Q6W4X9 2439 aa9.32□□□□□ -0.92
NSMCE2-213ENST00000523824 WDR19Q8NEZ3 1342 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 FGRP09769 529 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 PRR29P0C7W0 189 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 PDHBP11177 359 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 IL9P15248 144 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 PSEN2P49810 448 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 ARHGAP1Q07960 439 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 RBL2Q08999 1139 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 ZNF543Q08ER8 600 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 STXBP2Q15833 593 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 PTPROQ16827 1216 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 PUS10Q3MIT2 529 aaKnown RBP9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 USH1GQ495M9 461 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 C20orf194Q5TEA3 1177 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 VPS53Q5VIR6 699 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 RGS22Q8NE09 1264 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 PI4K2BQ8TCG2 481 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 DHX38Q92620 1227 aaKnown RBP9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 KAT2BQ92831 832 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 TAAR1Q96RJ0 339 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 CTAGE1Q96RT6 745 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 KATNAL1Q9BW62 490 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 TCP11L1Q9NUJ3 509 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 HDAC6Q9UBN7 1215 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 RCAN3Q9UKA8 241 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 SCN10AQ9Y5Y9 1956 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 LCTP09848 1927 aa9.31□□□□□ -0.92
NSMCE2-213ENST00000523824 GRXCR2A6NFK2 248 aa9.3□□□□□ -0.92
NSMCE2-213ENST00000523824 FOXP2O15409 715 aa9.3□□□□□ -0.92
NSMCE2-213ENST00000523824 LGR5O75473 907 aa9.3□□□□□ -0.92
NSMCE2-213ENST00000523824 AMHP03971 560 aa9.3□□□□□ -0.92
NSMCE2-213ENST00000523824 PTK7Q13308 1070 aa9.3□□□□□ -0.92
NSMCE2-213ENST00000523824 ALX1Q15699 326 aa9.3□□□□□ -0.92
NSMCE2-213ENST00000523824 TCTN1Q2MV58 587 aa9.3□□□□□ -0.92
NSMCE2-213ENST00000523824 ZNF618Q5T7W0 954 aa9.3□□□□□ -0.92
NSMCE2-213ENST00000523824 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.3□□□□□ -0.92
NSMCE2-213ENST00000523824 EP400NLQ6ZTU2 488 aa9.3□□□□□ -0.92
NSMCE2-213ENST00000523824 MCF2L2Q86YR7 1114 aa9.3□□□□□ -0.92
NSMCE2-213ENST00000523824 MYOCDQ8IZQ8 938 aa9.3□□□□□ -0.92
NSMCE2-213ENST00000523824 OTUD7AQ8TE49 926 aaPredicted RBP9.3□□□□□ -0.92
NSMCE2-213ENST00000523824 NSUN6Q8TEA1 469 aaKnown RBP9.3□□□□□ -0.92
NSMCE2-213ENST00000523824 TBC1D5Q92609 795 aa9.3□□□□□ -0.92
NSMCE2-213ENST00000523824 MRPL38Q96DV4 380 aaKnown RBP9.3□□□□□ -0.92
NSMCE2-213ENST00000523824 TTC14Q96N46 770 aa9.3□□□□□ -0.92
NSMCE2-213ENST00000523824 IWS1Q96ST2 819 aa9.3□□□□□ -0.92
NSMCE2-213ENST00000523824 RMDN3Q96TC7 470 aa9.3□□□□□ -0.92
NSMCE2-213ENST00000523824 C17orf80Q9BSJ5 609 aa9.3□□□□□ -0.92
NSMCE2-213ENST00000523824 FAM50BQ9Y247 325 aa9.3□□□□□ -0.92
NSMCE2-213ENST00000523824 TANC1Q9C0D5 1861 aa9.3□□□□□ -0.92
NSMCE2-213ENST00000523824 TET1Q8NFU7 2136 aa9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 H3BQ06 376 aaPredicted RBP9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 FGAP02671 866 aa9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 GOLGA8HP0CJ92 632 aa9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 MX1P20591 662 aa9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 MRE11P49959 708 aa9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 ZNF200P98182 395 aaPredicted RBP9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 LAMC2Q13753 1193 aa9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 MFSD10Q14728 455 aa9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 KIAA0753Q2KHM9 967 aa9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 GPATCH4Q5T3I0 446 aaKnown RBP9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 ARHGEF16Q5VV41 709 aa9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 MFSD6Q6ZSS7 791 aa9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 DHX37Q8IY37 1157 aaKnown RBP9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 MIER1Q8N108 512 aa9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 SYTL5Q8TDW5 730 aaPredicted RBP9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 SAMD11Q96NU1 681 aa9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 UBA5Q9GZZ9 404 aa9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 MAF1Q9H063 256 aa9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 HELLSQ9NRZ9 838 aa9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 ZBTB47Q9UFB7 747 aaPredicted RBP9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 DDX41Q9UJV9 622 aaKnown RBP9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 MRVI1Q9Y6F6 885 aa9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 COL4A4P53420 1690 aaPredicted RBP9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 ABCB11O95342 1321 aa9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 EMSYQ7Z589 1322 aa9.29□□□□□ -0.92
NSMCE2-213ENST00000523824 RSPH10B2B2RC85 870 aa9.28□□□□□ -0.92
NSMCE2-213ENST00000523824 DCXO43602 365 aa9.28□□□□□ -0.92
NSMCE2-213ENST00000523824 EIF3JO75822 258 aaKnown RBP9.28□□□□□ -0.92
NSMCE2-213ENST00000523824 RSPH10BP0C881 870 aa9.28□□□□□ -0.92
NSMCE2-213ENST00000523824 ZNF286BP0CG31 522 aa9.28□□□□□ -0.92
NSMCE2-213ENST00000523824 SNHG28P0DPA3 235 aa9.28□□□□□ -0.92
NSMCE2-213ENST00000523824 EIF2AK2P19525 551 aaKnown RBP9.28□□□□□ -0.92
NSMCE2-213ENST00000523824 THPOP40225 353 aa9.28□□□□□ -0.92
NSMCE2-213ENST00000523824 HAND2P61296 217 aa9.28□□□□□ -0.92
NSMCE2-213ENST00000523824 GPM6BQ13491 265 aa9.28□□□□□ -0.92
NSMCE2-213ENST00000523824 MBTPS1Q14703 1052 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms