RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 PLA2G6O60733 806 aa13.71□□□□□ -0.21
SDCBP-211ENST00000523441 ZNF286BP0CG31 522 aa13.71□□□□□ -0.21
SDCBP-211ENST00000523441 ZNF618Q5T7W0 954 aa13.71□□□□□ -0.21
SDCBP-211ENST00000523441 HFE2Q6ZVN8 426 aa13.71□□□□□ -0.21
SDCBP-211ENST00000523441 DCAF4Q8WV16 495 aa13.71□□□□□ -0.21
SDCBP-211ENST00000523441 CLEC4DQ8WXI8 215 aa13.71□□□□□ -0.21
SDCBP-211ENST00000523441 SNX27Q96L92 541 aa13.71□□□□□ -0.21
SDCBP-211ENST00000523441 CTAGE1Q96RT6 745 aa13.71□□□□□ -0.21
SDCBP-211ENST00000523441 FSD1Q9BTV5 496 aa13.71□□□□□ -0.21
SDCBP-211ENST00000523441 CLDND1Q9NY35 253 aa13.71□□□□□ -0.21
SDCBP-211ENST00000523441 ABHD14A-ACY1A0A1B0GW23 586 aa13.7□□□□□ -0.22
SDCBP-211ENST00000523441 GH1P01241 217 aa13.7□□□□□ -0.22
SDCBP-211ENST00000523441 ZFYP08048 801 aaPredicted RBP13.7□□□□□ -0.22
SDCBP-211ENST00000523441 PSEN2P49810 448 aa13.7□□□□□ -0.22
SDCBP-211ENST00000523441 GPM6BQ13491 265 aa13.7□□□□□ -0.22
SDCBP-211ENST00000523441 TCEAL5Q5H9L2 206 aa13.7□□□□□ -0.22
SDCBP-211ENST00000523441 DHX37Q8IY37 1157 aaKnown RBP13.7□□□□□ -0.22
SDCBP-211ENST00000523441 BANK1Q8NDB2 785 aa13.7□□□□□ -0.22
SDCBP-211ENST00000523441 WNT8BQ93098 351 aa13.7□□□□□ -0.22
SDCBP-211ENST00000523441 CPVLQ9H3G5 476 aa13.7□□□□□ -0.22
SDCBP-211ENST00000523441 MYH6P13533 1939 aa13.7□□□□□ -0.22
SDCBP-211ENST00000523441 ATG2AQ2TAZ0 1938 aa13.7□□□□□ -0.22
SDCBP-211ENST00000523441 C5orf42Q9H799 3197 aa13.69□□□□□ -0.22
SDCBP-211ENST00000523441 AMHP03971 560 aa13.69□□□□□ -0.22
SDCBP-211ENST00000523441 MS4A1P11836 297 aa13.69□□□□□ -0.22
SDCBP-211ENST00000523441 CASTP20810 708 aaKnown RBP13.69□□□□□ -0.22
SDCBP-211ENST00000523441 PTPROQ16827 1216 aa13.69□□□□□ -0.22
SDCBP-211ENST00000523441 EPC2Q52LR7 807 aa13.69□□□□□ -0.22
SDCBP-211ENST00000523441 PPP4R3BQ5MIZ7 849 aa13.69□□□□□ -0.22
SDCBP-211ENST00000523441 TBC1D5Q92609 795 aa13.69□□□□□ -0.22
SDCBP-211ENST00000523441 KAT2BQ92831 832 aa13.69□□□□□ -0.22
SDCBP-211ENST00000523441 MRPL38Q96DV4 380 aaKnown RBP13.69□□□□□ -0.22
SDCBP-211ENST00000523441 YME1L1Q96TA2 773 aa13.69□□□□□ -0.22
SDCBP-211ENST00000523441 MUTYHQ9UIF7 546 aa13.69□□□□□ -0.22
SDCBP-211ENST00000523441 INSL6Q9Y581 213 aa13.69□□□□□ -0.22
SDCBP-211ENST00000523441 B4DLN1 442 aa13.68□□□□□ -0.22
SDCBP-211ENST00000523441 LGR5O75473 907 aa13.68□□□□□ -0.22
SDCBP-211ENST00000523441 CXCL10P02778 98 aa13.68□□□□□ -0.22
SDCBP-211ENST00000523441 GOLGA8HP0CJ92 632 aa13.68□□□□□ -0.22
SDCBP-211ENST00000523441 THPOP40225 353 aa13.68□□□□□ -0.22
SDCBP-211ENST00000523441 MRPL12P52815 198 aaKnown RBP13.68□□□□□ -0.22
SDCBP-211ENST00000523441 ZP2Q05996 745 aa13.68□□□□□ -0.22
SDCBP-211ENST00000523441 ARHGAP1Q07960 439 aa13.68□□□□□ -0.22
SDCBP-211ENST00000523441 MBTPS1Q14703 1052 aa13.68□□□□□ -0.22
SDCBP-211ENST00000523441 MFSD10Q14728 455 aa13.68□□□□□ -0.22
SDCBP-211ENST00000523441 KIAA0753Q2KHM9 967 aa13.68□□□□□ -0.22
SDCBP-211ENST00000523441 DBF4BQ8NFT6 615 aa13.68□□□□□ -0.22
SDCBP-211ENST00000523441 NEK9Q8TD19 979 aa13.68□□□□□ -0.22
SDCBP-211ENST00000523441 TAAR1Q96RJ0 339 aa13.68□□□□□ -0.22
SDCBP-211ENST00000523441 TMEM47Q9BQJ4 181 aa13.68□□□□□ -0.22
SDCBP-211ENST00000523441 IGFLR1Q9H665 355 aa13.68□□□□□ -0.22
SDCBP-211ENST00000523441 GTF2IRD1Q9UHL9 959 aa13.68□□□□□ -0.22
SDCBP-211ENST00000523441 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.68□□□□□ -0.22
SDCBP-211ENST00000523441 MYO7AQ13402 2215 aa13.67□□□□□ -0.22
SDCBP-211ENST00000523441 CTSHP09668 335 aa13.67□□□□□ -0.22
SDCBP-211ENST00000523441 EDNRBP24530 442 aa13.67□□□□□ -0.22
SDCBP-211ENST00000523441 IRS1P35568 1242 aa13.67□□□□□ -0.22
SDCBP-211ENST00000523441 DGKDQ16760 1214 aa13.67□□□□□ -0.22
SDCBP-211ENST00000523441 PUS10Q3MIT2 529 aaKnown RBP13.67□□□□□ -0.22
SDCBP-211ENST00000523441 TIGD5Q53EQ6 642 aa13.67□□□□□ -0.22
SDCBP-211ENST00000523441 CTNNA3Q9UI47 895 aa13.67□□□□□ -0.22
SDCBP-211ENST00000523441 FAM50BQ9Y247 325 aa13.67□□□□□ -0.22
SDCBP-211ENST00000523441 LOC102724159A0A0B4J2E5 919 aa13.66□□□□□ -0.22
SDCBP-211ENST00000523441 EFCAB14O75071 495 aa13.66□□□□□ -0.22
SDCBP-211ENST00000523441 TOP1P11387 765 aaKnown RBP13.66□□□□□ -0.22
SDCBP-211ENST00000523441 EIF2AK2P19525 551 aaKnown RBP13.66□□□□□ -0.22
SDCBP-211ENST00000523441 PTK7Q13308 1070 aa13.66□□□□□ -0.22
SDCBP-211ENST00000523441 HIC1Q14526 733 aa13.66□□□□□ -0.22
SDCBP-211ENST00000523441 PWP2Q15269 919 aaKnown RBP13.66□□□□□ -0.22
SDCBP-211ENST00000523441 VPS53Q5VIR6 699 aa13.66□□□□□ -0.22
SDCBP-211ENST00000523441 CCDC62Q6P9F0 684 aa13.66□□□□□ -0.22
SDCBP-211ENST00000523441 BTNL9Q6UXG8 535 aa13.66□□□□□ -0.22
SDCBP-211ENST00000523441 RPAINQ86UA6 219 aa13.66□□□□□ -0.22
SDCBP-211ENST00000523441 DNERQ8NFT8 737 aa13.66□□□□□ -0.22
SDCBP-211ENST00000523441 PABPC5Q96DU9 382 aaKnown RBP13.66□□□□□ -0.22
SDCBP-211ENST00000523441 ZFP91Q96JP5 570 aaPredicted RBP13.66□□□□□ -0.22
SDCBP-211ENST00000523441 UBA5Q9GZZ9 404 aa13.66□□□□□ -0.22
SDCBP-211ENST00000523441 NSUN3Q9H649 340 aaKnown RBP13.66□□□□□ -0.22
SDCBP-211ENST00000523441 MRVI1Q9Y6F6 885 aa13.66□□□□□ -0.22
SDCBP-211ENST00000523441 TRIOO75962 3097 aa13.65□□□□□ -0.22
SDCBP-211ENST00000523441 POTEB3A0JP26 581 aa13.65□□□□□ -0.22
SDCBP-211ENST00000523441 RSPH10B2B2RC85 870 aa13.65□□□□□ -0.22
SDCBP-211ENST00000523441 DHX16O60231 1041 aaKnown RBP13.65□□□□□ -0.22
SDCBP-211ENST00000523441 PARNO95453 639 aaKnown RBP13.65□□□□□ -0.22
SDCBP-211ENST00000523441 RSPH10BP0C881 870 aa13.65□□□□□ -0.22
SDCBP-211ENST00000523441 PDHBP11177 359 aa13.65□□□□□ -0.22
SDCBP-211ENST00000523441 HAND2P61296 217 aa13.65□□□□□ -0.22
SDCBP-211ENST00000523441 ZMYM1Q5SVZ6 1142 aa13.65□□□□□ -0.22
SDCBP-211ENST00000523441 TRAF7Q6Q0C0 670 aa13.65□□□□□ -0.22
SDCBP-211ENST00000523441 POTEBQ6S5H4 581 aa13.65□□□□□ -0.22
SDCBP-211ENST00000523441 SESTD1Q86VW0 696 aa13.65□□□□□ -0.22
SDCBP-211ENST00000523441 ADHFE1Q8IWW8 467 aa13.65□□□□□ -0.22
SDCBP-211ENST00000523441 TMEM192Q8IY95 271 aa13.65□□□□□ -0.22
SDCBP-211ENST00000523441 OTUD7AQ8TE49 926 aaPredicted RBP13.65□□□□□ -0.22
SDCBP-211ENST00000523441 MFSD14AQ96MC6 490 aa13.65□□□□□ -0.22
SDCBP-211ENST00000523441 ZKSCAN3Q9BRR0 538 aa13.65□□□□□ -0.22
SDCBP-211ENST00000523441 OSBPL7Q9BZF2 842 aa13.65□□□□□ -0.22
SDCBP-211ENST00000523441 FAM86C1Q9NVL1 165 aa13.65□□□□□ -0.22
SDCBP-211ENST00000523441 COL20A1Q9P218 1284 aa13.65□□□□□ -0.22
SDCBP-211ENST00000523441 RALGAPA2Q2PPJ7 1873 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms