RNA–Protein interactions for RNA: ENST00000523334.1

HDAC2-215, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 4,810 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-215ENST00000523334 GOLGA8DPQ0D2H9 430 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 CETN1Q12798 172 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 SPDYE2Q495Y8 402 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 TCP11X2Q5H9J9 407 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 PDXDC2PQ6P474 469 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 VPS36Q86VN1 386 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 EHBP1Q8NDI1 1231 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 GMCL1P1Q8NEA9 526 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 RAD54LQ92698 747 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 TEKT3Q9BXF9 490 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 THAP9Q9H5L6 903 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 RABGAP1Q9Y3P9 1069 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.32□□□□□ -1.72
HDAC2-215ENST00000523334 COL4A3BPQ9Y5P4 624 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 THSD7AQ9UPZ6 1657 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 CCDC88AQ3V6T2 1871 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 TRIM49BA6NDI0 452 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 SLC37A4O43826 429 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 SNHG28P0DPA3 235 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 ERCC3P19447 782 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 CAP2P40123 477 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 ECE1P42892 770 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 GMPSP49915 693 aaPredicted RBP4.32□□□□□ -1.72
HDAC2-215ENST00000523334 MDM2Q00987 491 aaPredicted RBP4.32□□□□□ -1.72
HDAC2-215ENST00000523334 SPP2Q13103 211 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 LRRC41Q15345 812 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 SYCP1Q15431 976 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 MIER3Q7Z3K6 550 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 SH3RF1Q7Z6J0 888 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 LDHDQ86WU2 507 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 ADSSL1Q8N142 457 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 MYCT1Q8N699 235 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 IQCDQ96DY2 449 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 C7orf25Q9BPX7 421 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 SLF1Q9BQI6 1058 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 ZNF577Q9BSK1 485 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 MRPL44Q9H9J2 332 aaKnown RBP4.32□□□□□ -1.72
HDAC2-215ENST00000523334 KBTBD4Q9NVX7 518 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 PPP2R2CQ9Y2T4 447 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 TMX2Q9Y320 296 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 CSADQ9Y600 493 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 ABCB11O95342 1321 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 PLIN4Q96Q06 1357 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 POTEB3A0JP26 581 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 POTECB2RU33 542 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 PPP1R3GB7ZBB8 358 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 MEIS1O00470 390 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 TBX3O15119 743 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 TEX33O43247 280 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 KRT86O43790 486 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 GCNT3O95395 438 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 GNA14O95837 355 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 MMP14P50281 582 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 LRRC63Q05C16 580 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 RBL2Q08999 1139 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 TEX35Q5T0J7 233 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 ARMCX5Q6P1M9 558 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 POTEBQ6S5H4 581 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 SULF1Q8IWU6 871 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 GUF1Q8N442 669 aaKnown RBP4.32□□□□□ -1.72
HDAC2-215ENST00000523334 LPAR1Q92633 364 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 CEP89Q96ST8 783 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 DESI2Q9BSY9 194 aa4.32□□□□□ -1.72
HDAC2-215ENST00000523334 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.32□□□□□ -1.72
HDAC2-215ENST00000523334 CICQ96RK0 1608 aaPredicted RBP4.31□□□□□ -1.72
HDAC2-215ENST00000523334 IGKV6D-41A0A0C4DH26 115 aa4.31□□□□□ -1.72
HDAC2-215ENST00000523334 A0A0U1RQG5 324 aaPredicted RBP4.31□□□□□ -1.72
HDAC2-215ENST00000523334 A0A1B0GTH6 734 aa4.31□□□□□ -1.72
HDAC2-215ENST00000523334 YDJCA8MPS7 323 aa4.31□□□□□ -1.72
HDAC2-215ENST00000523334 B4DLN1 442 aa4.31□□□□□ -1.72
HDAC2-215ENST00000523334 E9PMD0 336 aa4.31□□□□□ -1.72
HDAC2-215ENST00000523334 RRP9O43818 475 aaKnown RBP4.31□□□□□ -1.72
HDAC2-215ENST00000523334 CALUO43852 315 aaPredicted RBP4.31□□□□□ -1.72
HDAC2-215ENST00000523334 EPB41P11171 864 aaKnown RBP4.31□□□□□ -1.72
HDAC2-215ENST00000523334 KRT13P13646 458 aa4.31□□□□□ -1.72
HDAC2-215ENST00000523334 SP4Q02446 784 aa4.31□□□□□ -1.72
HDAC2-215ENST00000523334 KIF5AQ12840 1032 aa4.31□□□□□ -1.72
HDAC2-215ENST00000523334 E2F4Q16254 413 aa4.31□□□□□ -1.72
HDAC2-215ENST00000523334 LAMA4Q16363 1823 aa4.31□□□□□ -1.72
HDAC2-215ENST00000523334 NBPF9Q3BBW0 867 aa4.31□□□□□ -1.72
HDAC2-215ENST00000523334 ZNF569Q5MCW4 686 aa4.31□□□□□ -1.72
HDAC2-215ENST00000523334 TATDN1Q6P1N9 297 aa4.31□□□□□ -1.72
HDAC2-215ENST00000523334 NLRX1Q86UT6 975 aa4.31□□□□□ -1.72
HDAC2-215ENST00000523334 GIMAP8Q8ND71 665 aaPredicted RBP4.31□□□□□ -1.72
HDAC2-215ENST00000523334 WRNIP1Q96S55 665 aa4.31□□□□□ -1.72
HDAC2-215ENST00000523334 BHMT2Q9H2M3 363 aa4.31□□□□□ -1.72
HDAC2-215ENST00000523334 FAM207AQ9NSI2 230 aaPredicted RBP4.31□□□□□ -1.72
HDAC2-215ENST00000523334 COL5A3P25940 1745 aaPredicted RBP4.31□□□□□ -1.72
HDAC2-215ENST00000523334 SNED1Q8TER0 1413 aa4.31□□□□□ -1.72
HDAC2-215ENST00000523334 TESPA1A2RU30 521 aaPredicted RBP4.31□□□□□ -1.72
HDAC2-215ENST00000523334 LGALS16A8MUM7 142 aa4.31□□□□□ -1.72
HDAC2-215ENST00000523334 WNT10BO00744 389 aa4.31□□□□□ -1.72
HDAC2-215ENST00000523334 BACH1O14867 736 aa4.31□□□□□ -1.72
HDAC2-215ENST00000523334 WDR46O15213 610 aaKnown RBP4.31□□□□□ -1.72
HDAC2-215ENST00000523334 DKC1O60832 514 aaKnown RBP eCLIP4.31□□□□□ -1.72
HDAC2-215ENST00000523334 CD44P16070 742 aaKnown RBP4.31□□□□□ -1.72
HDAC2-215ENST00000523334 BMP6P22004 513 aa4.31□□□□□ -1.72
HDAC2-215ENST00000523334 CCZ1BP86790 482 aa4.31□□□□□ -1.72
HDAC2-215ENST00000523334 CCZ1P86791 482 aaPredicted RBP4.31□□□□□ -1.72
HDAC2-215ENST00000523334 CACNB1Q02641 598 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms