RNA–Protein interactions for RNA: ENST00000522642.1

GINS4-208, Transcript of GINS complex subunit 4, humanhuman

TSL 5

Gene GINS4, Length 390 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS4-208ENST00000522642 PDE4BQ07343 736 aa8.55□□□□□ -1.04
GINS4-208ENST00000522642 G3BP1Q13283 466 aaKnown RBP eCLIP8.55□□□□□ -1.04
GINS4-208ENST00000522642 GDF6Q6KF10 455 aaPredicted RBP8.55□□□□□ -1.04
GINS4-208ENST00000522642 LRRC47Q8N1G4 583 aaKnown RBP8.55□□□□□ -1.04
GINS4-208ENST00000522642 PLCD3Q8N3E9 789 aa8.55□□□□□ -1.04
GINS4-208ENST00000522642 MICAL1Q8TDZ2 1067 aa8.55□□□□□ -1.04
GINS4-208ENST00000522642 DDRGK1Q96HY6 314 aa8.55□□□□□ -1.04
GINS4-208ENST00000522642 NECTIN4Q96NY8 510 aa8.55□□□□□ -1.04
GINS4-208ENST00000522642 KATNAL1Q9BW62 490 aa8.55□□□□□ -1.04
GINS4-208ENST00000522642 TLE6Q9H808 572 aa8.55□□□□□ -1.04
GINS4-208ENST00000522642 A1CFQ9NQ94 594 aaKnown RBP8.55□□□□□ -1.04
GINS4-208ENST00000522642 RNF216Q9NWF9 866 aaPredicted RBP8.55□□□□□ -1.04
GINS4-208ENST00000522642 ANGPTL2Q9UKU9 493 aa8.55□□□□□ -1.04
GINS4-208ENST00000522642 PLAGL2Q9UPG8 496 aa8.55□□□□□ -1.04
GINS4-208ENST00000522642 SPTBN2O15020 2390 aa8.55□□□□□ -1.04
GINS4-208ENST00000522642 C5orf42Q9H799 3197 aa8.55□□□□□ -1.04
GINS4-208ENST00000522642 MCM3APO60318 1980 aa8.54□□□□□ -1.04
GINS4-208ENST00000522642 DCDC2BA2VCK2 349 aa8.54□□□□□ -1.04
GINS4-208ENST00000522642 F5H6K3 240 aa8.54□□□□□ -1.04
GINS4-208ENST00000522642 CSPG5O95196 566 aa8.54□□□□□ -1.04
GINS4-208ENST00000522642 CASTP20810 708 aaKnown RBP8.54□□□□□ -1.04
GINS4-208ENST00000522642 KLRC3Q07444 240 aa8.54□□□□□ -1.04
GINS4-208ENST00000522642 SLFN5Q08AF3 891 aa8.54□□□□□ -1.04
GINS4-208ENST00000522642 PLEKHG4Q58EX7 1191 aa8.54□□□□□ -1.04
GINS4-208ENST00000522642 ZNF618Q5T7W0 954 aa8.54□□□□□ -1.04
GINS4-208ENST00000522642 CES5AQ6NT32 575 aa8.54□□□□□ -1.04
GINS4-208ENST00000522642 RBM23Q86U06 439 aaKnown RBP8.54□□□□□ -1.04
GINS4-208ENST00000522642 DCLK2Q8N568 766 aa8.54□□□□□ -1.04
GINS4-208ENST00000522642 MORC4Q8TE76 937 aa8.54□□□□□ -1.04
GINS4-208ENST00000522642 SCFD2Q8WU76 684 aa8.54□□□□□ -1.04
GINS4-208ENST00000522642 DDX1Q92499 740 aaKnown RBP8.54□□□□□ -1.04
GINS4-208ENST00000522642 APBB2Q92870 758 aa8.54□□□□□ -1.04
GINS4-208ENST00000522642 ZNF512BQ96KM6 892 aaPredicted RBP8.54□□□□□ -1.04
GINS4-208ENST00000522642 TSHZ2Q9NRE2 1034 aa8.54□□□□□ -1.04
GINS4-208ENST00000522642 RNF146Q9NTX7 359 aa8.54□□□□□ -1.04
GINS4-208ENST00000522642 GTF2IRD1Q9UHL9 959 aa8.54□□□□□ -1.04
GINS4-208ENST00000522642 FBXL21Q9UKT6 434 aa8.54□□□□□ -1.04
GINS4-208ENST00000522642 R4GN57 208 aa8.54□□□□□ -1.04
GINS4-208ENST00000522642 PTPRSQ13332 1948 aa8.54□□□□□ -1.04
GINS4-208ENST00000522642 RBM47A0AV96 593 aaKnown RBP8.53□□□□□ -1.04
GINS4-208ENST00000522642 HOXB8P17481 243 aaPredicted RBP8.53□□□□□ -1.04
GINS4-208ENST00000522642 PTGS1P23219 599 aa8.53□□□□□ -1.04
GINS4-208ENST00000522642 ZAP70P43403 619 aa8.53□□□□□ -1.04
GINS4-208ENST00000522642 BTG3Q14201 252 aaPredicted RBP8.53□□□□□ -1.04
GINS4-208ENST00000522642 TCTN1Q2MV58 587 aa8.53□□□□□ -1.04
GINS4-208ENST00000522642 VARS2Q5ST30 1063 aaKnown RBP8.53□□□□□ -1.04
GINS4-208ENST00000522642 RUFY4Q6ZNE9 571 aa8.53□□□□□ -1.04
GINS4-208ENST00000522642 CLEC10AQ8IUN9 316 aa8.53□□□□□ -1.04
GINS4-208ENST00000522642 RPAP2Q8IXW5 612 aaPredicted RBP8.53□□□□□ -1.04
GINS4-208ENST00000522642 DHX38Q92620 1227 aaKnown RBP8.53□□□□□ -1.04
GINS4-208ENST00000522642 CLP1Q92989 425 aaKnown RBP8.53□□□□□ -1.04
GINS4-208ENST00000522642 YTHDC1Q96MU7 727 aaKnown RBP8.53□□□□□ -1.04
GINS4-208ENST00000522642 TRERF1Q96PN7 1200 aa8.53□□□□□ -1.04
GINS4-208ENST00000522642 GPR108Q9NPR9 543 aa8.53□□□□□ -1.04
GINS4-208ENST00000522642 TRIP12Q14669 1992 aaPredicted RBP8.53□□□□□ -1.04
GINS4-208ENST00000522642 SCN10AQ9Y5Y9 1956 aa8.53□□□□□ -1.04
GINS4-208ENST00000522642 ADGRA3Q8IWK6 1321 aa8.53□□□□□ -1.04
GINS4-208ENST00000522642 ANKRD11Q6UB99 2663 aaPredicted RBP8.52□□□□□ -1.05
GINS4-208ENST00000522642 SRGAP3O43295 1099 aa8.52□□□□□ -1.05
GINS4-208ENST00000522642 TXNP10599 105 aaKnown RBP8.52□□□□□ -1.05
GINS4-208ENST00000522642 HOXB3P14651 431 aaPredicted RBP8.52□□□□□ -1.05
GINS4-208ENST00000522642 CDK8P49336 464 aa8.52□□□□□ -1.05
GINS4-208ENST00000522642 TPRNQ4KMQ1 711 aa8.52□□□□□ -1.05
GINS4-208ENST00000522642 PPM1JQ5JR12 505 aa8.52□□□□□ -1.05
GINS4-208ENST00000522642 PDE12Q6L8Q7 609 aaKnown RBP8.52□□□□□ -1.05
GINS4-208ENST00000522642 DHX37Q8IY37 1157 aaKnown RBP8.52□□□□□ -1.05
GINS4-208ENST00000522642 PPP1R13LQ8WUF5 828 aa8.52□□□□□ -1.05
GINS4-208ENST00000522642 CHURC1Q8WUH1 139 aa8.52□□□□□ -1.05
GINS4-208ENST00000522642 NUP88Q99567 741 aaPredicted RBP8.52□□□□□ -1.05
GINS4-208ENST00000522642 PIH1D3Q9NQM4 214 aaKnown RBP8.52□□□□□ -1.05
GINS4-208ENST00000522642 NYAP2Q9P242 653 aa8.52□□□□□ -1.05
GINS4-208ENST00000522642 ISY1Q9ULR0 285 aaKnown RBP8.52□□□□□ -1.05
GINS4-208ENST00000522642 MICAL3Q7RTP6 2002 aa8.52□□□□□ -1.05
GINS4-208ENST00000522642 ZBED9Q6R2W3 1325 aa8.52□□□□□ -1.05
GINS4-208ENST00000522642 RALGAPA2Q2PPJ7 1873 aa8.51□□□□□ -1.05
GINS4-208ENST00000522642 CAND2O75155 1236 aa8.51□□□□□ -1.05
GINS4-208ENST00000522642 ALAS1P13196 640 aa8.51□□□□□ -1.05
GINS4-208ENST00000522642 SP100P23497 879 aaPredicted RBP8.51□□□□□ -1.05
GINS4-208ENST00000522642 THPOP40225 353 aa8.51□□□□□ -1.05
GINS4-208ENST00000522642 ZNF200P98182 395 aaPredicted RBP8.51□□□□□ -1.05
GINS4-208ENST00000522642 PDE4DQ08499 809 aa8.51□□□□□ -1.05
GINS4-208ENST00000522642 TBC1D8BQ0IIM8 1120 aa8.51□□□□□ -1.05
GINS4-208ENST00000522642 IKQ13123 557 aaPredicted RBP8.51□□□□□ -1.05
GINS4-208ENST00000522642 DGKDQ16760 1214 aa8.51□□□□□ -1.05
GINS4-208ENST00000522642 TMEM63BQ5T3F8 832 aa8.51□□□□□ -1.05
GINS4-208ENST00000522642 CWF19L1Q69YN2 538 aaKnown RBP8.51□□□□□ -1.05
GINS4-208ENST00000522642 NSMFQ6X4W1 530 aa8.51□□□□□ -1.05
GINS4-208ENST00000522642 FAM160B2Q86V87 743 aa8.51□□□□□ -1.05
GINS4-208ENST00000522642 TDRD5Q8NAT2 981 aaKnown RBP8.51□□□□□ -1.05
GINS4-208ENST00000522642 SPPL3Q8TCT6 385 aa8.51□□□□□ -1.05
GINS4-208ENST00000522642 ATP8B4Q8TF62 1192 aa8.51□□□□□ -1.05
GINS4-208ENST00000522642 POF1BQ8WVV4 589 aa8.51□□□□□ -1.05
GINS4-208ENST00000522642 CYP39A1Q9NYL5 469 aa8.51□□□□□ -1.05
GINS4-208ENST00000522642 HDAC6Q9UBN7 1215 aa8.51□□□□□ -1.05
GINS4-208ENST00000522642 USP18Q9UMW8 372 aa8.51□□□□□ -1.05
GINS4-208ENST00000522642 PARP14Q460N5 1801 aa8.51□□□□□ -1.05
GINS4-208ENST00000522642 DCHS1Q96JQ0 3298 aa8.51□□□□□ -1.05
GINS4-208ENST00000522642 ZNF292O60281 2723 aa8.5□□□□□ -1.05
GINS4-208ENST00000522642 SPTLC1O15269 473 aa8.5□□□□□ -1.05
GINS4-208ENST00000522642 PI15O43692 258 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms