RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 MOXD2PA6NHM9 499 aa20.56■□□□□ 0.88
CLK4-211ENST00000522556 PIK3CDO00329 1044 aa20.56■□□□□ 0.88
CLK4-211ENST00000522556 NAPAP54920 295 aa20.56■□□□□ 0.88
CLK4-211ENST00000522556 PSMC6P62333 389 aa20.56■□□□□ 0.88
CLK4-211ENST00000522556 TLE2Q04725 743 aa20.56■□□□□ 0.88
CLK4-211ENST00000522556 ARHGAP1Q07960 439 aa20.56■□□□□ 0.88
CLK4-211ENST00000522556 VSIG10LQ86VR7 867 aa20.56■□□□□ 0.88
CLK4-211ENST00000522556 SAMD3Q8N6K7 520 aa20.56■□□□□ 0.88
CLK4-211ENST00000522556 IL17RAQ96F46 866 aa20.56■□□□□ 0.88
CLK4-211ENST00000522556 PSTPIP2Q9H939 334 aa20.56■□□□□ 0.88
CLK4-211ENST00000522556 GRIN2DO15399 1336 aa20.55■□□□□ 0.88
CLK4-211ENST00000522556 B4DLN1 442 aa20.55■□□□□ 0.88
CLK4-211ENST00000522556 PQBP1O60828 265 aaKnown RBP20.55■□□□□ 0.88
CLK4-211ENST00000522556 EIF3JO75822 258 aaKnown RBP20.55■□□□□ 0.88
CLK4-211ENST00000522556 MRPL12P52815 198 aaKnown RBP20.55■□□□□ 0.88
CLK4-211ENST00000522556 ANAPC15P60006 121 aa20.55■□□□□ 0.88
CLK4-211ENST00000522556 TTLL4Q14679 1199 aa20.55■□□□□ 0.88
CLK4-211ENST00000522556 PCSK9Q8NBP7 692 aaKnown RBP20.55■□□□□ 0.88
CLK4-211ENST00000522556 BCAS3Q9H6U6 928 aa20.55■□□□□ 0.88
CLK4-211ENST00000522556 PDLIM7Q9NR12 457 aa20.55■□□□□ 0.88
CLK4-211ENST00000522556 TMEM260Q9NX78 707 aa20.55■□□□□ 0.88
CLK4-211ENST00000522556 RTEL1Q9NZ71 1219 aa20.55■□□□□ 0.88
CLK4-211ENST00000522556 DDX41Q9UJV9 622 aaKnown RBP20.55■□□□□ 0.88
CLK4-211ENST00000522556 TPCN1Q9ULQ1 816 aa20.55■□□□□ 0.88
CLK4-211ENST00000522556 Q9Y3F1 56 aa20.55■□□□□ 0.88
CLK4-211ENST00000522556 LARGE1O95461 756 aa20.54■□□□□ 0.88
CLK4-211ENST00000522556 SCG2P13521 617 aa20.54■□□□□ 0.88
CLK4-211ENST00000522556 CCND2P30279 289 aa20.54■□□□□ 0.88
CLK4-211ENST00000522556 AK2P54819 239 aa20.54■□□□□ 0.88
CLK4-211ENST00000522556 SP2Q02086 613 aa20.54■□□□□ 0.88
CLK4-211ENST00000522556 SEMA3FQ13275 785 aa20.54■□□□□ 0.88
CLK4-211ENST00000522556 PFKFB3Q16875 520 aaPredicted RBP20.54■□□□□ 0.88
CLK4-211ENST00000522556 CUL5Q93034 780 aa20.54■□□□□ 0.88
CLK4-211ENST00000522556 GLT1D1Q96MS3 346 aa20.54■□□□□ 0.88
CLK4-211ENST00000522556 SLC26A6Q9BXS9 759 aa20.54■□□□□ 0.88
CLK4-211ENST00000522556 PRO3102Q9H379 93 aa20.54■□□□□ 0.88
CLK4-211ENST00000522556 BARHL2Q9NY43 387 aa20.54■□□□□ 0.88
CLK4-211ENST00000522556 MRVI1Q9Y6F6 885 aa20.54■□□□□ 0.88
CLK4-211ENST00000522556 SCN10AQ9Y5Y9 1956 aa20.54■□□□□ 0.88
CLK4-211ENST00000522556 TRIM43BA6NCK2 446 aa20.53■□□□□ 0.88
CLK4-211ENST00000522556 ITGB8P26012 769 aa20.53■□□□□ 0.88
CLK4-211ENST00000522556 MAGEA10P43363 369 aaPredicted RBP20.53■□□□□ 0.88
CLK4-211ENST00000522556 C1orf53Q5VUE5 145 aa20.53■□□□□ 0.88
CLK4-211ENST00000522556 AFG1LQ8WV93 481 aa20.53■□□□□ 0.88
CLK4-211ENST00000522556 VTI1AQ96AJ9 217 aa20.53■□□□□ 0.88
CLK4-211ENST00000522556 TRIM43Q96BQ3 446 aaPredicted RBP20.53■□□□□ 0.88
CLK4-211ENST00000522556 PRDM5Q9NQX1 630 aaPredicted RBP20.53■□□□□ 0.88
CLK4-211ENST00000522556 RBM27Q9P2N5 1060 aaKnown RBP20.53■□□□□ 0.88
CLK4-211ENST00000522556 TELO2Q9Y4R8 837 aa20.53■□□□□ 0.88
CLK4-211ENST00000522556 CCDC196A0A1B0GTZ2 297 aa20.52■□□□□ 0.88
CLK4-211ENST00000522556 PRPF3O43395 683 aaKnown RBP20.52■□□□□ 0.88
CLK4-211ENST00000522556 MYL3P08590 195 aa20.52■□□□□ 0.88
CLK4-211ENST00000522556 IFNAR1P17181 557 aa20.52■□□□□ 0.88
CLK4-211ENST00000522556 UBA1P22314 1058 aaKnown RBP20.52■□□□□ 0.88
CLK4-211ENST00000522556 PURAQ00577 322 aaKnown RBP20.52■□□□□ 0.88
CLK4-211ENST00000522556 MDM2Q00987 491 aaPredicted RBP20.52■□□□□ 0.88
CLK4-211ENST00000522556 SCRN1Q12765 414 aa20.52■□□□□ 0.88
CLK4-211ENST00000522556 ZNF274Q96GC6 653 aaPredicted RBP20.52■□□□□ 0.88
CLK4-211ENST00000522556 AIFM3Q96NN9 605 aa20.52■□□□□ 0.88
CLK4-211ENST00000522556 RIC8AQ9NPQ8 531 aa20.52■□□□□ 0.88
CLK4-211ENST00000522556 PCDHA6Q9UN73 950 aa20.52■□□□□ 0.88
CLK4-211ENST00000522556 PCDHA8Q9Y5H6 950 aa20.52■□□□□ 0.88
CLK4-211ENST00000522556 ELP1O95163 1332 aa20.52■□□□□ 0.87
CLK4-211ENST00000522556 SMCO2A6NFE2 343 aa20.51■□□□□ 0.87
CLK4-211ENST00000522556 NKRFO15226 690 aaKnown RBP eCLIP20.51■□□□□ 0.87
CLK4-211ENST00000522556 GH1P01241 217 aa20.51■□□□□ 0.87
CLK4-211ENST00000522556 MMP3P08254 477 aa20.51■□□□□ 0.87
CLK4-211ENST00000522556 CDK7P50613 346 aa20.51■□□□□ 0.87
CLK4-211ENST00000522556 ADCY7P51828 1080 aa20.51■□□□□ 0.87
CLK4-211ENST00000522556 PPP1R18Q6NYC8 613 aa20.51■□□□□ 0.87
CLK4-211ENST00000522556 INPP4AQ96PE3 977 aaPredicted RBP20.51■□□□□ 0.87
CLK4-211ENST00000522556 KIF2CQ99661 725 aa20.51■□□□□ 0.87
CLK4-211ENST00000522556 GDF15Q99988 308 aa20.51■□□□□ 0.87
CLK4-211ENST00000522556 A0A0U1RQG5 324 aaPredicted RBP20.5■□□□□ 0.87
CLK4-211ENST00000522556 A6NJR5 290 aa20.5■□□□□ 0.87
CLK4-211ENST00000522556 RBAK-RBAKDNI3L0D1 243 aa20.5■□□□□ 0.87
CLK4-211ENST00000522556 ARVCFO00192 962 aa20.5■□□□□ 0.87
CLK4-211ENST00000522556 CPT1AP50416 773 aa20.5■□□□□ 0.87
CLK4-211ENST00000522556 FAAP100Q0VG06 881 aa20.5■□□□□ 0.87
CLK4-211ENST00000522556 PCNX4Q63HM2 1172 aa20.5■□□□□ 0.87
CLK4-211ENST00000522556 RNF26Q9BY78 433 aaPredicted RBP20.5■□□□□ 0.87
CLK4-211ENST00000522556 VPS54Q9P1Q0 977 aa20.5■□□□□ 0.87
CLK4-211ENST00000522556 GGPS1O95749 300 aa20.49■□□□□ 0.87
CLK4-211ENST00000522556 CLTBP09497 229 aa20.49■□□□□ 0.87
CLK4-211ENST00000522556 CLK2P49760 499 aaKnown RBP20.49■□□□□ 0.87
CLK4-211ENST00000522556 ITGA7Q13683 1181 aa20.49■□□□□ 0.87
CLK4-211ENST00000522556 ANKRD33Q7Z3H0 272 aa20.49■□□□□ 0.87
CLK4-211ENST00000522556 FAM126BQ8IXS8 530 aa20.49■□□□□ 0.87
CLK4-211ENST00000522556 NECAB1Q8N987 351 aa20.49■□□□□ 0.87
CLK4-211ENST00000522556 SLC43A3Q8NBI5 491 aa20.49■□□□□ 0.87
CLK4-211ENST00000522556 RASGRP4Q8TDF6 673 aa20.49■□□□□ 0.87
CLK4-211ENST00000522556 ANO3Q9BYT9 981 aa20.49■□□□□ 0.87
CLK4-211ENST00000522556 ALDH8A1Q9H2A2 487 aaPredicted RBP20.49■□□□□ 0.87
CLK4-211ENST00000522556 SPDYE3A6NKU9 549 aa20.48■□□□□ 0.87
CLK4-211ENST00000522556 hCG_1984214I3L0E3 225 aa20.48■□□□□ 0.87
CLK4-211ENST00000522556 ITGB5P18084 799 aa20.48■□□□□ 0.87
CLK4-211ENST00000522556 NEK4P51957 841 aa20.48■□□□□ 0.87
CLK4-211ENST00000522556 ST3GAL1Q11201 340 aa20.48■□□□□ 0.87
CLK4-211ENST00000522556 HSDL1Q3SXM5 330 aa20.48■□□□□ 0.87
CLK4-211ENST00000522556 JAKMIP3Q5VZ66 844 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms