RNA–Protein interactions for RNA: ENST00000522416.1

AP003550.1-201, humanhuman

TSL 3 BASIC

Gene AP003550.1, Length 414 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003550.1-201ENST00000522416 UPF3BQ9BZI7 483 aaKnown RBP12.16□□□□□ -0.46
AP003550.1-201ENST00000522416 TRPV6Q9H1D0 765 aa12.16□□□□□ -0.46
AP003550.1-201ENST00000522416 BCAS3Q9H6U6 928 aa12.16□□□□□ -0.46
AP003550.1-201ENST00000522416 FAM217BQ9NTX9 383 aaPredicted RBP12.16□□□□□ -0.46
AP003550.1-201ENST00000522416 RTEL1Q9NZ71 1219 aa12.16□□□□□ -0.46
AP003550.1-201ENST00000522416 ELP1O95163 1332 aa12.15□□□□□ -0.46
AP003550.1-201ENST00000522416 DCDC2CA8MYV0 355 aa12.15□□□□□ -0.46
AP003550.1-201ENST00000522416 ZEB2O60315 1214 aa12.15□□□□□ -0.46
AP003550.1-201ENST00000522416 DTNBO60941 627 aa12.15□□□□□ -0.46
AP003550.1-201ENST00000522416 EIF3JO75822 258 aaKnown RBP12.15□□□□□ -0.46
AP003550.1-201ENST00000522416 RGS20O76081 388 aa12.15□□□□□ -0.46
AP003550.1-201ENST00000522416 HMGB1P09429 215 aaKnown RBP12.15□□□□□ -0.46
AP003550.1-201ENST00000522416 CCND2P30279 289 aa12.15□□□□□ -0.46
AP003550.1-201ENST00000522416 METAP2P50579 478 aaKnown RBP eCLIP12.15□□□□□ -0.46
AP003550.1-201ENST00000522416 CDK7P50613 346 aa12.15□□□□□ -0.46
AP003550.1-201ENST00000522416 NKX3-2P78367 333 aa12.15□□□□□ -0.46
AP003550.1-201ENST00000522416 GHRHRQ02643 423 aa12.15□□□□□ -0.46
AP003550.1-201ENST00000522416 ARHGAP1Q07960 439 aa12.15□□□□□ -0.46
AP003550.1-201ENST00000522416 ITGA7Q13683 1181 aa12.15□□□□□ -0.46
AP003550.1-201ENST00000522416 C1orf53Q5VUE5 145 aa12.15□□□□□ -0.46
AP003550.1-201ENST00000522416 WWC2Q6AWC2 1192 aa12.15□□□□□ -0.46
AP003550.1-201ENST00000522416 LRCH3Q96II8 777 aa12.15□□□□□ -0.46
AP003550.1-201ENST00000522416 PPP1R12CQ9BZL4 782 aa12.15□□□□□ -0.46
AP003550.1-201ENST00000522416 NCOA5Q9HCD5 579 aaKnown RBP12.15□□□□□ -0.46
AP003550.1-201ENST00000522416 Q9Y3F1 56 aa12.15□□□□□ -0.46
AP003550.1-201ENST00000522416 MRVI1Q9Y6F6 885 aa12.15□□□□□ -0.46
AP003550.1-201ENST00000522416 V9GY48 417 aaPredicted RBP12.15□□□□□ -0.46
AP003550.1-201ENST00000522416 MEIS2O14770 477 aa12.14□□□□□ -0.47
AP003550.1-201ENST00000522416 GH1P01241 217 aa12.14□□□□□ -0.47
AP003550.1-201ENST00000522416 RAG1P15918 1043 aa12.14□□□□□ -0.47
AP003550.1-201ENST00000522416 SMARCA1P28370 1054 aa12.14□□□□□ -0.47
AP003550.1-201ENST00000522416 BMP8BP34820 402 aa12.14□□□□□ -0.47
AP003550.1-201ENST00000522416 CPT1AP50416 773 aa12.14□□□□□ -0.47
AP003550.1-201ENST00000522416 EPHB4P54760 987 aa12.14□□□□□ -0.47
AP003550.1-201ENST00000522416 CCT2P78371 535 aaKnown RBP12.14□□□□□ -0.47
AP003550.1-201ENST00000522416 MRPS9P82933 396 aaKnown RBP12.14□□□□□ -0.47
AP003550.1-201ENST00000522416 PURAQ00577 322 aaKnown RBP12.14□□□□□ -0.47
AP003550.1-201ENST00000522416 SP2Q02086 613 aa12.14□□□□□ -0.47
AP003550.1-201ENST00000522416 FUT2Q10981 343 aa12.14□□□□□ -0.47
AP003550.1-201ENST00000522416 TRAF1Q13077 416 aa12.14□□□□□ -0.47
AP003550.1-201ENST00000522416 FAM47CQ5HY64 1035 aa12.14□□□□□ -0.47
AP003550.1-201ENST00000522416 TYW1BQ6NUM6 668 aa12.14□□□□□ -0.47
AP003550.1-201ENST00000522416 ANKRD33Q7Z3H0 272 aa12.14□□□□□ -0.47
AP003550.1-201ENST00000522416 VSIG10LQ86VR7 867 aa12.14□□□□□ -0.47
AP003550.1-201ENST00000522416 FAM126BQ8IXS8 530 aa12.14□□□□□ -0.47
AP003550.1-201ENST00000522416 CUL5Q93034 780 aa12.14□□□□□ -0.47
AP003550.1-201ENST00000522416 PGBD1Q96JS3 809 aa12.14□□□□□ -0.47
AP003550.1-201ENST00000522416 PSTPIP2Q9H939 334 aa12.14□□□□□ -0.47
AP003550.1-201ENST00000522416 RBM28Q9NW13 759 aaKnown RBP12.14□□□□□ -0.47
AP003550.1-201ENST00000522416 DDX41Q9UJV9 622 aaKnown RBP12.14□□□□□ -0.47
AP003550.1-201ENST00000522416 UMODL1Q5DID0 1318 aa12.13□□□□□ -0.47
AP003550.1-201ENST00000522416 KIAA0355O15063 1070 aa12.13□□□□□ -0.47
AP003550.1-201ENST00000522416 ADAMTS3O15072 1205 aa12.13□□□□□ -0.47
AP003550.1-201ENST00000522416 NKRFO15226 690 aaKnown RBP eCLIP12.13□□□□□ -0.47
AP003550.1-201ENST00000522416 B4GALT4O60513 344 aa12.13□□□□□ -0.47
AP003550.1-201ENST00000522416 SEC24BO95487 1268 aa12.13□□□□□ -0.47
AP003550.1-201ENST00000522416 MMP3P08254 477 aa12.13□□□□□ -0.47
AP003550.1-201ENST00000522416 ZNF286BP0CG31 522 aa12.13□□□□□ -0.47
AP003550.1-201ENST00000522416 PSMA5P28066 241 aa12.13□□□□□ -0.47
AP003550.1-201ENST00000522416 CYP2C18P33260 490 aa12.13□□□□□ -0.47
AP003550.1-201ENST00000522416 NAPAP54920 295 aa12.13□□□□□ -0.47
AP003550.1-201ENST00000522416 TOB2Q14106 344 aaPredicted RBP12.13□□□□□ -0.47
AP003550.1-201ENST00000522416 NBPF20Q3BBV1 942 aa12.13□□□□□ -0.47
AP003550.1-201ENST00000522416 C9orf50Q5SZB4 431 aa12.13□□□□□ -0.47
AP003550.1-201ENST00000522416 RUFY3Q7L099 469 aa12.13□□□□□ -0.47
AP003550.1-201ENST00000522416 TDHQ8IZJ6 230 aa12.13□□□□□ -0.47
AP003550.1-201ENST00000522416 PHKBQ93100 1093 aa12.13□□□□□ -0.47
AP003550.1-201ENST00000522416 MTG1Q9BT17 334 aaPredicted RBP12.13□□□□□ -0.47
AP003550.1-201ENST00000522416 TRMT13Q9NUP7 481 aaKnown RBP12.13□□□□□ -0.47
AP003550.1-201ENST00000522416 POLR3EQ9NVU0 708 aa12.13□□□□□ -0.47
AP003550.1-201ENST00000522416 TMEM260Q9NX78 707 aa12.13□□□□□ -0.47
AP003550.1-201ENST00000522416 TELO2Q9Y4R8 837 aa12.13□□□□□ -0.47
AP003550.1-201ENST00000522416 KAT6AQ92794 2004 aa12.12□□□□□ -0.47
AP003550.1-201ENST00000522416 A6NJR5 290 aa12.12□□□□□ -0.47
AP003550.1-201ENST00000522416 STXBP3O00186 592 aa12.12□□□□□ -0.47
AP003550.1-201ENST00000522416 TLR3O15455 904 aaKnown RBP12.12□□□□□ -0.47
AP003550.1-201ENST00000522416 GGPS1O95749 300 aa12.12□□□□□ -0.47
AP003550.1-201ENST00000522416 CYP2C9P11712 490 aa12.12□□□□□ -0.47
AP003550.1-201ENST00000522416 UBA1P22314 1058 aaKnown RBP12.12□□□□□ -0.47
AP003550.1-201ENST00000522416 SP4Q02446 784 aa12.12□□□□□ -0.47
AP003550.1-201ENST00000522416 STK3Q13188 491 aa12.12□□□□□ -0.47
AP003550.1-201ENST00000522416 SEMA3FQ13275 785 aa12.12□□□□□ -0.47
AP003550.1-201ENST00000522416 SHHQ15465 462 aa12.12□□□□□ -0.47
AP003550.1-201ENST00000522416 DHX37Q8IY37 1157 aaKnown RBP12.12□□□□□ -0.47
AP003550.1-201ENST00000522416 TOX2Q96NM4 488 aa12.12□□□□□ -0.47
AP003550.1-201ENST00000522416 MAF1Q9H063 256 aa12.12□□□□□ -0.47
AP003550.1-201ENST00000522416 ZSWIM6Q9HCJ5 1215 aa12.12□□□□□ -0.47
AP003550.1-201ENST00000522416 MAP3K20Q9NYL2 800 aaKnown RBP12.12□□□□□ -0.47
AP003550.1-201ENST00000522416 PKD2L1Q9P0L9 805 aa12.12□□□□□ -0.47
AP003550.1-201ENST00000522416 TBX21Q9UL17 535 aa12.12□□□□□ -0.47
AP003550.1-201ENST00000522416 CYP46A1Q9Y6A2 500 aa12.12□□□□□ -0.47
AP003550.1-201ENST00000522416 GBF1Q92538 1859 aa12.12□□□□□ -0.47
AP003550.1-201ENST00000522416 FRMPD4Q14CM0 1322 aa12.11□□□□□ -0.47
AP003550.1-201ENST00000522416 MROH7Q68CQ1 1323 aa12.11□□□□□ -0.47
AP003550.1-201ENST00000522416 CABYRO75952 493 aa12.11□□□□□ -0.47
AP003550.1-201ENST00000522416 SLC34A2O95436 690 aa12.11□□□□□ -0.47
AP003550.1-201ENST00000522416 CD4P01730 458 aa12.11□□□□□ -0.47
AP003550.1-201ENST00000522416 ACRP10323 421 aa12.11□□□□□ -0.47
AP003550.1-201ENST00000522416 PDIA3P30101 505 aaKnown RBP12.11□□□□□ -0.47
AP003550.1-201ENST00000522416 CCL23P55773 120 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms