RNA–Protein interactions for RNA: ENST00000521990.1

TSPAN18-210, Transcript of tetraspanin 18, humanhuman

TSL 2

Gene TSPAN18, Length 700 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN18-210ENST00000521990 TBX21Q9UL17 535 aa16.54■□□□□ 0.24
TSPAN18-210ENST00000521990 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.54■□□□□ 0.24
TSPAN18-210ENST00000521990 LAMA2P24043 3122 aaKnown RBP16.54■□□□□ 0.24
TSPAN18-210ENST00000521990 MROH7Q68CQ1 1323 aa16.53■□□□□ 0.24
TSPAN18-210ENST00000521990 BAZ2BQ9UIF8 2168 aaKnown RBP16.53■□□□□ 0.24
TSPAN18-210ENST00000521990 TIMP1P01033 207 aa16.53■□□□□ 0.24
TSPAN18-210ENST00000521990 IFNAR1P17181 557 aa16.53■□□□□ 0.24
TSPAN18-210ENST00000521990 CDC37Q16543 378 aaPredicted RBP16.53■□□□□ 0.24
TSPAN18-210ENST00000521990 TMTC3Q6ZXV5 915 aa16.53■□□□□ 0.24
TSPAN18-210ENST00000521990 FAM126BQ8IXS8 530 aa16.53■□□□□ 0.24
TSPAN18-210ENST00000521990 SLC17A8Q8NDX2 589 aa16.53■□□□□ 0.24
TSPAN18-210ENST00000521990 RNPC3Q96LT9 517 aaKnown RBP16.53■□□□□ 0.24
TSPAN18-210ENST00000521990 PPP1R12CQ9BZL4 782 aa16.53■□□□□ 0.24
TSPAN18-210ENST00000521990 COL6A3P12111 3177 aa16.53■□□□□ 0.24
TSPAN18-210ENST00000521990 MYH6P13533 1939 aa16.53■□□□□ 0.24
TSPAN18-210ENST00000521990 HSP90AA1P07900 732 aaKnown RBP16.52■□□□□ 0.24
TSPAN18-210ENST00000521990 PSMC6P62333 389 aa16.52■□□□□ 0.24
TSPAN18-210ENST00000521990 NTRK3Q16288 839 aa16.52■□□□□ 0.24
TSPAN18-210ENST00000521990 DUSP28Q4G0W2 176 aa16.52■□□□□ 0.24
TSPAN18-210ENST00000521990 ZNF697Q5TEC3 545 aa16.52■□□□□ 0.24
TSPAN18-210ENST00000521990 ADGRF4Q8IZF3 695 aa16.52■□□□□ 0.24
TSPAN18-210ENST00000521990 TBC1D5Q92609 795 aa16.52■□□□□ 0.24
TSPAN18-210ENST00000521990 GUCD1Q96NT3 240 aa16.52■□□□□ 0.24
TSPAN18-210ENST00000521990 SPZ1Q9BXG8 430 aa16.52■□□□□ 0.24
TSPAN18-210ENST00000521990 WDR11Q9BZH6 1224 aa16.52■□□□□ 0.24
TSPAN18-210ENST00000521990 VAT1LQ9HCJ6 419 aa16.52■□□□□ 0.24
TSPAN18-210ENST00000521990 PNMA2Q9UL42 364 aa16.52■□□□□ 0.24
TSPAN18-210ENST00000521990 STXBP5LQ9Y2K9 1186 aa16.52■□□□□ 0.24
TSPAN18-210ENST00000521990 GRIN2DO15399 1336 aa16.51■□□□□ 0.23
TSPAN18-210ENST00000521990 TLR3O15455 904 aaKnown RBP16.51■□□□□ 0.23
TSPAN18-210ENST00000521990 ZEB2O60315 1214 aa16.51■□□□□ 0.23
TSPAN18-210ENST00000521990 PDE4DQ08499 809 aa16.51■□□□□ 0.23
TSPAN18-210ENST00000521990 ST3GAL1Q11201 340 aa16.51■□□□□ 0.23
TSPAN18-210ENST00000521990 ITGA7Q13683 1181 aa16.51■□□□□ 0.23
TSPAN18-210ENST00000521990 FAM109BQ6ICB4 259 aaPredicted RBP16.51■□□□□ 0.23
TSPAN18-210ENST00000521990 MFSD5Q6N075 450 aa16.51■□□□□ 0.23
TSPAN18-210ENST00000521990 Q9Y3F1 56 aa16.51■□□□□ 0.23
TSPAN18-210ENST00000521990 CABYRO75952 493 aa16.5■□□□□ 0.23
TSPAN18-210ENST00000521990 PLEKHA8P1O95397 391 aa16.5■□□□□ 0.23
TSPAN18-210ENST00000521990 CSF2RAP15509 400 aa16.5■□□□□ 0.23
TSPAN18-210ENST00000521990 HMGN5P82970 282 aaKnown RBP16.5■□□□□ 0.23
TSPAN18-210ENST00000521990 SSRP1Q08945 709 aaKnown RBP16.5■□□□□ 0.23
TSPAN18-210ENST00000521990 FUT2Q10981 343 aa16.5■□□□□ 0.23
TSPAN18-210ENST00000521990 SLC35G1Q2M3R5 365 aa16.5■□□□□ 0.23
TSPAN18-210ENST00000521990 QRICH1Q2TAL8 776 aa16.5■□□□□ 0.23
TSPAN18-210ENST00000521990 TRIM22Q8IYM9 498 aa16.5■□□□□ 0.23
TSPAN18-210ENST00000521990 SRBD1Q8N5C6 995 aaKnown RBP16.5■□□□□ 0.23
TSPAN18-210ENST00000521990 SLC43A3Q8NBI5 491 aa16.5■□□□□ 0.23
TSPAN18-210ENST00000521990 NSUN7Q8NE18 718 aaKnown RBP16.5■□□□□ 0.23
TSPAN18-210ENST00000521990 IPO9Q96P70 1041 aaKnown RBP16.5■□□□□ 0.23
TSPAN18-210ENST00000521990 RNF26Q9BY78 433 aaPredicted RBP16.5■□□□□ 0.23
TSPAN18-210ENST00000521990 RIOX1Q9H6W3 641 aa16.5■□□□□ 0.23
TSPAN18-210ENST00000521990 LOC102724159A0A0B4J2E5 919 aa16.49■□□□□ 0.23
TSPAN18-210ENST00000521990 RBM47A0AV96 593 aaKnown RBP16.49■□□□□ 0.23
TSPAN18-210ENST00000521990 PRPF3O43395 683 aaKnown RBP16.49■□□□□ 0.23
TSPAN18-210ENST00000521990 CTDNEP1O95476 244 aa16.49■□□□□ 0.23
TSPAN18-210ENST00000521990 CD4P01730 458 aa16.49■□□□□ 0.23
TSPAN18-210ENST00000521990 CYP2C18P33260 490 aa16.49■□□□□ 0.23
TSPAN18-210ENST00000521990 SMAD3P84022 425 aaKnown RBP16.49■□□□□ 0.23
TSPAN18-210ENST00000521990 AKAP17AQ02040 695 aaKnown RBP16.49■□□□□ 0.23
TSPAN18-210ENST00000521990 PWP2Q15269 919 aaKnown RBP16.49■□□□□ 0.23
TSPAN18-210ENST00000521990 C16orf59Q7L2K0 433 aa16.49■□□□□ 0.23
TSPAN18-210ENST00000521990 OR6J1Q8NGC5 347 aa16.49■□□□□ 0.23
TSPAN18-210ENST00000521990 SMARCC2Q8TAQ2 1214 aa16.49■□□□□ 0.23
TSPAN18-210ENST00000521990 COPS5Q92905 334 aa16.49■□□□□ 0.23
TSPAN18-210ENST00000521990 MTMR8Q96EF0 704 aa16.49■□□□□ 0.23
TSPAN18-210ENST00000521990 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.49■□□□□ 0.23
TSPAN18-210ENST00000521990 TRPV6Q9H1D0 765 aa16.49■□□□□ 0.23
TSPAN18-210ENST00000521990 JMJD4Q9H9V9 463 aa16.49■□□□□ 0.23
TSPAN18-210ENST00000521990 SMC3Q9UQE7 1217 aa16.49■□□□□ 0.23
TSPAN18-210ENST00000521990 KIF3AQ9Y496 699 aa16.49■□□□□ 0.23
TSPAN18-210ENST00000521990 ABCB11O95342 1321 aa16.48■□□□□ 0.23
TSPAN18-210ENST00000521990 UMODL1Q5DID0 1318 aa16.48■□□□□ 0.23
TSPAN18-210ENST00000521990 STK36Q9NRP7 1315 aa16.48■□□□□ 0.23
TSPAN18-210ENST00000521990 CYTH3O43739 400 aa16.48■□□□□ 0.23
TSPAN18-210ENST00000521990 MYL3P08590 195 aa16.48■□□□□ 0.23
TSPAN18-210ENST00000521990 ACRP10323 421 aa16.48■□□□□ 0.23
TSPAN18-210ENST00000521990 EDNRBP24530 442 aa16.48■□□□□ 0.23
TSPAN18-210ENST00000521990 PPIGQ13427 754 aaKnown RBP eCLIP16.48■□□□□ 0.23
TSPAN18-210ENST00000521990 CMTR1Q8N1G2 835 aaKnown RBP16.48■□□□□ 0.23
TSPAN18-210ENST00000521990 CCDC82Q8N4S0 544 aa16.48■□□□□ 0.23
TSPAN18-210ENST00000521990 TMEM199Q8N511 208 aa16.48■□□□□ 0.23
TSPAN18-210ENST00000521990 DNERQ8NFT8 737 aa16.48■□□□□ 0.23
TSPAN18-210ENST00000521990 WASF1Q92558 559 aa16.48■□□□□ 0.23
TSPAN18-210ENST00000521990 RRP36Q96EU6 259 aaKnown RBP16.48■□□□□ 0.23
TSPAN18-210ENST00000521990 TAAR1Q96RJ0 339 aa16.48■□□□□ 0.23
TSPAN18-210ENST00000521990 MPHOSPH6Q99547 160 aaKnown RBP16.48■□□□□ 0.23
TSPAN18-210ENST00000521990 TTYH1Q9H313 450 aaPredicted RBP16.48■□□□□ 0.23
TSPAN18-210ENST00000521990 SEMA6BQ9H3T3 888 aa16.48■□□□□ 0.23
TSPAN18-210ENST00000521990 COL20A1Q9P218 1284 aa16.48■□□□□ 0.23
TSPAN18-210ENST00000521990 CNTNAP5Q8WYK1 1306 aa16.47■□□□□ 0.23
TSPAN18-210ENST00000521990 B4GALT4O60513 344 aa16.47■□□□□ 0.23
TSPAN18-210ENST00000521990 DEXIO95424 95 aa16.47■□□□□ 0.23
TSPAN18-210ENST00000521990 FBXO11Q86XK2 927 aa16.47■□□□□ 0.23
TSPAN18-210ENST00000521990 RGS22Q8NE09 1264 aa16.47■□□□□ 0.23
TSPAN18-210ENST00000521990 SYTL5Q8TDW5 730 aaPredicted RBP16.47■□□□□ 0.23
TSPAN18-210ENST00000521990 PPP1R13LQ8WUF5 828 aa16.47■□□□□ 0.23
TSPAN18-210ENST00000521990 PHKBQ93100 1093 aa16.47■□□□□ 0.23
TSPAN18-210ENST00000521990 CDX2Q99626 313 aaPredicted RBP16.47■□□□□ 0.23
TSPAN18-210ENST00000521990 SLC26A6Q9BXS9 759 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms