RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-231ENST00000521941 MEIS2O14770 477 aa9.61□□□□□ -0.87
CTNNA1-231ENST00000521941 CTAGE5O15320 804 aa9.61□□□□□ -0.87
CTNNA1-231ENST00000521941 ZEB2O60315 1214 aa9.61□□□□□ -0.87
CTNNA1-231ENST00000521941 SCG2P13521 617 aa9.61□□□□□ -0.87
CTNNA1-231ENST00000521941 CST5P28325 142 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-231ENST00000521941 ADCY7P51828 1080 aa9.61□□□□□ -0.87
CTNNA1-231ENST00000521941 AK2P54819 239 aa9.61□□□□□ -0.87
CTNNA1-231ENST00000521941 ANAPC15P60006 121 aa9.61□□□□□ -0.87
CTNNA1-231ENST00000521941 PSMC6P62333 389 aa9.61□□□□□ -0.87
CTNNA1-231ENST00000521941 CCSAPQ6IQ19 270 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-231ENST00000521941 SAMD3Q8N6K7 520 aa9.61□□□□□ -0.87
CTNNA1-231ENST00000521941 PPP1R13LQ8WUF5 828 aa9.61□□□□□ -0.87
CTNNA1-231ENST00000521941 TSEN34Q9BSV6 310 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-231ENST00000521941 RTEL1Q9NZ71 1219 aa9.61□□□□□ -0.87
CTNNA1-231ENST00000521941 A0A0U1RQG5 324 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-231ENST00000521941 SMCO2A6NFE2 343 aa9.6□□□□□ -0.87
CTNNA1-231ENST00000521941 NKRFO15226 690 aaKnown RBP eCLIP9.6□□□□□ -0.87
CTNNA1-231ENST00000521941 EIF3JO75822 258 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-231ENST00000521941 GH1P01241 217 aa9.6□□□□□ -0.87
CTNNA1-231ENST00000521941 CPT1AP50416 773 aa9.6□□□□□ -0.87
CTNNA1-231ENST00000521941 MDM2Q00987 491 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-231ENST00000521941 TLE2Q04725 743 aa9.6□□□□□ -0.87
CTNNA1-231ENST00000521941 PFKFB3Q16875 520 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-231ENST00000521941 BRDTQ58F21 947 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-231ENST00000521941 PPP1R18Q6NYC8 613 aa9.6□□□□□ -0.87
CTNNA1-231ENST00000521941 FBXL16Q8N461 479 aa9.6□□□□□ -0.87
CTNNA1-231ENST00000521941 SLKQ9H2G2 1235 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-231ENST00000521941 TMEM260Q9NX78 707 aa9.6□□□□□ -0.87
CTNNA1-231ENST00000521941 BARHL2Q9NY43 387 aa9.6□□□□□ -0.87
CTNNA1-231ENST00000521941 VPS54Q9P1Q0 977 aa9.6□□□□□ -0.87
CTNNA1-231ENST00000521941 PRKAG2Q9UGJ0 569 aa9.6□□□□□ -0.87
CTNNA1-231ENST00000521941 TPCN1Q9ULQ1 816 aa9.6□□□□□ -0.87
CTNNA1-231ENST00000521941 PCDHA6Q9UN73 950 aa9.6□□□□□ -0.87
CTNNA1-231ENST00000521941 PCDHA8Q9Y5H6 950 aa9.6□□□□□ -0.87
CTNNA1-231ENST00000521941 GTF3C3Q9Y5Q9 886 aa9.6□□□□□ -0.87
CTNNA1-231ENST00000521941 LTBP2Q14767 1821 aa9.6□□□□□ -0.87
CTNNA1-231ENST00000521941 FRMPD4Q14CM0 1322 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 DNAH12Q6ZR08 3092 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 hCG_1984214I3L0E3 225 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 PIK3CDO00329 1044 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 PRPF3O43395 683 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 RGS20O76081 388 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 LARGE1O95461 756 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 GGPS1O95749 300 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 IFNAR1P17181 557 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 NEK4P51957 841 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 MRPS9P82933 396 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 SP4Q02446 784 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 ARHGAP1Q07960 439 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 SSRP1Q08945 709 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 SCRN1Q12765 414 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 NTRK3Q16288 839 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 PKN1Q16512 942 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 GNPTABQ3T906 1256 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 FAM47CQ5HY64 1035 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 JAKMIP3Q5VZ66 844 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 CCDC62Q6P9F0 684 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 CPLX2Q6PUV4 134 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 VSIG10LQ86VR7 867 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 DHX37Q8IY37 1157 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 TRIM22Q8IYM9 498 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 ZNF713Q8N859 430 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 RASGRP4Q8TDF6 673 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 AFG1LQ8WV93 481 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 ZNF274Q96GC6 653 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 RNF26Q9BY78 433 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 ANO3Q9BYT9 981 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 EHMT1Q9H9B1 1298 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 RIC8AQ9NPQ8 531 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 PDLIM7Q9NR12 457 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 POLR3EQ9NVU0 708 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 PKD2L1Q9P0L9 805 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 RBM27Q9P2N5 1060 aaKnown RBP9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 COLQQ9Y215 455 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 Q9Y3F1 56 aa9.59□□□□□ -0.87
CTNNA1-231ENST00000521941 ADAMTS3O15072 1205 aa9.58□□□□□ -0.88
CTNNA1-231ENST00000521941 MMP3P08254 477 aa9.58□□□□□ -0.88
CTNNA1-231ENST00000521941 CLTBP09497 229 aa9.58□□□□□ -0.88
CTNNA1-231ENST00000521941 ZNF286BP0CG31 522 aa9.58□□□□□ -0.88
CTNNA1-231ENST00000521941 UBA1P22314 1058 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-231ENST00000521941 MAGEA10P43363 369 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-231ENST00000521941 FOSBP53539 338 aa9.58□□□□□ -0.88
CTNNA1-231ENST00000521941 EVCP57679 992 aa9.58□□□□□ -0.88
CTNNA1-231ENST00000521941 ITGA7Q13683 1181 aa9.58□□□□□ -0.88
CTNNA1-231ENST00000521941 SNX17Q15036 470 aa9.58□□□□□ -0.88
CTNNA1-231ENST00000521941 ANKRD1Q15327 319 aa9.58□□□□□ -0.88
CTNNA1-231ENST00000521941 PCNX4Q63HM2 1172 aa9.58□□□□□ -0.88
CTNNA1-231ENST00000521941 SH3RF1Q7Z6J0 888 aa9.58□□□□□ -0.88
CTNNA1-231ENST00000521941 NECAB1Q8N987 351 aa9.58□□□□□ -0.88
CTNNA1-231ENST00000521941 CCDC148Q8NFR7 591 aa9.58□□□□□ -0.88
CTNNA1-231ENST00000521941 CCDC12Q8WUD4 166 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-231ENST00000521941 AIFM3Q96NN9 605 aa9.58□□□□□ -0.88
CTNNA1-231ENST00000521941 LBHD1Q9BQE6 289 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-231ENST00000521941 C22orf23Q9BZE7 217 aa9.58□□□□□ -0.88
CTNNA1-231ENST00000521941 MLXIPQ9HAP2 919 aa9.58□□□□□ -0.88
CTNNA1-231ENST00000521941 C6orf50Q9HD87 102 aa9.58□□□□□ -0.88
CTNNA1-231ENST00000521941 DDX41Q9UJV9 622 aaKnown RBP9.58□□□□□ -0.88
CTNNA1-231ENST00000521941 ELP1O95163 1332 aa9.57□□□□□ -0.88
CTNNA1-231ENST00000521941 MROH7Q68CQ1 1323 aa9.57□□□□□ -0.88
CTNNA1-231ENST00000521941 CEP290O15078 2479 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms