RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 NUP133Q8WUM0 1156 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 ATG4CQ96DT6 458 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 AGBL1Q96MI9 1066 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 LZTS2Q9BRK4 669 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 MYL10Q9BUA6 226 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 UBA5Q9GZZ9 404 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 R3HDMLQ9H3Y0 253 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 RIOX1Q9H6W3 641 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 SLC38A10Q9HBR0 1119 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 RBM28Q9NW13 759 aaKnown RBP9.7□□□□□ -0.86
VPS13B-210ENST00000521932 MORF4L1Q9UBU8 362 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 PRR12Q9ULL5 1215 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 TPCN1Q9ULQ1 816 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 RABGAP1Q9Y3P9 1069 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 FRMPD2Q68DX3 1309 aaPredicted RBP9.7□□□□□ -0.86
VPS13B-210ENST00000521932 NID2Q14112 1375 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 RLFQ13129 1914 aa9.7□□□□□ -0.86
VPS13B-210ENST00000521932 CCDC196A0A1B0GTZ2 297 aa9.69□□□□□ -0.86
VPS13B-210ENST00000521932 H3BM21 787 aa9.69□□□□□ -0.86
VPS13B-210ENST00000521932 ERVH48-1M5A8F1 160 aa9.69□□□□□ -0.86
VPS13B-210ENST00000521932 WIPF1O43516 503 aa9.69□□□□□ -0.86
VPS13B-210ENST00000521932 CYTH3O43739 400 aa9.69□□□□□ -0.86
VPS13B-210ENST00000521932 LILRA1O75019 489 aa9.69□□□□□ -0.86
VPS13B-210ENST00000521932 ZBED4O75132 1171 aa9.69□□□□□ -0.86
VPS13B-210ENST00000521932 CNMDO75829 334 aa9.69□□□□□ -0.86
VPS13B-210ENST00000521932 RXRAP19793 462 aa9.69□□□□□ -0.86
VPS13B-210ENST00000521932 CDC27P30260 824 aa9.69□□□□□ -0.86
VPS13B-210ENST00000521932 SLC16A2P36021 539 aa9.69□□□□□ -0.86
VPS13B-210ENST00000521932 METAP2P50579 478 aaKnown RBP eCLIP9.69□□□□□ -0.86
VPS13B-210ENST00000521932 OAZ1P54368 228 aa9.69□□□□□ -0.86
VPS13B-210ENST00000521932 FAM110CQ1W6H9 321 aa9.69□□□□□ -0.86
VPS13B-210ENST00000521932 SYDE2Q5VT97 1194 aa9.69□□□□□ -0.86
VPS13B-210ENST00000521932 NBPF11Q86T75 865 aa9.69□□□□□ -0.86
VPS13B-210ENST00000521932 MICU3Q86XE3 530 aa9.69□□□□□ -0.86
VPS13B-210ENST00000521932 ADGRF4Q8IZF3 695 aa9.69□□□□□ -0.86
VPS13B-210ENST00000521932 CHMP4CQ96CF2 233 aa9.69□□□□□ -0.86
VPS13B-210ENST00000521932 MTMR8Q96EF0 704 aa9.69□□□□□ -0.86
VPS13B-210ENST00000521932 TSEN34Q9BSV6 310 aaKnown RBP9.69□□□□□ -0.86
VPS13B-210ENST00000521932 RANBP17Q9H2T7 1088 aaKnown RBP9.69□□□□□ -0.86
VPS13B-210ENST00000521932 TXNRD2Q9NNW7 524 aa9.69□□□□□ -0.86
VPS13B-210ENST00000521932 BTBD7Q9P203 1132 aa9.69□□□□□ -0.86
VPS13B-210ENST00000521932 ZNF536O15090 1300 aa9.68□□□□□ -0.86
VPS13B-210ENST00000521932 GOLGA8AA7E2F4 631 aa9.68□□□□□ -0.86
VPS13B-210ENST00000521932 GOLGA8BA8MQT2 603 aa9.68□□□□□ -0.86
VPS13B-210ENST00000521932 ADD1P35611 737 aaKnown RBP9.68□□□□□ -0.86
VPS13B-210ENST00000521932 DHX9Q08211 1270 aaKnown RBP9.68□□□□□ -0.86
VPS13B-210ENST00000521932 IKQ13123 557 aaPredicted RBP9.68□□□□□ -0.86
VPS13B-210ENST00000521932 TMEM132BQ14DG7 1078 aa9.68□□□□□ -0.86
VPS13B-210ENST00000521932 NTRK3Q16288 839 aa9.68□□□□□ -0.86
VPS13B-210ENST00000521932 ME3Q16798 604 aa9.68□□□□□ -0.86
VPS13B-210ENST00000521932 RTN1Q16799 776 aa9.68□□□□□ -0.86
VPS13B-210ENST00000521932 SLC35G1Q2M3R5 365 aa9.68□□□□□ -0.86
VPS13B-210ENST00000521932 TMTC3Q6ZXV5 915 aa9.68□□□□□ -0.86
VPS13B-210ENST00000521932 CCDC144CPQ8IYA2 1237 aa9.68□□□□□ -0.86
VPS13B-210ENST00000521932 SRBD1Q8N5C6 995 aaKnown RBP9.68□□□□□ -0.86
VPS13B-210ENST00000521932 ANKRD13CQ8N6S4 541 aa9.68□□□□□ -0.86
VPS13B-210ENST00000521932 KDF1Q8NAX2 398 aaPredicted RBP9.68□□□□□ -0.86
VPS13B-210ENST00000521932 GPRC5AQ8NFJ5 357 aa9.68□□□□□ -0.86
VPS13B-210ENST00000521932 SPZ1Q9BXG8 430 aa9.68□□□□□ -0.86
VPS13B-210ENST00000521932 SPATC1LQ9H0A9 340 aa9.68□□□□□ -0.86
VPS13B-210ENST00000521932 CPVLQ9H3G5 476 aa9.68□□□□□ -0.86
VPS13B-210ENST00000521932 JMJD4Q9H9V9 463 aa9.68□□□□□ -0.86
VPS13B-210ENST00000521932 GDPD2Q9HCC8 539 aa9.68□□□□□ -0.86
VPS13B-210ENST00000521932 CPA4Q9UI42 421 aa9.68□□□□□ -0.86
VPS13B-210ENST00000521932 ZNF214Q9UL59 606 aaPredicted RBP9.68□□□□□ -0.86
VPS13B-210ENST00000521932 LIMCH1Q9UPQ0 1083 aa9.68□□□□□ -0.86
VPS13B-210ENST00000521932 GPR25O00155 361 aa9.67□□□□□ -0.86
VPS13B-210ENST00000521932 ZBTB5O15062 677 aa9.67□□□□□ -0.86
VPS13B-210ENST00000521932 MAN1A2O60476 641 aa9.67□□□□□ -0.86
VPS13B-210ENST00000521932 PFKFB2O60825 505 aa9.67□□□□□ -0.86
VPS13B-210ENST00000521932 UPP2O95045 317 aa9.67□□□□□ -0.86
VPS13B-210ENST00000521932 PLEKHA8P1O95397 391 aa9.67□□□□□ -0.86
VPS13B-210ENST00000521932 ICAM1P05362 532 aa9.67□□□□□ -0.86
VPS13B-210ENST00000521932 MCM2P49736 904 aa9.67□□□□□ -0.86
VPS13B-210ENST00000521932 ERVK-9P63128 1117 aa9.67□□□□□ -0.86
VPS13B-210ENST00000521932 ERVK-24P63145 666 aa9.67□□□□□ -0.86
VPS13B-210ENST00000521932 SP3Q02447 781 aa9.67□□□□□ -0.86
VPS13B-210ENST00000521932 SCRN1Q12765 414 aa9.67□□□□□ -0.86
VPS13B-210ENST00000521932 RAB11FIP4Q86YS3 637 aa9.67□□□□□ -0.86
VPS13B-210ENST00000521932 RIOX2Q8IUF8 465 aa9.67□□□□□ -0.86
VPS13B-210ENST00000521932 ZSCAN31Q96LW9 406 aaPredicted RBP9.67□□□□□ -0.86
VPS13B-210ENST00000521932 SLKQ9H2G2 1235 aaPredicted RBP9.67□□□□□ -0.86
VPS13B-210ENST00000521932 PNMA2Q9UL42 364 aa9.67□□□□□ -0.86
VPS13B-210ENST00000521932 ISY1Q9ULR0 285 aaKnown RBP9.67□□□□□ -0.86
VPS13B-210ENST00000521932 PCDHB9Q9Y5E1 797 aa9.67□□□□□ -0.86
VPS13B-210ENST00000521932 PARP14Q460N5 1801 aa9.67□□□□□ -0.86
VPS13B-210ENST00000521932 A0A0G2JMZ2 1700 aa9.66□□□□□ -0.86
VPS13B-210ENST00000521932 PNMA6FA0A0J9YX94 578 aa9.66□□□□□ -0.86
VPS13B-210ENST00000521932 FOXN1O15353 648 aa9.66□□□□□ -0.86
VPS13B-210ENST00000521932 SPINT1O43278 529 aa9.66□□□□□ -0.86
VPS13B-210ENST00000521932 DHX16O60231 1041 aaKnown RBP9.66□□□□□ -0.86
VPS13B-210ENST00000521932 PEX10O60683 326 aa9.66□□□□□ -0.86
VPS13B-210ENST00000521932 SLC25A27O95847 323 aa9.66□□□□□ -0.86
VPS13B-210ENST00000521932 HSPA1AP0DMV8 641 aaKnown RBP9.66□□□□□ -0.86
VPS13B-210ENST00000521932 HSPA1BP0DMV9 641 aaKnown RBP9.66□□□□□ -0.86
VPS13B-210ENST00000521932 IFNAR1P17181 557 aa9.66□□□□□ -0.86
VPS13B-210ENST00000521932 STAT3P40763 770 aa9.66□□□□□ -0.86
VPS13B-210ENST00000521932 CCT2P78371 535 aaKnown RBP9.66□□□□□ -0.86
VPS13B-210ENST00000521932 CCNA1P78396 465 aa9.66□□□□□ -0.86
VPS13B-210ENST00000521932 LACTBP83111 547 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms