RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 RBBP8NLQ8NC74 664 aaPredicted RBP8.18□□□□□ -1.1
PABPC1-216ENST00000520868 ZNF512BQ96KM6 892 aaPredicted RBP8.18□□□□□ -1.1
PABPC1-216ENST00000520868 FAM84AQ96KN4 292 aa8.18□□□□□ -1.1
PABPC1-216ENST00000520868 MTFR1LQ9H019 292 aa8.18□□□□□ -1.1
PABPC1-216ENST00000520868 PCDHB12Q9Y5F1 795 aa8.18□□□□□ -1.1
PABPC1-216ENST00000520868 BCL9O00512 1426 aa8.18□□□□□ -1.1
PABPC1-216ENST00000520868 PIK3C2AO00443 1686 aa8.18□□□□□ -1.1
PABPC1-216ENST00000520868 SIGLEC6O43699 453 aa8.17□□□□□ -1.1
PABPC1-216ENST00000520868 IL2RBP14784 551 aa8.17□□□□□ -1.1
PABPC1-216ENST00000520868 NR0B2Q15466 257 aa8.17□□□□□ -1.1
PABPC1-216ENST00000520868 TMC3Q7Z5M5 1100 aa8.17□□□□□ -1.1
PABPC1-216ENST00000520868 NT5DC4Q86YG4 428 aa8.17□□□□□ -1.1
PABPC1-216ENST00000520868 ANKS4BQ8N8V4 417 aa8.17□□□□□ -1.1
PABPC1-216ENST00000520868 RGS22Q8NE09 1264 aa8.17□□□□□ -1.1
PABPC1-216ENST00000520868 TCTN2Q96GX1 697 aa8.17□□□□□ -1.1
PABPC1-216ENST00000520868 PRDM14Q9GZV8 571 aa8.17□□□□□ -1.1
PABPC1-216ENST00000520868 SP110Q9HB58 689 aa8.17□□□□□ -1.1
PABPC1-216ENST00000520868 PRR13Q9NZ81 148 aa8.17□□□□□ -1.1
PABPC1-216ENST00000520868 SUCOQ9UBS9 1254 aaKnown RBP8.17□□□□□ -1.1
PABPC1-216ENST00000520868 EBF1Q9UH73 591 aa8.17□□□□□ -1.1
PABPC1-216ENST00000520868 SBF2Q86WG5 1849 aa8.17□□□□□ -1.1
PABPC1-216ENST00000520868 PRAMEF1O95521 474 aa8.16□□□□□ -1.1
PABPC1-216ENST00000520868 HDLBPQ00341 1268 aaKnown RBP8.16□□□□□ -1.1
PABPC1-216ENST00000520868 SNW1Q13573 536 aaKnown RBP8.16□□□□□ -1.1
PABPC1-216ENST00000520868 HDGFL2Q7Z4V5 671 aaPredicted RBP8.16□□□□□ -1.1
PABPC1-216ENST00000520868 LINC00116Q8NCU8 138 aa8.16□□□□□ -1.1
PABPC1-216ENST00000520868 BHLHE22Q8NFJ8 381 aaPredicted RBP8.16□□□□□ -1.1
PABPC1-216ENST00000520868 SMARCC1Q92922 1105 aaPredicted RBP8.16□□□□□ -1.1
PABPC1-216ENST00000520868 LTV1Q96GA3 475 aaPredicted RBP8.16□□□□□ -1.1
PABPC1-216ENST00000520868 DIRC2Q96SL1 478 aa8.16□□□□□ -1.1
PABPC1-216ENST00000520868 CRBNQ96SW2 442 aa8.16□□□□□ -1.1
PABPC1-216ENST00000520868 CARD11Q9BXL7 1154 aa8.16□□□□□ -1.1
PABPC1-216ENST00000520868 SLC12A5Q9H2X9 1139 aa8.16□□□□□ -1.1
PABPC1-216ENST00000520868 KIAA1522Q9P206 1035 aaPredicted RBP8.16□□□□□ -1.1
PABPC1-216ENST00000520868 FBXL21Q9UKT6 434 aa8.16□□□□□ -1.1
PABPC1-216ENST00000520868 TCFL5Q9UL49 500 aa8.16□□□□□ -1.1
PABPC1-216ENST00000520868 PPT2Q9UMR5 302 aa8.16□□□□□ -1.1
PABPC1-216ENST00000520868 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.16□□□□□ -1.1
PABPC1-216ENST00000520868 ENDOUP21128 410 aaKnown RBP8.15□□□□□ -1.1
PABPC1-216ENST00000520868 RPL10P27635 214 aaKnown RBP8.15□□□□□ -1.1
PABPC1-216ENST00000520868 AUHQ13825 339 aaKnown RBP8.15□□□□□ -1.1
PABPC1-216ENST00000520868 ZNF827Q17R98 1081 aa8.15□□□□□ -1.1
PABPC1-216ENST00000520868 TIGD5Q53EQ6 642 aa8.15□□□□□ -1.1
PABPC1-216ENST00000520868 USHBP1Q8N6Y0 703 aa8.15□□□□□ -1.1
PABPC1-216ENST00000520868 RASGRP4Q8TDF6 673 aa8.15□□□□□ -1.1
PABPC1-216ENST00000520868 GPRASP2Q96D09 838 aa8.15□□□□□ -1.1
PABPC1-216ENST00000520868 FOXP3Q9BZS1 431 aa8.15□□□□□ -1.1
PABPC1-216ENST00000520868 CHST7Q9NS84 486 aa8.15□□□□□ -1.1
PABPC1-216ENST00000520868 ZNF281Q9Y2X9 895 aa8.15□□□□□ -1.1
PABPC1-216ENST00000520868 CASZ1Q86V15 1759 aa8.15□□□□□ -1.11
PABPC1-216ENST00000520868 RGPD5Q99666 1765 aa8.15□□□□□ -1.11
PABPC1-216ENST00000520868 TRPM1Q7Z4N2 1603 aa8.14□□□□□ -1.11
PABPC1-216ENST00000520868 NFAT5O94916 1531 aa8.14□□□□□ -1.11
PABPC1-216ENST00000520868 TNS2Q63HR2 1409 aa8.14□□□□□ -1.11
PABPC1-216ENST00000520868 ACRP10323 421 aa8.14□□□□□ -1.11
PABPC1-216ENST00000520868 GUCY2CP25092 1073 aa8.14□□□□□ -1.11
PABPC1-216ENST00000520868 SOX9P48436 509 aa8.14□□□□□ -1.11
PABPC1-216ENST00000520868 PMS1P54277 932 aaKnown RBP8.14□□□□□ -1.11
PABPC1-216ENST00000520868 SNX17Q15036 470 aa8.14□□□□□ -1.11
PABPC1-216ENST00000520868 GPR162Q16538 588 aa8.14□□□□□ -1.11
PABPC1-216ENST00000520868 CCDC144CPQ8IYA2 1237 aa8.14□□□□□ -1.11
PABPC1-216ENST00000520868 LINC01599Q8WXQ3 324 aa8.14□□□□□ -1.11
PABPC1-216ENST00000520868 PPP1R16BQ96T49 567 aa8.14□□□□□ -1.11
PABPC1-216ENST00000520868 CWC22Q9HCG8 908 aaKnown RBP8.14□□□□□ -1.11
PABPC1-216ENST00000520868 GINM1Q9NU53 330 aa8.14□□□□□ -1.11
PABPC1-216ENST00000520868 ZMYM5Q9UJ78 669 aa8.14□□□□□ -1.11
PABPC1-216ENST00000520868 RGPD3A6NKT7 1758 aaPredicted RBP8.14□□□□□ -1.11
PABPC1-216ENST00000520868 RGPD4Q7Z3J3 1758 aa8.14□□□□□ -1.11
PABPC1-216ENST00000520868 SBNO2Q9Y2G9 1366 aa8.13□□□□□ -1.11
PABPC1-216ENST00000520868 FAM86C2PA6NEL3 165 aa8.13□□□□□ -1.11
PABPC1-216ENST00000520868 FBLN1P23142 703 aa8.13□□□□□ -1.11
PABPC1-216ENST00000520868 BBS9Q3SYG4 887 aa8.13□□□□□ -1.11
PABPC1-216ENST00000520868 IP6K1Q92551 441 aa8.13□□□□□ -1.11
PABPC1-216ENST00000520868 RNF32Q9H0A6 362 aa8.13□□□□□ -1.11
PABPC1-216ENST00000520868 NSUN3Q9H649 340 aaKnown RBP8.13□□□□□ -1.11
PABPC1-216ENST00000520868 TERF2IPQ9NYB0 399 aa8.13□□□□□ -1.11
PABPC1-216ENST00000520868 MINPP1Q9UNW1 487 aa8.13□□□□□ -1.11
PABPC1-216ENST00000520868 EFR3BQ9Y2G0 817 aa8.13□□□□□ -1.11
PABPC1-216ENST00000520868 MYOM1P52179 1685 aa8.13□□□□□ -1.11
PABPC1-216ENST00000520868 AKAP12Q02952 1782 aa8.12□□□□□ -1.11
PABPC1-216ENST00000520868 KAT6BQ8WYB5 2073 aa8.12□□□□□ -1.11
PABPC1-216ENST00000520868 UNCXA6NJT0 531 aa8.12□□□□□ -1.11
PABPC1-216ENST00000520868 SYPP08247 313 aa8.12□□□□□ -1.11
PABPC1-216ENST00000520868 POLD1P28340 1107 aa8.12□□□□□ -1.11
PABPC1-216ENST00000520868 KIR2DL1P43626 348 aaPredicted RBP8.12□□□□□ -1.11
PABPC1-216ENST00000520868 KIR2DL2P43627 348 aaPredicted RBP8.12□□□□□ -1.11
PABPC1-216ENST00000520868 GJA8P48165 433 aa8.12□□□□□ -1.11
PABPC1-216ENST00000520868 GALK1P51570 392 aa8.12□□□□□ -1.11
PABPC1-216ENST00000520868 LSRQ86X29 649 aaPredicted RBP8.12□□□□□ -1.11
PABPC1-216ENST00000520868 C7orf61Q8IZ16 206 aa8.12□□□□□ -1.11
PABPC1-216ENST00000520868 FBXO15Q8NCQ5 510 aaPredicted RBP8.12□□□□□ -1.11
PABPC1-216ENST00000520868 OR6P1Q8NGX9 317 aa8.12□□□□□ -1.11
PABPC1-216ENST00000520868 TGIF2Q9GZN2 237 aa8.12□□□□□ -1.11
PABPC1-216ENST00000520868 SLC6A17Q9H1V8 727 aa8.12□□□□□ -1.11
PABPC1-216ENST00000520868 GFOD1Q9NXC2 390 aa8.12□□□□□ -1.11
PABPC1-216ENST00000520868 SLC12A7Q9Y666 1083 aa8.12□□□□□ -1.11
PABPC1-216ENST00000520868 WNK3Q9BYP7 1800 aa8.12□□□□□ -1.11
PABPC1-216ENST00000520868 CD163L1Q9NR16 1453 aa8.12□□□□□ -1.11
PABPC1-216ENST00000520868 PNPLA7Q6ZV29 1317 aa8.11□□□□□ -1.11
PABPC1-216ENST00000520868 KRT1P04264 644 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms