RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 EPB41L4AQ9HCS5 686 aaPredicted RBP9.51□□□□□ -0.89
CSMD1-209ENST00000520630 BAZ2BQ9UIF8 2168 aaKnown RBP9.51□□□□□ -0.89
CSMD1-209ENST00000520630 CFAP47Q6ZTR5 3102 aa9.51□□□□□ -0.89
CSMD1-209ENST00000520630 PLIN4Q96Q06 1357 aa9.5□□□□□ -0.89
CSMD1-209ENST00000520630 C2orf16Q68DN1 1984 aa9.5□□□□□ -0.89
CSMD1-209ENST00000520630 NFIBO00712 420 aa9.5□□□□□ -0.89
CSMD1-209ENST00000520630 LINC01565O15544 149 aa9.5□□□□□ -0.89
CSMD1-209ENST00000520630 PRDM1O75626 825 aa9.5□□□□□ -0.89
CSMD1-209ENST00000520630 HYAL1Q12794 435 aa9.5□□□□□ -0.89
CSMD1-209ENST00000520630 HDAC1Q13547 482 aaPredicted RBP9.5□□□□□ -0.89
CSMD1-209ENST00000520630 BAATQ14032 418 aaPredicted RBP9.5□□□□□ -0.89
CSMD1-209ENST00000520630 TKFCQ3LXA3 575 aa9.5□□□□□ -0.89
CSMD1-209ENST00000520630 CAGE1Q8TC20 777 aa9.5□□□□□ -0.89
CSMD1-209ENST00000520630 RHPN1Q8TCX5 695 aa9.5□□□□□ -0.89
CSMD1-209ENST00000520630 STAG1Q8WVM7 1258 aa9.5□□□□□ -0.89
CSMD1-209ENST00000520630 PBXIP1Q96AQ6 731 aa9.5□□□□□ -0.89
CSMD1-209ENST00000520630 STRBPQ96SI9 672 aaKnown RBP9.5□□□□□ -0.89
CSMD1-209ENST00000520630 PAG1Q9NWQ8 432 aa9.5□□□□□ -0.89
CSMD1-209ENST00000520630 CLDND1Q9NY35 253 aa9.5□□□□□ -0.89
CSMD1-209ENST00000520630 PRR12Q9ULL5 1215 aa9.5□□□□□ -0.89
CSMD1-209ENST00000520630 DENND4AQ7Z401 1863 aa9.5□□□□□ -0.89
CSMD1-209ENST00000520630 EPG5Q9HCE0 2579 aa9.5□□□□□ -0.89
CSMD1-209ENST00000520630 EP300Q09472 2414 aaPredicted RBP9.5□□□□□ -0.89
CSMD1-209ENST00000520630 TPRP12270 2363 aaKnown RBP9.49□□□□□ -0.89
CSMD1-209ENST00000520630 PROB1E7EW31 1015 aa9.49□□□□□ -0.89
CSMD1-209ENST00000520630 PLA2G6O60733 806 aa9.49□□□□□ -0.89
CSMD1-209ENST00000520630 FDX1P10109 184 aa9.49□□□□□ -0.89
CSMD1-209ENST00000520630 EDNRBP24530 442 aa9.49□□□□□ -0.89
CSMD1-209ENST00000520630 STAT2P52630 851 aa9.49□□□□□ -0.89
CSMD1-209ENST00000520630 ZXDAP98168 799 aa9.49□□□□□ -0.89
CSMD1-209ENST00000520630 ZNF200P98182 395 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-209ENST00000520630 GPM6BQ13491 265 aa9.49□□□□□ -0.89
CSMD1-209ENST00000520630 CAMK1Q14012 370 aa9.49□□□□□ -0.89
CSMD1-209ENST00000520630 UBE3CQ15386 1083 aa9.49□□□□□ -0.89
CSMD1-209ENST00000520630 ZNF618Q5T7W0 954 aa9.49□□□□□ -0.89
CSMD1-209ENST00000520630 CCDC62Q6P9F0 684 aa9.49□□□□□ -0.89
CSMD1-209ENST00000520630 NSMFQ6X4W1 530 aa9.49□□□□□ -0.89
CSMD1-209ENST00000520630 SLC30A10Q6XR72 485 aa9.49□□□□□ -0.89
CSMD1-209ENST00000520630 KCTD1Q719H9 257 aa9.49□□□□□ -0.89
CSMD1-209ENST00000520630 CENPQQ7L2Z9 268 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-209ENST00000520630 CLEC4DQ8WXI8 215 aa9.49□□□□□ -0.89
CSMD1-209ENST00000520630 ASIC4Q96FT7 647 aa9.49□□□□□ -0.89
CSMD1-209ENST00000520630 BOLA2Q9H3K6 86 aa9.49□□□□□ -0.89
CSMD1-209ENST00000520630 RWDD1Q9H446 243 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-209ENST00000520630 NSUN3Q9H649 340 aaKnown RBP9.49□□□□□ -0.89
CSMD1-209ENST00000520630 ARPP21Q9UBL0 812 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-209ENST00000520630 INSL6Q9Y581 213 aa9.49□□□□□ -0.89
CSMD1-209ENST00000520630 CTDP1Q9Y5B0 961 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-209ENST00000520630 CEP250Q9BV73 2442 aa9.48□□□□□ -0.89
CSMD1-209ENST00000520630 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-209ENST00000520630 MINDY4BA8MYZ0 360 aa9.48□□□□□ -0.89
CSMD1-209ENST00000520630 LOC730098B7Z3J9 87 aa9.48□□□□□ -0.89
CSMD1-209ENST00000520630 TTLL1O95922 423 aa9.48□□□□□ -0.89
CSMD1-209ENST00000520630 MCCP23508 829 aa9.48□□□□□ -0.89
CSMD1-209ENST00000520630 IKBKEQ14164 716 aa9.48□□□□□ -0.89
CSMD1-209ENST00000520630 TIGD5Q53EQ6 642 aa9.48□□□□□ -0.89
CSMD1-209ENST00000520630 EP400NLQ6ZTU2 488 aa9.48□□□□□ -0.89
CSMD1-209ENST00000520630 TMEM192Q8IY95 271 aa9.48□□□□□ -0.89
CSMD1-209ENST00000520630 FBXL6Q8N531 539 aa9.48□□□□□ -0.89
CSMD1-209ENST00000520630 DBF4BQ8NFT6 615 aa9.48□□□□□ -0.89
CSMD1-209ENST00000520630 NEDD1Q8NHV4 660 aa9.48□□□□□ -0.89
CSMD1-209ENST00000520630 GMCL1Q96IK5 515 aa9.48□□□□□ -0.89
CSMD1-209ENST00000520630 MSLNLQ96KJ4 702 aa9.48□□□□□ -0.89
CSMD1-209ENST00000520630 UPF3BQ9BZI7 483 aaKnown RBP9.48□□□□□ -0.89
CSMD1-209ENST00000520630 HDAC6Q9UBN7 1215 aa9.48□□□□□ -0.89
CSMD1-209ENST00000520630 GTF2IRD1Q9UHL9 959 aa9.48□□□□□ -0.89
CSMD1-209ENST00000520630 SYNPO2Q9UMS6 1093 aa9.48□□□□□ -0.89
CSMD1-209ENST00000520630 MAP1BP46821 2468 aaKnown RBP9.47□□□□□ -0.89
CSMD1-209ENST00000520630 STXBP3O00186 592 aa9.47□□□□□ -0.89
CSMD1-209ENST00000520630 HAS3O00219 553 aa9.47□□□□□ -0.89
CSMD1-209ENST00000520630 GRM6O15303 877 aa9.47□□□□□ -0.89
CSMD1-209ENST00000520630 KPNA6O60684 536 aa9.47□□□□□ -0.89
CSMD1-209ENST00000520630 PDGFBP01127 241 aaPredicted RBP9.47□□□□□ -0.89
CSMD1-209ENST00000520630 MMP3P08254 477 aa9.47□□□□□ -0.89
CSMD1-209ENST00000520630 CHMP4BP1P59074 171 aa9.47□□□□□ -0.89
CSMD1-209ENST00000520630 ARHGAP1Q07960 439 aa9.47□□□□□ -0.89
CSMD1-209ENST00000520630 CBX2Q14781 532 aaPredicted RBP9.47□□□□□ -0.89
CSMD1-209ENST00000520630 TTBK2Q6IQ55 1244 aa9.47□□□□□ -0.89
CSMD1-209ENST00000520630 FAM160B2Q86V87 743 aa9.47□□□□□ -0.89
CSMD1-209ENST00000520630 FBXO11Q86XK2 927 aa9.47□□□□□ -0.89
CSMD1-209ENST00000520630 SMC5Q8IY18 1101 aa9.47□□□□□ -0.89
CSMD1-209ENST00000520630 CHURC1Q8WUH1 139 aa9.47□□□□□ -0.89
CSMD1-209ENST00000520630 AFG1LQ8WV93 481 aa9.47□□□□□ -0.89
CSMD1-209ENST00000520630 TOP1MTQ969P6 601 aa9.47□□□□□ -0.89
CSMD1-209ENST00000520630 HAUS7Q99871 368 aa9.47□□□□□ -0.89
CSMD1-209ENST00000520630 RANBP17Q9H2T7 1088 aaKnown RBP9.47□□□□□ -0.89
CSMD1-209ENST00000520630 MKNK2Q9HBH9 465 aa9.47□□□□□ -0.89
CSMD1-209ENST00000520630 GPHNQ9NQX3 736 aaPredicted RBP9.47□□□□□ -0.89
CSMD1-209ENST00000520630 IL17RBQ9NRM6 502 aa9.47□□□□□ -0.89
CSMD1-209ENST00000520630 CTNNA3Q9UI47 895 aa9.47□□□□□ -0.89
CSMD1-209ENST00000520630 LOC102724159A0A0B4J2E5 919 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 PRR23AA6NEV1 266 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 H0Y858 1186 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 NKRFO15226 690 aaKnown RBP eCLIP9.46□□□□□ -0.9
CSMD1-209ENST00000520630 NMT2O60551 498 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 EYA4O95677 639 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 ICAM1P05362 532 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 ARP10275 920 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 ATP5JP18859 108 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 AVPR2P30518 371 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms