RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 EPB41L4AQ9HCS5 686 aaPredicted RBP6.07□□□□□ -1.44
SQLE-204ENST00000520493 BTG4Q9NY30 223 aa6.07□□□□□ -1.44
SQLE-204ENST00000520493 MARCH2Q9P0N8 246 aa6.07□□□□□ -1.44
SQLE-204ENST00000520493 SRRDQ9UH36 339 aa6.07□□□□□ -1.44
SQLE-204ENST00000520493 MEFVO15553 781 aaPredicted RBP6.06□□□□□ -1.44
SQLE-204ENST00000520493 ITGAVP06756 1048 aa6.06□□□□□ -1.44
SQLE-204ENST00000520493 ECI1P42126 302 aa6.06□□□□□ -1.44
SQLE-204ENST00000520493 KCNJ6P48051 423 aa6.06□□□□□ -1.44
SQLE-204ENST00000520493 LIMS1P48059 325 aa6.06□□□□□ -1.44
SQLE-204ENST00000520493 GTF2A2P52657 109 aa6.06□□□□□ -1.44
SQLE-204ENST00000520493 RPL11P62913 178 aaKnown RBP6.06□□□□□ -1.44
SQLE-204ENST00000520493 HHIPL2Q6UWX4 724 aa6.06□□□□□ -1.44
SQLE-204ENST00000520493 LINC01356Q8N9X3 169 aa6.06□□□□□ -1.44
SQLE-204ENST00000520493 SLC16A11Q8NCK7 471 aa6.06□□□□□ -1.44
SQLE-204ENST00000520493 DIO2Q92813 273 aa6.06□□□□□ -1.44
SQLE-204ENST00000520493 RXFP1Q9HBX9 757 aa6.06□□□□□ -1.44
SQLE-204ENST00000520493 PMF1-BGLAPU3KQ54 211 aa6.06□□□□□ -1.44
SQLE-204ENST00000520493 FSHBP01225 129 aa6.05□□□□□ -1.44
SQLE-204ENST00000520493 NTRK1P04629 796 aa6.05□□□□□ -1.44
SQLE-204ENST00000520493 ASGR2P07307 311 aa6.05□□□□□ -1.44
SQLE-204ENST00000520493 FBLN1P23142 703 aa6.05□□□□□ -1.44
SQLE-204ENST00000520493 FOXO4P98177 505 aa6.05□□□□□ -1.44
SQLE-204ENST00000520493 CAP1Q01518 475 aa6.05□□□□□ -1.44
SQLE-204ENST00000520493 FAM177A1Q8N128 213 aaPredicted RBP6.05□□□□□ -1.44
SQLE-204ENST00000520493 NPLOC4Q8TAT6 608 aa6.05□□□□□ -1.44
SQLE-204ENST00000520493 FRS2Q8WU20 508 aa6.05□□□□□ -1.44
SQLE-204ENST00000520493 DNAJC2Q99543 621 aaKnown RBP6.05□□□□□ -1.44
SQLE-204ENST00000520493 LGR4Q9BXB1 951 aa6.05□□□□□ -1.44
SQLE-204ENST00000520493 TIMM13Q9Y5L4 95 aaPredicted RBP6.05□□□□□ -1.44
SQLE-204ENST00000520493 C22orf46C9J442 243 aa6.04□□□□□ -1.44
SQLE-204ENST00000520493 GJB6O95452 261 aa6.04□□□□□ -1.44
SQLE-204ENST00000520493 PMLP29590 882 aa6.04□□□□□ -1.44
SQLE-204ENST00000520493 ACBD5Q5T8D3 534 aaPredicted RBP6.04□□□□□ -1.44
SQLE-204ENST00000520493 MROH9Q5TGP6 573 aa6.04□□□□□ -1.44
SQLE-204ENST00000520493 MBLAC2Q68D91 279 aa6.04□□□□□ -1.44
SQLE-204ENST00000520493 CKAP2LQ8IYA6 745 aa6.04□□□□□ -1.44
SQLE-204ENST00000520493 MKL1Q969V6 931 aa6.04□□□□□ -1.44
SQLE-204ENST00000520493 FBLN5Q9UBX5 448 aa6.04□□□□□ -1.44
SQLE-204ENST00000520493 COA3Q9Y2R0 106 aaPredicted RBP6.04□□□□□ -1.44
SQLE-204ENST00000520493 PPP1R11O60927 126 aaPredicted RBP6.03□□□□□ -1.44
SQLE-204ENST00000520493 SCG5P05408 212 aa6.03□□□□□ -1.44
SQLE-204ENST00000520493 ATF2P15336 505 aa6.03□□□□□ -1.44
SQLE-204ENST00000520493 MRM1Q6IN84 353 aaKnown RBP6.03□□□□□ -1.44
SQLE-204ENST00000520493 ANKS3Q6ZW76 656 aa6.03□□□□□ -1.44
SQLE-204ENST00000520493 B3GNT8Q7Z7M8 397 aa6.03□□□□□ -1.44
SQLE-204ENST00000520493 TEX2Q8IWB9 1127 aa6.03□□□□□ -1.44
SQLE-204ENST00000520493 PPIL6Q8IXY8 311 aa6.03□□□□□ -1.44
SQLE-204ENST00000520493 HNRNPLLQ8WVV9 542 aaKnown RBP6.03□□□□□ -1.44
SQLE-204ENST00000520493 CPA5Q8WXQ8 436 aa6.03□□□□□ -1.44
SQLE-204ENST00000520493 SEC14L1Q92503 715 aa6.03□□□□□ -1.44
SQLE-204ENST00000520493 TRMT2BQ96GJ1 504 aaKnown RBP6.03□□□□□ -1.44
SQLE-204ENST00000520493 PCDH18Q9HCL0 1135 aa6.03□□□□□ -1.44
SQLE-204ENST00000520493 LUC7LQ9NQ29 371 aaKnown RBP6.03□□□□□ -1.44
SQLE-204ENST00000520493 PALD1Q9ULE6 856 aa6.03□□□□□ -1.44
SQLE-204ENST00000520493 IQCA1LA6NCM1 817 aa6.02□□□□□ -1.45
SQLE-204ENST00000520493 TBX1O43435 398 aa6.02□□□□□ -1.45
SQLE-204ENST00000520493 TNFRSF1AP19438 455 aa6.02□□□□□ -1.45
SQLE-204ENST00000520493 LTBRP36941 435 aa6.02□□□□□ -1.45
SQLE-204ENST00000520493 CACNB2Q08289 660 aaPredicted RBP6.02□□□□□ -1.45
SQLE-204ENST00000520493 CHRNA2Q15822 529 aa6.02□□□□□ -1.45
SQLE-204ENST00000520493 NFE2L2Q16236 605 aa6.02□□□□□ -1.45
SQLE-204ENST00000520493 DDR2Q16832 855 aa6.02□□□□□ -1.45
SQLE-204ENST00000520493 INF2Q27J81 1249 aa6.02□□□□□ -1.45
SQLE-204ENST00000520493 SLC10A6Q3KNW5 377 aa6.02□□□□□ -1.45
SQLE-204ENST00000520493 CCDC144BQ3MJ40 725 aa6.02□□□□□ -1.45
SQLE-204ENST00000520493 ZC3H18Q86VM9 953 aaKnown RBP6.02□□□□□ -1.45
SQLE-204ENST00000520493 RIOX2Q8IUF8 465 aa6.02□□□□□ -1.45
SQLE-204ENST00000520493 PLEKHO2Q8TD55 490 aa6.02□□□□□ -1.45
SQLE-204ENST00000520493 MICAL1Q8TDZ2 1067 aa6.02□□□□□ -1.45
SQLE-204ENST00000520493 DDX11Q96FC9 970 aa6.02□□□□□ -1.45
SQLE-204ENST00000520493 TMEM169Q96HH4 297 aa6.02□□□□□ -1.45
SQLE-204ENST00000520493 CHAMP1Q96JM3 812 aa6.02□□□□□ -1.45
SQLE-204ENST00000520493 TRIM55Q9BYV6 548 aa6.02□□□□□ -1.45
SQLE-204ENST00000520493 OSBPL2Q9H1P3 480 aa6.02□□□□□ -1.45
SQLE-204ENST00000520493 BCAS3Q9H6U6 928 aa6.02□□□□□ -1.45
SQLE-204ENST00000520493 ST7Q9NRC1 585 aa6.02□□□□□ -1.45
SQLE-204ENST00000520493 SMARCA5O60264 1052 aaPredicted RBP6.01□□□□□ -1.45
SQLE-204ENST00000520493 CYP2C8P10632 490 aa6.01□□□□□ -1.45
SQLE-204ENST00000520493 MC3RP41968 323 aa6.01□□□□□ -1.45
SQLE-204ENST00000520493 SLC6A11P48066 632 aa6.01□□□□□ -1.45
SQLE-204ENST00000520493 HMGA2P52926 109 aa6.01□□□□□ -1.45
SQLE-204ENST00000520493 GFRA1P56159 465 aa6.01□□□□□ -1.45
SQLE-204ENST00000520493 ETV3LQ6ZN32 361 aa6.01□□□□□ -1.45
SQLE-204ENST00000520493 CEP68Q76N32 757 aa6.01□□□□□ -1.45
SQLE-204ENST00000520493 LRP10Q7Z4F1 713 aa6.01□□□□□ -1.45
SQLE-204ENST00000520493 SMARCC2Q8TAQ2 1214 aa6.01□□□□□ -1.45
SQLE-204ENST00000520493 FNIP1Q8TF40 1166 aa6.01□□□□□ -1.45
SQLE-204ENST00000520493 KCTD13Q8WZ19 329 aa6.01□□□□□ -1.45
SQLE-204ENST00000520493 DPF3Q92784 378 aa6.01□□□□□ -1.45
SQLE-204ENST00000520493 YIPF4Q9BSR8 244 aa6.01□□□□□ -1.45
SQLE-204ENST00000520493 MENTQ9BUN1 341 aa6.01□□□□□ -1.45
SQLE-204ENST00000520493 PLA2G2DQ9UNK4 145 aa6.01□□□□□ -1.45
SQLE-204ENST00000520493 TMA7Q9Y2S6 64 aaKnown RBP6.01□□□□□ -1.45
SQLE-204ENST00000520493 TLDC2A0PJX2 215 aa6□□□□□ -1.45
SQLE-204ENST00000520493 U2SURPO15042 1029 aaKnown RBP6□□□□□ -1.45
SQLE-204ENST00000520493 FPR2P25090 351 aa6□□□□□ -1.45
SQLE-204ENST00000520493 KCNC1P48547 511 aa6□□□□□ -1.45
SQLE-204ENST00000520493 PPP2R2AP63151 447 aa6□□□□□ -1.45
SQLE-204ENST00000520493 HSP90AA2PQ14568 343 aaPredicted RBP6□□□□□ -1.45
SQLE-204ENST00000520493 RTP5Q14D33 572 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms