RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 PPP2R2CQ9Y2T4 447 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 TSPOAP1O95153 1857 aa13.16□□□□□ -0.3
ERGIC1-208ENST00000520399 APOEP02649 317 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 ALAS1P13196 640 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 STAT1P42224 750 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 TMTC4Q5T4D3 741 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 NUB1Q9Y5A7 615 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 ABCC3O15438 1527 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 H0YCG3 227 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 GSTA1P08263 222 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 GSTA2P09210 222 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 SLFN13Q68D06 897 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 HACE1Q8IYU2 909 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 BSDC1Q9NW68 430 aaPredicted RBP13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 TTLL3Q9Y4R7 772 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 CSADQ9Y600 493 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 GOLGA8QA0A0J9YX86 632 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 GOLGA8OA6NCC3 632 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 GOLGA8NF8WBI6 632 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 RNF40O75150 1001 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 DCAF15Q66K64 600 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 CCDC80Q76M96 950 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 KRT26Q7Z3Y9 468 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 ZNF589Q86UQ0 364 aaPredicted RBP13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 GAS2L3Q86XJ1 694 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 CCDC68Q9H2F9 335 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 MAP3K4Q9Y6R4 1608 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 HMGB3O15347 200 aaKnown RBP13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 BAG6P46379 1132 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 LIG4P49917 911 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 LRRC8AQ8IWT6 810 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 MLXIPQ9HAP2 919 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 HYOU1Q9Y4L1 999 aa13.15□□□□□ -0.3
ERGIC1-208ENST00000520399 PRAMEF22A3QJZ6 481 aa13.15□□□□□ -0.31
ERGIC1-208ENST00000520399 PTGDRQ13258 359 aa13.15□□□□□ -0.31
ERGIC1-208ENST00000520399 ABCB5Q2M3G0 1257 aa13.15□□□□□ -0.31
ERGIC1-208ENST00000520399 PLA2G4DQ86XP0 818 aa13.15□□□□□ -0.31
ERGIC1-208ENST00000520399 APLFQ8IW19 511 aaPredicted RBP13.15□□□□□ -0.31
ERGIC1-208ENST00000520399 VPS37BQ9H9H4 285 aa13.15□□□□□ -0.31
ERGIC1-208ENST00000520399 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.15□□□□□ -0.31
ERGIC1-208ENST00000520399 WDR17Q8IZU2 1322 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 ARHGAP4P98171 946 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 ASPRV1Q53RT3 343 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 FBXO41Q8TF61 875 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 POMGNT1Q8WZA1 660 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 GLG1Q92896 1179 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 DRC3Q9H069 523 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 MIS12Q9H081 205 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 IFT88Q13099 833 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 ERFEQ4G0M1 354 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 XKR9Q5GH70 373 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 SND1Q7KZF4 910 aaKnown RBP eCLIP13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 KIAA0825Q8IV33 1275 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 CUEDC2Q9H467 287 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 IPO11Q9UI26 975 aaKnown RBP13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 ADAM21Q9UKJ8 722 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 PLA2R1Q13018 1463 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 TRPM1Q7Z4N2 1603 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 PHBP35232 272 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 CLCN6P51797 869 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 ZBTB8OSQ8IWT0 167 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 NME8Q8N427 588 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 RNF26Q9BY78 433 aaPredicted RBP13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 FANCLQ9NW38 375 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 HEG1Q9ULI3 1381 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 PTCH1Q13635 1447 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 CCDC151A5D8V7 595 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 TMEM232C9JQI7 657 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 ABCD1P33897 745 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 TRAPPC10P48553 1259 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 DENND2CQ68D51 928 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 NLRP7Q8WX94 980 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 SCYL1Q96KG9 808 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 COL4A3BPQ9Y5P4 624 aa13.14□□□□□ -0.31
ERGIC1-208ENST00000520399 CPSF1Q10570 1443 aaKnown RBP13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 GFAPP14136 432 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 ZNF827Q17R98 1081 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 FBXO38Q6PIJ6 1188 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 NSUN7Q8NE18 718 aaKnown RBP13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 CNKSR1Q969H4 720 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 SLC39A2Q9NP94 309 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 RAB20Q9NX57 234 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 ARMCX3Q9UH62 379 aaPredicted RBP13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 ETF1P62495 437 aaKnown RBP13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 NAIF1Q69YI7 327 aaPredicted RBP13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 ZNF449Q6P9G9 518 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 ZNF280CQ8ND82 737 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 CEP19Q96LK0 163 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 TBC1D8O95759 1140 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 PDE6CP51160 858 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 LAMB3Q13751 1172 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 SLC39A14Q15043 492 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 GRK7Q8WTQ7 553 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 BEGAINQ9BUH8 593 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 METTL14Q9HCE5 456 aaKnown RBP13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 GIMAP4Q9NUV9 329 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 SLC5A4Q9NY91 659 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 ZBTB1Q9Y2K1 713 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 ENO4A6NNW6 628 aa13.13□□□□□ -0.31
ERGIC1-208ENST00000520399 TNNC2P02585 160 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms