RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 TCP11L1Q9NUJ3 509 aa10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 ISY1Q9ULR0 285 aaKnown RBP10.94□□□□□ -0.66
CTNNA1-221ENST00000520339 CTAGE5O15320 804 aa10.93□□□□□ -0.66
CTNNA1-221ENST00000520339 PQBP1O60828 265 aaKnown RBP10.93□□□□□ -0.66
CTNNA1-221ENST00000520339 IGHDP01880 384 aa10.93□□□□□ -0.66
CTNNA1-221ENST00000520339 CLTBP09497 229 aa10.93□□□□□ -0.66
CTNNA1-221ENST00000520339 TOP1P11387 765 aaKnown RBP10.93□□□□□ -0.66
CTNNA1-221ENST00000520339 CDK7P50613 346 aa10.93□□□□□ -0.66
CTNNA1-221ENST00000520339 GJA9P57773 515 aa10.93□□□□□ -0.66
CTNNA1-221ENST00000520339 IKQ13123 557 aaPredicted RBP10.93□□□□□ -0.66
CTNNA1-221ENST00000520339 CCDC144BQ3MJ40 725 aa10.93□□□□□ -0.66
CTNNA1-221ENST00000520339 TTBK2Q6IQ55 1244 aa10.93□□□□□ -0.66
CTNNA1-221ENST00000520339 CCDC174Q6PII3 467 aa10.93□□□□□ -0.66
CTNNA1-221ENST00000520339 BTNL9Q6UXG8 535 aa10.93□□□□□ -0.66
CTNNA1-221ENST00000520339 PLEKHM2Q8IWE5 1019 aa10.93□□□□□ -0.66
CTNNA1-221ENST00000520339 KCTD17Q8N5Z5 321 aa10.93□□□□□ -0.66
CTNNA1-221ENST00000520339 NUP133Q8WUM0 1156 aa10.93□□□□□ -0.66
CTNNA1-221ENST00000520339 ZNF592Q92610 1267 aa10.93□□□□□ -0.66
CTNNA1-221ENST00000520339 TMEM47Q9BQJ4 181 aa10.93□□□□□ -0.66
CTNNA1-221ENST00000520339 VRTNQ9H8Y1 702 aa10.93□□□□□ -0.66
CTNNA1-221ENST00000520339 STARD7Q9NQZ5 370 aa10.93□□□□□ -0.66
CTNNA1-221ENST00000520339 STXBP5LQ9Y2K9 1186 aa10.93□□□□□ -0.66
CTNNA1-221ENST00000520339 GREB1LQ9C091 1923 aaPredicted RBP10.93□□□□□ -0.66
CTNNA1-221ENST00000520339 ASTN1O14525 1302 aa10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 ELP1O95163 1332 aa10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 ZMYM6O95789 1325 aa10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 CCDC171Q6TFL3 1326 aa10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 ALAS1P13196 640 aa10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 SDSP20132 328 aa10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 EPHB4P54760 987 aa10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 MCCD1P59942 119 aaPredicted RBP10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 HAND2P61296 217 aa10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 NUCB1Q02818 461 aa10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 FAAP100Q0VG06 881 aa10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 MUM1L1Q5H9M0 696 aa10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 RRP12Q5JTH9 1297 aaKnown RBP10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 B4GALNT3Q6L9W6 998 aa10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 CHD1LQ86WJ1 897 aa10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 PCSK9Q8NBP7 692 aaKnown RBP10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 SLC17A8Q8NDX2 589 aa10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 BAP1Q92560 729 aa10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 RANBP17Q9H2T7 1088 aaKnown RBP10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 OSBPL3Q9H4L5 887 aa10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 SPC25Q9HBM1 224 aa10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 TMEM39AQ9NV64 488 aa10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 CYP39A1Q9NYL5 469 aa10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 MTMR7Q9Y216 660 aa10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 FCF1Q9Y324 198 aaKnown RBP10.92□□□□□ -0.66
CTNNA1-221ENST00000520339 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 ASB14A6NK59 587 aa10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 DCDC2CA8MYV0 355 aa10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 ICAM1P05362 532 aa10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 ASGR1P07306 291 aa10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 C6orf222P0C671 652 aaPredicted RBP10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 PCP11498 1178 aaKnown RBP10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 SLC16A2P36021 539 aa10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 TNFAIP2Q03169 654 aa10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 AGERQ15109 404 aa10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 CCDC96Q2M329 555 aa10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 GNASQ5JWF2 1037 aa10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 AKNAD1Q5T1N1 836 aa10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 SYDE2Q5VT97 1194 aa10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 TBC1D10CQ8IV04 446 aa10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 FAM174AQ8TBP5 190 aa10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 MORC4Q8TE76 937 aa10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 RILPL2Q969X0 211 aa10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 GLT1D1Q96MS3 346 aa10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 TTC14Q96N46 770 aa10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 TOMM22Q9NS69 142 aa10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 TBX21Q9UL17 535 aa10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 CCPG1Q9ULG6 757 aa10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 GNEQ9Y223 722 aaKnown RBP10.91□□□□□ -0.66
CTNNA1-221ENST00000520339 ARVCFO00192 962 aa10.9□□□□□ -0.66
CTNNA1-221ENST00000520339 SNHG28P0DPA3 235 aa10.9□□□□□ -0.66
CTNNA1-221ENST00000520339 PDHBP11177 359 aa10.9□□□□□ -0.66
CTNNA1-221ENST00000520339 RAG1P15918 1043 aa10.9□□□□□ -0.66
CTNNA1-221ENST00000520339 LINC01559Q495D7 138 aa10.9□□□□□ -0.66
CTNNA1-221ENST00000520339 IQSEC1Q6DN90 963 aa10.9□□□□□ -0.66
CTNNA1-221ENST00000520339 TAPT1Q6NXT6 567 aa10.9□□□□□ -0.66
CTNNA1-221ENST00000520339 RNF135Q8IUD6 432 aa10.9□□□□□ -0.66
CTNNA1-221ENST00000520339 EXOC6Q8TAG9 804 aa10.9□□□□□ -0.66
CTNNA1-221ENST00000520339 GUCD1Q96NT3 240 aa10.9□□□□□ -0.66
CTNNA1-221ENST00000520339 PURBQ96QR8 312 aaKnown RBP10.9□□□□□ -0.66
CTNNA1-221ENST00000520339 PDGFCQ9NRA1 345 aa10.9□□□□□ -0.66
CTNNA1-221ENST00000520339 DDX49Q9Y6V7 483 aaKnown RBP10.9□□□□□ -0.66
CTNNA1-221ENST00000520339 FRMPD2Q68DX3 1309 aaPredicted RBP10.89□□□□□ -0.67
CTNNA1-221ENST00000520339 A0A0U1RQG5 324 aaPredicted RBP10.89□□□□□ -0.67
CTNNA1-221ENST00000520339 ATG7O95352 703 aa10.89□□□□□ -0.67
CTNNA1-221ENST00000520339 TIMP1P01033 207 aa10.89□□□□□ -0.67
CTNNA1-221ENST00000520339 SMPD1P17405 629 aa10.89□□□□□ -0.67
CTNNA1-221ENST00000520339 PTGS1P23219 599 aa10.89□□□□□ -0.67
CTNNA1-221ENST00000520339 MFAP1P55081 439 aaKnown RBP10.89□□□□□ -0.67
CTNNA1-221ENST00000520339 SMAD3P84022 425 aaKnown RBP10.89□□□□□ -0.67
CTNNA1-221ENST00000520339 BEX3Q00994 111 aa10.89□□□□□ -0.67
CTNNA1-221ENST00000520339 ZNF543Q08ER8 600 aa10.89□□□□□ -0.67
CTNNA1-221ENST00000520339 BAATQ14032 418 aaPredicted RBP10.89□□□□□ -0.67
CTNNA1-221ENST00000520339 TMEM63BQ5T3F8 832 aa10.89□□□□□ -0.67
CTNNA1-221ENST00000520339 NSMFQ6X4W1 530 aa10.89□□□□□ -0.67
CTNNA1-221ENST00000520339 MFSD6Q6ZSS7 791 aa10.89□□□□□ -0.67
CTNNA1-221ENST00000520339 NOL8Q76FK4 1167 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms