RNA–Protein interactions for RNA: ENST00000520022.2

ARFGAP1-213, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 4

Gene ARFGAP1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-213ENST00000520022 POLR2MP0CAP2 368 aa20.31■□□□□ 0.84
ARFGAP1-213ENST00000520022 MCM5P33992 734 aa20.31■□□□□ 0.84
ARFGAP1-213ENST00000520022 NECTIN1Q15223 517 aa20.31■□□□□ 0.84
ARFGAP1-213ENST00000520022 PSRC1Q6PGN9 363 aaPredicted RBP20.31■□□□□ 0.84
ARFGAP1-213ENST00000520022 NFXL1Q6ZNB6 911 aa20.31■□□□□ 0.84
ARFGAP1-213ENST00000520022 OTOP2Q7RTS6 562 aa20.31■□□□□ 0.84
ARFGAP1-213ENST00000520022 IL31RAQ8NI17 732 aa20.31■□□□□ 0.84
ARFGAP1-213ENST00000520022 MAP3K20Q9NYL2 800 aaKnown RBP20.31■□□□□ 0.84
ARFGAP1-213ENST00000520022 CXXC1Q9P0U4 656 aaPredicted RBP20.31■□□□□ 0.84
ARFGAP1-213ENST00000520022 SH2B2O14492 632 aaPredicted RBP20.3■□□□□ 0.84
ARFGAP1-213ENST00000520022 RGS20O76081 388 aa20.3■□□□□ 0.84
ARFGAP1-213ENST00000520022 DNAJB2P25686 324 aa20.3■□□□□ 0.84
ARFGAP1-213ENST00000520022 TRAF1Q13077 416 aa20.3■□□□□ 0.84
ARFGAP1-213ENST00000520022 PGM5Q15124 567 aa20.3■□□□□ 0.84
ARFGAP1-213ENST00000520022 RASIP1Q5U651 963 aa20.3■□□□□ 0.84
ARFGAP1-213ENST00000520022 NFRKBQ6P4R8 1299 aa20.3■□□□□ 0.84
ARFGAP1-213ENST00000520022 RAB11FIP4Q86YS3 637 aa20.3■□□□□ 0.84
ARFGAP1-213ENST00000520022 CTCFLQ8NI51 663 aaPredicted RBP20.3■□□□□ 0.84
ARFGAP1-213ENST00000520022 MYLIPQ8WY64 445 aa20.3■□□□□ 0.84
ARFGAP1-213ENST00000520022 LRRC2Q9BYS8 371 aa20.3■□□□□ 0.84
ARFGAP1-213ENST00000520022 SCN10AQ9Y5Y9 1956 aa20.29■□□□□ 0.84
ARFGAP1-213ENST00000520022 CCDC69A6NI79 296 aa20.29■□□□□ 0.84
ARFGAP1-213ENST00000520022 DDAH1O94760 285 aa20.29■□□□□ 0.84
ARFGAP1-213ENST00000520022 RXRAP19793 462 aa20.29■□□□□ 0.84
ARFGAP1-213ENST00000520022 CASTP20810 708 aaKnown RBP20.29■□□□□ 0.84
ARFGAP1-213ENST00000520022 PBX2P40425 430 aa20.29■□□□□ 0.84
ARFGAP1-213ENST00000520022 BMP2KLQ5H9B9 411 aa20.29■□□□□ 0.84
ARFGAP1-213ENST00000520022 VSIG10LQ86VR7 867 aa20.29■□□□□ 0.84
ARFGAP1-213ENST00000520022 DHX37Q8IY37 1157 aaKnown RBP20.29■□□□□ 0.84
ARFGAP1-213ENST00000520022 CMTR1Q8N1G2 835 aaKnown RBP20.29■□□□□ 0.84
ARFGAP1-213ENST00000520022 SAMD3Q8N6K7 520 aa20.29■□□□□ 0.84
ARFGAP1-213ENST00000520022 HERVK_113Q902F9 699 aa20.29■□□□□ 0.84
ARFGAP1-213ENST00000520022 KIAA1217Q5T5P2 1943 aa20.29■□□□□ 0.84
ARFGAP1-213ENST00000520022 PLEKHA8P1O95397 391 aa20.28■□□□□ 0.84
ARFGAP1-213ENST00000520022 KIF5BP33176 963 aa20.28■□□□□ 0.84
ARFGAP1-213ENST00000520022 DEFB128Q7Z7B8 93 aa20.28■□□□□ 0.84
ARFGAP1-213ENST00000520022 RPUSD2Q8IZ73 545 aaKnown RBP20.28■□□□□ 0.84
ARFGAP1-213ENST00000520022 KAT2BQ92831 832 aa20.28■□□□□ 0.84
ARFGAP1-213ENST00000520022 VWCEQ96DN2 955 aa20.28■□□□□ 0.84
ARFGAP1-213ENST00000520022 RRP36Q96EU6 259 aaKnown RBP20.28■□□□□ 0.84
ARFGAP1-213ENST00000520022 TMEM87BQ96K49 555 aa20.28■□□□□ 0.84
ARFGAP1-213ENST00000520022 MAP3K14Q99558 947 aa20.28■□□□□ 0.84
ARFGAP1-213ENST00000520022 CCND2P30279 289 aa20.27■□□□□ 0.84
ARFGAP1-213ENST00000520022 PTPN11Q06124 597 aaPredicted RBP20.27■□□□□ 0.84
ARFGAP1-213ENST00000520022 LAMC2Q13753 1193 aa20.27■□□□□ 0.84
ARFGAP1-213ENST00000520022 GRIN2CQ14957 1233 aa20.27■□□□□ 0.84
ARFGAP1-213ENST00000520022 DGKDQ16760 1214 aa20.27■□□□□ 0.84
ARFGAP1-213ENST00000520022 TMTC2Q8N394 836 aa20.27■□□□□ 0.84
ARFGAP1-213ENST00000520022 SRBD1Q8N5C6 995 aaKnown RBP20.27■□□□□ 0.84
ARFGAP1-213ENST00000520022 GPKOWQ92917 476 aaPredicted RBP eCLIP20.27■□□□□ 0.84
ARFGAP1-213ENST00000520022 TIFAQ96CG3 184 aa20.27■□□□□ 0.84
ARFGAP1-213ENST00000520022 MTA3Q9BTC8 594 aa20.27■□□□□ 0.84
ARFGAP1-213ENST00000520022 PBX4Q9BYU1 374 aa20.27■□□□□ 0.84
ARFGAP1-213ENST00000520022 NOD1Q9Y239 953 aa20.27■□□□□ 0.84
ARFGAP1-213ENST00000520022 SP2Q02086 613 aa20.26■□□□□ 0.83
ARFGAP1-213ENST00000520022 PTGISQ16647 500 aa20.26■□□□□ 0.83
ARFGAP1-213ENST00000520022 CCDC82Q8N4S0 544 aa20.26■□□□□ 0.83
ARFGAP1-213ENST00000520022 ALG1Q9BT22 464 aa20.26■□□□□ 0.83
ARFGAP1-213ENST00000520022 SPZ1Q9BXG8 430 aa20.26■□□□□ 0.83
ARFGAP1-213ENST00000520022 ZNF576Q9H609 170 aa20.26■□□□□ 0.83
ARFGAP1-213ENST00000520022 hCG_1642624A0A1W2PR95 340 aa20.25■□□□□ 0.83
ARFGAP1-213ENST00000520022 GGPS1O95749 300 aa20.25■□□□□ 0.83
ARFGAP1-213ENST00000520022 ZNF286BP0CG31 522 aa20.25■□□□□ 0.83
ARFGAP1-213ENST00000520022 LIFRP42702 1097 aa20.25■□□□□ 0.83
ARFGAP1-213ENST00000520022 CELF3Q5SZQ8 465 aaKnown RBP20.25■□□□□ 0.83
ARFGAP1-213ENST00000520022 MYSM1Q5VVJ2 828 aa20.25■□□□□ 0.83
ARFGAP1-213ENST00000520022 GDF6Q6KF10 455 aaPredicted RBP20.25■□□□□ 0.83
ARFGAP1-213ENST00000520022 USP17L6PQ6QN14 398 aa20.25■□□□□ 0.83
ARFGAP1-213ENST00000520022 RETREG2Q8NC44 543 aa20.25■□□□□ 0.83
ARFGAP1-213ENST00000520022 PPTC7Q8NI37 304 aa20.25■□□□□ 0.83
ARFGAP1-213ENST00000520022 EMID1Q96A84 441 aaPredicted RBP20.25■□□□□ 0.83
ARFGAP1-213ENST00000520022 LZTS2Q9BRK4 669 aa20.25■□□□□ 0.83
ARFGAP1-213ENST00000520022 MTIF3Q9H2K0 278 aaKnown RBP20.25■□□□□ 0.83
ARFGAP1-213ENST00000520022 BCAS3Q9H6U6 928 aa20.25■□□□□ 0.83
ARFGAP1-213ENST00000520022 RTEL1Q9NZ71 1219 aa20.25■□□□□ 0.83
ARFGAP1-213ENST00000520022 SEC63Q9UGP8 760 aaKnown RBP20.25■□□□□ 0.83
ARFGAP1-213ENST00000520022 SLC12A7Q9Y666 1083 aa20.25■□□□□ 0.83
ARFGAP1-213ENST00000520022 MYH7BA7E2Y1 1941 aa20.25■□□□□ 0.83
ARFGAP1-213ENST00000520022 TMEM265A0A087WTH1 108 aa20.24■□□□□ 0.83
ARFGAP1-213ENST00000520022 ZBBXA8MT70 800 aa20.24■□□□□ 0.83
ARFGAP1-213ENST00000520022 SMARCA1P28370 1054 aa20.24■□□□□ 0.83
ARFGAP1-213ENST00000520022 PSEN2P49810 448 aa20.24■□□□□ 0.83
ARFGAP1-213ENST00000520022 GNAQP50148 359 aa20.24■□□□□ 0.83
ARFGAP1-213ENST00000520022 KCNV1Q6PIU1 500 aa20.24■□□□□ 0.83
ARFGAP1-213ENST00000520022 SMARCC2Q8TAQ2 1214 aa20.24■□□□□ 0.83
ARFGAP1-213ENST00000520022 SPATA33Q96N06 139 aa20.24■□□□□ 0.83
ARFGAP1-213ENST00000520022 HDAC6Q9UBN7 1215 aa20.24■□□□□ 0.83
ARFGAP1-213ENST00000520022 IQCF3P0C7M6 154 aa20.23■□□□□ 0.83
ARFGAP1-213ENST00000520022 FOSL2P15408 326 aa20.23■□□□□ 0.83
ARFGAP1-213ENST00000520022 UBA1P22314 1058 aaKnown RBP20.23■□□□□ 0.83
ARFGAP1-213ENST00000520022 RABGGTBP53611 331 aa20.23■□□□□ 0.83
ARFGAP1-213ENST00000520022 MRPS9P82933 396 aaKnown RBP20.23■□□□□ 0.83
ARFGAP1-213ENST00000520022 MFSD10Q14728 455 aa20.23■□□□□ 0.83
ARFGAP1-213ENST00000520022 HSDL1Q3SXM5 330 aa20.23■□□□□ 0.83
ARFGAP1-213ENST00000520022 RNF20Q5VTR2 975 aa20.23■□□□□ 0.83
ARFGAP1-213ENST00000520022 C7orf31Q8N865 590 aa20.23■□□□□ 0.83
ARFGAP1-213ENST00000520022 MAFAQ8NHW3 353 aaPredicted RBP20.23■□□□□ 0.83
ARFGAP1-213ENST00000520022 TCEANC2Q96MN5 208 aa20.23■□□□□ 0.83
ARFGAP1-213ENST00000520022 NEK1Q96PY6 1258 aa20.23■□□□□ 0.83
ARFGAP1-213ENST00000520022 CTAGE1Q96RT6 745 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms