RNA–Protein interactions for RNA: ENST00000519835.5

CPEB4-207, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-207ENST00000519835 RBM12Q9NTZ6 932 aaKnown RBP13.24□□□□□ -0.29
CPEB4-207ENST00000519835 MYH4Q9Y623 1939 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 TNRC6CQ9HCJ0 1690 aaKnown RBP13.23□□□□□ -0.29
CPEB4-207ENST00000519835 LOC102724428A0A0B4J2F2 783 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 USP17L8P0C7I0 530 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 GUCY2CP25092 1073 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 SIK1P57059 783 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 SLC35G1Q2M3R5 365 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 ASTE1Q2TB18 679 aaPredicted RBP13.23□□□□□ -0.29
CPEB4-207ENST00000519835 ERFEQ4G0M1 354 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 KLHDC7AQ5VTJ3 777 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 KDM7AQ6ZMT4 941 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.23□□□□□ -0.29
CPEB4-207ENST00000519835 C1orf131Q8NDD1 294 aaKnown RBP13.23□□□□□ -0.29
CPEB4-207ENST00000519835 SYN2Q92777 582 aaPredicted RBP13.23□□□□□ -0.29
CPEB4-207ENST00000519835 ZIM3Q96PE6 472 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 MMTAG2Q9BU76 263 aaKnown RBP13.23□□□□□ -0.29
CPEB4-207ENST00000519835 ANKRD2Q9GZV1 360 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 RIC8AQ9NPQ8 531 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 COL24A1Q17RW2 1714 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 DDX60LQ5H9U9 1706 aaKnown RBP13.23□□□□□ -0.29
CPEB4-207ENST00000519835 INPP5BP32019 993 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 TECP42680 631 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 PSMD2Q13200 908 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 TMEM266Q2M3C6 531 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 SLC9C1Q4G0N8 1177 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 TDRD12Q587J7 1177 aaKnown RBP13.23□□□□□ -0.29
CPEB4-207ENST00000519835 CFAP58Q5T655 872 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 SOGA3Q5TF21 947 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 CD302Q8IX05 232 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 LARP4BQ92615 738 aaKnown RBP13.23□□□□□ -0.29
CPEB4-207ENST00000519835 CDK5RAP3Q96JB5 506 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 RAB34Q9BZG1 259 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 CEP72Q9P209 647 aa13.23□□□□□ -0.29
CPEB4-207ENST00000519835 ESYT2A0FGR8 921 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 WTIPA6NIX2 430 aaPredicted RBP13.22□□□□□ -0.29
CPEB4-207ENST00000519835 NDUFAB1O14561 156 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 NCK2O43639 380 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 CXCR5P32302 372 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 LRRC55Q6ZSA7 311 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 MICALCLQ6ZW33 695 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 WHAMMQ8TF30 809 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.22□□□□□ -0.293e-9■■■■■ 29
CPEB4-207ENST00000519835 ARL8AQ96BM9 186 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 MTMR8Q96EF0 704 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 PSMB7Q99436 277 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 ZNF287Q9HBT7 754 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 NHSQ6T4R5 1651 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 SMCO2A6NFE2 343 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 KLRF2D3W0D1 207 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 hCG_1984214I3L0E3 225 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 KIAA0754O94854 1291 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 HEXIM1O94992 359 aaKnown RBP13.22□□□□□ -0.29
CPEB4-207ENST00000519835 SMARCA1P28370 1054 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 SLC1A4P43007 532 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 LIG3P49916 1009 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 FXR2P51116 673 aaKnown RBP eCLIP13.22□□□□□ -0.29
CPEB4-207ENST00000519835 RASSF7Q02833 373 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 SKIDA1Q1XH10 827 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 EMC10Q5UCC4 262 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 MCTP2Q6DN12 878 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 C3orf67Q6ZVT6 689 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 ZNF444Q8N0Y2 327 aaPredicted RBP13.22□□□□□ -0.29
CPEB4-207ENST00000519835 ZNF713Q8N859 430 aaPredicted RBP13.22□□□□□ -0.29
CPEB4-207ENST00000519835 TMEM47Q9BQJ4 181 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 PAGR1Q9BTK6 254 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 BLOC1S4Q9NUP1 217 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 EHD2Q9NZN4 543 aa13.22□□□□□ -0.29
CPEB4-207ENST00000519835 SEC63Q9UGP8 760 aaKnown RBP13.22□□□□□ -0.29
CPEB4-207ENST00000519835 USP17L3A6NCW0 530 aa13.21□□□□□ -0.29
CPEB4-207ENST00000519835 USP17L4A6NCW7 530 aa13.21□□□□□ -0.29
CPEB4-207ENST00000519835 MYMKA6NI61 221 aa13.21□□□□□ -0.29
CPEB4-207ENST00000519835 SRRM3A6NNA2 597 aaPredicted RBP13.21□□□□□ -0.29
CPEB4-207ENST00000519835 NKRFO15226 690 aaKnown RBP eCLIP13.21□□□□□ -0.29
CPEB4-207ENST00000519835 SERPING1P05155 500 aa13.21□□□□□ -0.29
CPEB4-207ENST00000519835 KLRK1P26718 216 aa13.21□□□□□ -0.29
CPEB4-207ENST00000519835 NAP1L1P55209 391 aaKnown RBP13.21□□□□□ -0.29
CPEB4-207ENST00000519835 GFPT1Q06210 699 aaPredicted RBP13.21□□□□□ -0.29
CPEB4-207ENST00000519835 GRB10Q13322 594 aa13.21□□□□□ -0.29
CPEB4-207ENST00000519835 PDCLQ13371 301 aa13.21□□□□□ -0.29
CPEB4-207ENST00000519835 SFMBT2Q5VUG0 894 aa13.21□□□□□ -0.29
CPEB4-207ENST00000519835 HGSNATQ68CP4 663 aa13.21□□□□□ -0.29
CPEB4-207ENST00000519835 USP17L1Q7RTZ2 530 aa13.21□□□□□ -0.29
CPEB4-207ENST00000519835 REXO1Q8N1G1 1221 aaKnown RBP13.21□□□□□ -0.29
CPEB4-207ENST00000519835 CELF1Q92879 486 aaKnown RBP13.21□□□□□ -0.29
CPEB4-207ENST00000519835 CCDC43Q96MW1 224 aaKnown RBP13.21□□□□□ -0.29
CPEB4-207ENST00000519835 EHD4Q9H223 541 aa13.21□□□□□ -0.29
CPEB4-207ENST00000519835 SMARCAL1Q9NZC9 954 aa13.21□□□□□ -0.29
CPEB4-207ENST00000519835 SALL4Q9UJQ4 1053 aa13.21□□□□□ -0.29
CPEB4-207ENST00000519835 COL16A1Q07092 1604 aaPredicted RBP13.21□□□□□ -0.29
CPEB4-207ENST00000519835 ITPK1Q13572 414 aa13.2□□□□□ -0.3
CPEB4-207ENST00000519835 CALCRLQ16602 461 aa13.2□□□□□ -0.3
CPEB4-207ENST00000519835 SWT1Q5T5J6 900 aaKnown RBP13.2□□□□□ -0.3
CPEB4-207ENST00000519835 IQCKQ8N0W5 287 aa13.2□□□□□ -0.3
CPEB4-207ENST00000519835 TBCKQ8TEA7 893 aa13.2□□□□□ -0.3
CPEB4-207ENST00000519835 HPS3Q969F9 1004 aa13.2□□□□□ -0.3
CPEB4-207ENST00000519835 CEP89Q96ST8 783 aa13.2□□□□□ -0.3
CPEB4-207ENST00000519835 HINFPQ9BQA5 517 aa13.2□□□□□ -0.3
CPEB4-207ENST00000519835 CDCA7Q9BWT1 371 aaPredicted RBP13.2□□□□□ -0.3
CPEB4-207ENST00000519835 TANGO6Q9C0B7 1094 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms