RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 LGALS16A8MUM7 142 aa9.41□□□□□ -0.9
HMGB4-203ENST00000519684 TBX3O15119 743 aa9.41□□□□□ -0.9
HMGB4-203ENST00000519684 FGFR1OPO95684 399 aaKnown RBP9.41□□□□□ -0.9
HMGB4-203ENST00000519684 FCER1AP12319 257 aa9.41□□□□□ -0.9
HMGB4-203ENST00000519684 CASP14P31944 242 aa9.41□□□□□ -0.9
HMGB4-203ENST00000519684 ZNF76P36508 570 aa9.41□□□□□ -0.9
HMGB4-203ENST00000519684 SREBF1P36956 1147 aa9.41□□□□□ -0.9
HMGB4-203ENST00000519684 MMP14P50281 582 aa9.41□□□□□ -0.9
HMGB4-203ENST00000519684 PMS1P54277 932 aaKnown RBP9.41□□□□□ -0.9
HMGB4-203ENST00000519684 CXCL9Q07325 125 aa9.41□□□□□ -0.9
HMGB4-203ENST00000519684 STK4Q13043 487 aa9.41□□□□□ -0.9
HMGB4-203ENST00000519684 PSMD2Q13200 908 aa9.41□□□□□ -0.9
HMGB4-203ENST00000519684 TNIP1Q15025 636 aa9.41□□□□□ -0.9
HMGB4-203ENST00000519684 HAUS3Q68CZ6 603 aa9.41□□□□□ -0.9
HMGB4-203ENST00000519684 SYT10Q6XYQ8 523 aa9.41□□□□□ -0.9
HMGB4-203ENST00000519684 ACER1Q8TDN7 264 aa9.41□□□□□ -0.9
HMGB4-203ENST00000519684 MBOAT7Q96N66 472 aa9.41□□□□□ -0.9
HMGB4-203ENST00000519684 EHMT1Q9H9B1 1298 aa9.41□□□□□ -0.9
HMGB4-203ENST00000519684 SLC39A2Q9NP94 309 aa9.41□□□□□ -0.9
HMGB4-203ENST00000519684 KCNMB3Q9NPA1 279 aa9.41□□□□□ -0.9
HMGB4-203ENST00000519684 GYPCP04921 128 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 SSBP05455 408 aaKnown RBP eCLIP9.4□□□□□ -0.9
HMGB4-203ENST00000519684 MTIF2P46199 727 aaKnown RBP9.4□□□□□ -0.9
HMGB4-203ENST00000519684 Q4G0T1 1027 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 PRR16Q569H4 304 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 HYIQ5T013 277 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 ANKRD40Q6AI12 368 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 FAM160B2Q86V87 743 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 DDX12PQ92771 950 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 TSG101Q99816 390 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 NUDT12Q9BQG2 462 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 VCPKMTQ9H867 229 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 PHLPP2Q6ZVD8 1323 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 CTIFO43310 598 aaKnown RBP9.4□□□□□ -0.9
HMGB4-203ENST00000519684 RRP9O43818 475 aaKnown RBP9.4□□□□□ -0.9
HMGB4-203ENST00000519684 ZBTB7AO95365 584 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 CCDC175P0C221 793 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 CAP2P40123 477 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 DNM2P50570 870 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 ETF1P62495 437 aaKnown RBP9.4□□□□□ -0.9
HMGB4-203ENST00000519684 CCDC174Q6PII3 467 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 TOGARAM2Q6ZUX3 1019 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 MIGA2Q7L4E1 593 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 IRF2BP1Q8IU81 584 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 REXO1L1PQ8IX06 675 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 MB21D1Q8N884 522 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 KIAA0895Q8NCT3 520 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 GJA10Q969M2 543 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 KIFC2Q96AC6 838 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 CNOT6LQ96LI5 555 aaKnown RBP9.4□□□□□ -0.9
HMGB4-203ENST00000519684 DUSP9Q99956 384 aaKnown RBP9.4□□□□□ -0.9
HMGB4-203ENST00000519684 TUBGCP2Q9BSJ2 902 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 MYOZ2Q9NPC6 264 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 KIAA1024Q9UPX6 916 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 ATAD5Q96QE3 1844 aa9.4□□□□□ -0.9
HMGB4-203ENST00000519684 FER1L6Q2WGJ9 1857 aa9.4□□□□□ -0.91
HMGB4-203ENST00000519684 A0A1W2PQC6 194 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 PIK3CDO00329 1044 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 ASNSP08243 561 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 HOXA13P31271 388 aaPredicted RBP9.39□□□□□ -0.91
HMGB4-203ENST00000519684 TNFAIP1Q13829 316 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 HSP90AA2PQ14568 343 aaPredicted RBP9.39□□□□□ -0.91
HMGB4-203ENST00000519684 SYCP1Q15431 976 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 ZYXQ15942 572 aaKnown RBP9.39□□□□□ -0.91
HMGB4-203ENST00000519684 TSR1Q2NL82 804 aaKnown RBP9.39□□□□□ -0.91
HMGB4-203ENST00000519684 NCAPH2Q6IBW4 605 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 KCNK18Q7Z418 384 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 CCDC65Q8IXS2 484 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 GUF1Q8N442 669 aaKnown RBP9.39□□□□□ -0.91
HMGB4-203ENST00000519684 CRYGNQ8WXF5 182 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 PKNOX2Q96KN3 472 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 FAM20AQ96MK3 541 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 UIMC1Q96RL1 719 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 FEZ1Q99689 392 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 PANK4Q9NVE7 773 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 DNAI1Q9UI46 699 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 FEM1BQ9UK73 627 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 MRPL11Q9Y3B7 192 aaKnown RBP9.39□□□□□ -0.91
HMGB4-203ENST00000519684 POTEB3A0JP26 581 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 SOWAHDA6NJG2 315 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 POTECB2RU33 542 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 GCOM1H8Y6P7 765 aaPredicted RBP9.39□□□□□ -0.91
HMGB4-203ENST00000519684 WNT10BO00744 389 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 PLA2G6O60733 806 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 KRT18P05783 430 aaKnown RBP9.39□□□□□ -0.91
HMGB4-203ENST00000519684 PLA2G4BP0C869 781 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 POLR2MP0CAP2 368 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 FXR1P51114 621 aaKnown RBP eCLIP9.39□□□□□ -0.91
HMGB4-203ENST00000519684 LRRC63Q05C16 580 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 ECM1Q16610 540 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 FKBP15Q5T1M5 1219 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 POTEBQ6S5H4 581 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 SAMD1Q6SPF0 538 aaPredicted RBP9.39□□□□□ -0.91
HMGB4-203ENST00000519684 CYP26C1Q6V0L0 522 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 GPBP1Q86WP2 473 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 TMTC1Q8IUR5 882 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 ETNPPLQ8TBG4 499 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 TSC1Q92574 1164 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 HPS3Q969F9 1004 aa9.39□□□□□ -0.91
HMGB4-203ENST00000519684 ZBED3Q96IU2 234 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms