RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 IL27Q8NEV9 243 aa10.24□□□□□ -0.77
TRIM35-202ENST00000519219 ZFP91Q96JP5 570 aaPredicted RBP10.24□□□□□ -0.77
TRIM35-202ENST00000519219 TTC14Q96N46 770 aa10.24□□□□□ -0.77
TRIM35-202ENST00000519219 IL25Q9H293 177 aa10.24□□□□□ -0.77
TRIM35-202ENST00000519219 EPHX3Q9H6B9 360 aa10.24□□□□□ -0.77
TRIM35-202ENST00000519219 HDAC6Q9UBN7 1215 aa10.24□□□□□ -0.77
TRIM35-202ENST00000519219 NOD1Q9Y239 953 aa10.24□□□□□ -0.77
TRIM35-202ENST00000519219 NLRC5Q86WI3 1866 aa10.23□□□□□ -0.77
TRIM35-202ENST00000519219 TLL1O43897 1013 aa10.23□□□□□ -0.77
TRIM35-202ENST00000519219 KPNA6O60684 536 aa10.23□□□□□ -0.77
TRIM35-202ENST00000519219 PPP1R11O60927 126 aaPredicted RBP10.23□□□□□ -0.77
TRIM35-202ENST00000519219 RGS20O76081 388 aa10.23□□□□□ -0.77
TRIM35-202ENST00000519219 GH1P01241 217 aa10.23□□□□□ -0.77
TRIM35-202ENST00000519219 CKBP12277 381 aa10.23□□□□□ -0.77
TRIM35-202ENST00000519219 EIF2AK2P19525 551 aaKnown RBP10.23□□□□□ -0.77
TRIM35-202ENST00000519219 SDSP20132 328 aa10.23□□□□□ -0.77
TRIM35-202ENST00000519219 PTPN11Q06124 597 aaPredicted RBP10.23□□□□□ -0.77
TRIM35-202ENST00000519219 BFSP2Q13515 415 aa10.23□□□□□ -0.77
TRIM35-202ENST00000519219 HDAC1Q13547 482 aaPredicted RBP10.23□□□□□ -0.77
TRIM35-202ENST00000519219 SLC35G1Q2M3R5 365 aa10.23□□□□□ -0.77
TRIM35-202ENST00000519219 TRIM71Q2Q1W2 868 aaKnown RBP10.23□□□□□ -0.77
TRIM35-202ENST00000519219 BRDTQ58F21 947 aaPredicted RBP10.23□□□□□ -0.77
TRIM35-202ENST00000519219 LRRC8DQ7L1W4 858 aa10.23□□□□□ -0.77
TRIM35-202ENST00000519219 STAG2Q8N3U4 1231 aa10.23□□□□□ -0.77
TRIM35-202ENST00000519219 ENAHQ8N8S7 591 aaPredicted RBP10.23□□□□□ -0.77
TRIM35-202ENST00000519219 RGS22Q8NE09 1264 aa10.23□□□□□ -0.77
TRIM35-202ENST00000519219 IL31RAQ8NI17 732 aa10.23□□□□□ -0.77
TRIM35-202ENST00000519219 PHOSPHO2Q8TCD6 241 aa10.23□□□□□ -0.77
TRIM35-202ENST00000519219 RMDN3Q96TC7 470 aa10.23□□□□□ -0.77
TRIM35-202ENST00000519219 ALG1Q9BT22 464 aa10.23□□□□□ -0.77
TRIM35-202ENST00000519219 OSBPL7Q9BZF2 842 aa10.23□□□□□ -0.77
TRIM35-202ENST00000519219 JMJD4Q9H9V9 463 aa10.23□□□□□ -0.77
TRIM35-202ENST00000519219 VAT1LQ9HCJ6 419 aa10.23□□□□□ -0.77
TRIM35-202ENST00000519219 MTUS1Q9ULD2 1270 aa10.23□□□□□ -0.77
TRIM35-202ENST00000519219 GTPBP6O43824 516 aaPredicted RBP10.22□□□□□ -0.77
TRIM35-202ENST00000519219 SELPP16109 830 aa10.22□□□□□ -0.77
TRIM35-202ENST00000519219 PSEN2P49810 448 aa10.22□□□□□ -0.77
TRIM35-202ENST00000519219 GPATCH4Q5T3I0 446 aaKnown RBP10.22□□□□□ -0.77
TRIM35-202ENST00000519219 B4GALNT3Q6L9W6 998 aa10.22□□□□□ -0.77
TRIM35-202ENST00000519219 FAM117BQ6P1L5 589 aa10.22□□□□□ -0.77
TRIM35-202ENST00000519219 SESTD1Q86VW0 696 aa10.22□□□□□ -0.77
TRIM35-202ENST00000519219 DGKHQ86XP1 1220 aa10.22□□□□□ -0.77
TRIM35-202ENST00000519219 AFAP1L1Q8TED9 768 aa10.22□□□□□ -0.77
TRIM35-202ENST00000519219 ESR2Q92731 530 aa10.22□□□□□ -0.77
TRIM35-202ENST00000519219 GPKOWQ92917 476 aaPredicted RBP eCLIP10.22□□□□□ -0.77
TRIM35-202ENST00000519219 TSPYL2Q9H2G4 693 aaPredicted RBP10.22□□□□□ -0.77
TRIM35-202ENST00000519219 BCAS3Q9H6U6 928 aa10.22□□□□□ -0.77
TRIM35-202ENST00000519219 CD320Q9NPF0 282 aa10.22□□□□□ -0.77
TRIM35-202ENST00000519219 ZBTB47Q9UFB7 747 aaPredicted RBP10.22□□□□□ -0.77
TRIM35-202ENST00000519219 GTF2IRD1Q9UHL9 959 aa10.22□□□□□ -0.77
TRIM35-202ENST00000519219 DDX41Q9UJV9 622 aaKnown RBP10.22□□□□□ -0.77
TRIM35-202ENST00000519219 ABCB11O95342 1321 aa10.22□□□□□ -0.77
TRIM35-202ENST00000519219 HAS3O00219 553 aa10.21□□□□□ -0.77
TRIM35-202ENST00000519219 ZNF213O14771 459 aa10.21□□□□□ -0.77
TRIM35-202ENST00000519219 BAIAP3O94812 1187 aa10.21□□□□□ -0.77
TRIM35-202ENST00000519219 CXCL10P02778 98 aa10.21□□□□□ -0.77
TRIM35-202ENST00000519219 NR3C2P08235 984 aa10.21□□□□□ -0.77
TRIM35-202ENST00000519219 KCNJ6P48051 423 aa10.21□□□□□ -0.77
TRIM35-202ENST00000519219 RBL2Q08999 1139 aa10.21□□□□□ -0.77
TRIM35-202ENST00000519219 MFSD10Q14728 455 aa10.21□□□□□ -0.77
TRIM35-202ENST00000519219 KIAA0753Q2KHM9 967 aa10.21□□□□□ -0.77
TRIM35-202ENST00000519219 ZNF618Q5T7W0 954 aa10.21□□□□□ -0.77
TRIM35-202ENST00000519219 ARHGEF16Q5VV41 709 aa10.21□□□□□ -0.77
TRIM35-202ENST00000519219 CWC27Q6UX04 472 aaKnown RBP10.21□□□□□ -0.77
TRIM35-202ENST00000519219 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.21□□□□□ -0.77
TRIM35-202ENST00000519219 FBXO11Q86XK2 927 aa10.21□□□□□ -0.77
TRIM35-202ENST00000519219 PLEKHM2Q8IWE5 1019 aa10.21□□□□□ -0.77
TRIM35-202ENST00000519219 CAGE1Q8TC20 777 aa10.21□□□□□ -0.77
TRIM35-202ENST00000519219 NSUN6Q8TEA1 469 aaKnown RBP10.21□□□□□ -0.77
TRIM35-202ENST00000519219 ANKS1AQ92625 1134 aa10.21□□□□□ -0.77
TRIM35-202ENST00000519219 ZSCAN10Q96SZ4 725 aaPredicted RBP10.21□□□□□ -0.77
TRIM35-202ENST00000519219 MPHOSPH6Q99547 160 aaKnown RBP10.21□□□□□ -0.77
TRIM35-202ENST00000519219 RNF41Q9H4P4 317 aaPredicted RBP10.21□□□□□ -0.77
TRIM35-202ENST00000519219 KAT14Q9H8E8 782 aa10.21□□□□□ -0.77
TRIM35-202ENST00000519219 PXMP2Q9NR77 195 aa10.21□□□□□ -0.77
TRIM35-202ENST00000519219 ZSWIM5Q9P217 1185 aa10.21□□□□□ -0.77
TRIM35-202ENST00000519219 PNMA2Q9UL42 364 aa10.21□□□□□ -0.77
TRIM35-202ENST00000519219 KAT6AQ92794 2004 aa10.21□□□□□ -0.78
TRIM35-202ENST00000519219 LINC01553A4QN01 128 aa10.2□□□□□ -0.78
TRIM35-202ENST00000519219 FAM86C2PA6NEL3 165 aa10.2□□□□□ -0.78
TRIM35-202ENST00000519219 DHX16O60231 1041 aaKnown RBP10.2□□□□□ -0.78
TRIM35-202ENST00000519219 F2P00734 622 aa10.2□□□□□ -0.78
TRIM35-202ENST00000519219 CFBP00751 764 aa10.2□□□□□ -0.78
TRIM35-202ENST00000519219 IGHDP01880 384 aa10.2□□□□□ -0.78
TRIM35-202ENST00000519219 PCP11498 1178 aaKnown RBP10.2□□□□□ -0.78
TRIM35-202ENST00000519219 CASTP20810 708 aaKnown RBP10.2□□□□□ -0.78
TRIM35-202ENST00000519219 HOXA13P31271 388 aaPredicted RBP10.2□□□□□ -0.78
TRIM35-202ENST00000519219 PLA2G5P39877 138 aa10.2□□□□□ -0.78
TRIM35-202ENST00000519219 HSD17B4P51659 736 aa10.2□□□□□ -0.78
TRIM35-202ENST00000519219 SP2Q02086 613 aa10.2□□□□□ -0.78
TRIM35-202ENST00000519219 MKRN4PQ13434 485 aaPredicted RBP10.2□□□□□ -0.78
TRIM35-202ENST00000519219 STXBP2Q15833 593 aa10.2□□□□□ -0.78
TRIM35-202ENST00000519219 DGKDQ16760 1214 aa10.2□□□□□ -0.78
TRIM35-202ENST00000519219 AAK1Q2M2I8 961 aa10.2□□□□□ -0.78
TRIM35-202ENST00000519219 HSDL1Q3SXM5 330 aa10.2□□□□□ -0.78
TRIM35-202ENST00000519219 ASPRV1Q53RT3 343 aa10.2□□□□□ -0.78
TRIM35-202ENST00000519219 CNKSR3Q6P9H4 555 aa10.2□□□□□ -0.78
TRIM35-202ENST00000519219 CYB5R4Q7L1T6 521 aa10.2□□□□□ -0.78
TRIM35-202ENST00000519219 C7orf31Q8N865 590 aa10.2□□□□□ -0.78
TRIM35-202ENST00000519219 HLA-CQ95604 372 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms