RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	TEX2	Q8IWB9	1127 aa		27.86	■■■□□ 2.05
CNOT7-204	ENST00000518885	FAM126B	Q8IXS8	530 aa		27.86	■■■□□ 2.05
CNOT7-204	ENST00000518885	NAP1L2	Q9ULW6	460 aa	Predicted RBP	27.86	■■■□□ 2.05
CNOT7-204	ENST00000518885	GOLGA8A	A7E2F4	631 aa		27.85	■■■□□ 2.05
CNOT7-204	ENST00000518885	GOLGA8B	A8MQT2	603 aa		27.85	■■■□□ 2.05
CNOT7-204	ENST00000518885	PIK3CD	O00329	1044 aa		27.85	■■■□□ 2.05
CNOT7-204	ENST00000518885	TIMP1	P01033	207 aa		27.85	■■■□□ 2.05
CNOT7-204	ENST00000518885	FPGS	Q05932	587 aa		27.85	■■■□□ 2.05
CNOT7-204	ENST00000518885	LAMC2	Q13753	1193 aa		27.85	■■■□□ 2.05
CNOT7-204	ENST00000518885	COL9A3	Q14050	684 aa	Predicted RBP	27.85	■■■□□ 2.05
CNOT7-204	ENST00000518885	XRRA1	Q6P2D8	792 aa		27.85	■■■□□ 2.05
CNOT7-204	ENST00000518885	RAB11FIP4	Q86YS3	637 aa		27.85	■■■□□ 2.05
CNOT7-204	ENST00000518885	CCDC82	Q8N4S0	544 aa		27.85	■■■□□ 2.05
CNOT7-204	ENST00000518885	TCEANC2	Q96MN5	208 aa		27.85	■■■□□ 2.05
CNOT7-204	ENST00000518885	PSTPIP2	Q9H939	334 aa		27.85	■■■□□ 2.05
CNOT7-204	ENST00000518885	LTBP2	Q14767	1821 aa		27.85	■■■□□ 2.05
CNOT7-204	ENST00000518885	ARIH2	O95376	493 aa		27.84	■■■□□ 2.05
CNOT7-204	ENST00000518885	SUPT20HL2	P0C7V6	817 aa		27.84	■■■□□ 2.05
CNOT7-204	ENST00000518885	PTGS1	P23219	599 aa		27.84	■■■□□ 2.05
CNOT7-204	ENST00000518885	LY6K	Q17RY6	165 aa		27.84	■■■□□ 2.05
CNOT7-204	ENST00000518885	CMTR1	Q8N1G2	835 aa	Known RBP	27.84	■■■□□ 2.05
CNOT7-204	ENST00000518885	EMID1	Q96A84	441 aa	Predicted RBP	27.84	■■■□□ 2.05
CNOT7-204	ENST00000518885	DDX41	Q9UJV9	622 aa	Known RBP	27.84	■■■□□ 2.05
CNOT7-204	ENST00000518885	TBX21	Q9UL17	535 aa		27.84	■■■□□ 2.05
CNOT7-204	ENST00000518885	hCG_1984214	I3L0E3	225 aa		27.83	■■■□□ 2.05
CNOT7-204	ENST00000518885	CAST	P20810	708 aa	Known RBP	27.83	■■■□□ 2.05
CNOT7-204	ENST00000518885	GPR153	Q6NV75	609 aa		27.83	■■■□□ 2.05
CNOT7-204	ENST00000518885	HEATR3	Q7Z4Q2	680 aa		27.83	■■■□□ 2.05
CNOT7-204	ENST00000518885	DHX37	Q8IY37	1157 aa	Known RBP	27.83	■■■□□ 2.05
CNOT7-204	ENST00000518885	ZNF713	Q8N859	430 aa	Predicted RBP	27.83	■■■□□ 2.05
CNOT7-204	ENST00000518885	COPS5	Q92905	334 aa		27.83	■■■□□ 2.05
CNOT7-204	ENST00000518885	EHMT1	Q9H9B1	1298 aa		27.83	■■■□□ 2.05
CNOT7-204	ENST00000518885	FRMPD4	Q14CM0	1322 aa		27.83	■■■□□ 2.05
CNOT7-204	ENST00000518885	BAZ2B	Q9UIF8	2168 aa	Known RBP	27.82	■■■□□ 2.04
CNOT7-204	ENST00000518885	CD4	P01730	458 aa		27.82	■■■□□ 2.04
CNOT7-204	ENST00000518885	RPS6KB1	P23443	525 aa		27.82	■■■□□ 2.04
CNOT7-204	ENST00000518885	METAP2	P50579	478 aa	Known RBP eCLIP	27.82	■■■□□ 2.04
CNOT7-204	ENST00000518885	DGKD	Q16760	1214 aa		27.82	■■■□□ 2.04
CNOT7-204	ENST00000518885	PPP1R18	Q6NYC8	613 aa		27.82	■■■□□ 2.04
CNOT7-204	ENST00000518885		Q6ZUG5	572 aa		27.82	■■■□□ 2.04
CNOT7-204	ENST00000518885	FBXL16	Q8N461	479 aa		27.82	■■■□□ 2.04
CNOT7-204	ENST00000518885	TMEM199	Q8N511	208 aa		27.82	■■■□□ 2.04
CNOT7-204	ENST00000518885	BRPF3	Q9ULD4	1205 aa		27.82	■■■□□ 2.04
CNOT7-204	ENST00000518885	PSMC6	P62333	389 aa		27.81	■■■□□ 2.04
CNOT7-204	ENST00000518885	PTPN11	Q06124	597 aa	Predicted RBP	27.81	■■■□□ 2.04
CNOT7-204	ENST00000518885	ARHGAP1	Q07960	439 aa		27.81	■■■□□ 2.04
CNOT7-204	ENST00000518885	MFSD5	Q6N075	450 aa		27.81	■■■□□ 2.04
CNOT7-204	ENST00000518885	NFRKB	Q6P4R8	1299 aa		27.81	■■■□□ 2.04
CNOT7-204	ENST00000518885	AFG1L	Q8WV93	481 aa		27.81	■■■□□ 2.04
CNOT7-204	ENST00000518885	SPDYE3	A6NKU9	549 aa		27.8	■■■□□ 2.04
CNOT7-204	ENST00000518885	MMP3	P08254	477 aa		27.8	■■■□□ 2.04
CNOT7-204	ENST00000518885	PPIG	Q13427	754 aa	Known RBP eCLIP	27.8	■■■□□ 2.04
CNOT7-204	ENST00000518885	PPTC7	Q8NI37	304 aa		27.8	■■■□□ 2.04
CNOT7-204	ENST00000518885	BRF1	Q92994	677 aa		27.8	■■■□□ 2.04
CNOT7-204	ENST00000518885	KATNAL1	Q9BW62	490 aa		27.8	■■■□□ 2.04
CNOT7-204	ENST00000518885	GLT8D2	Q9H1C3	349 aa		27.8	■■■□□ 2.04
CNOT7-204	ENST00000518885	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	27.8	■■■□□ 2.04
CNOT7-204	ENST00000518885	KIAA1217	Q5T5P2	1943 aa		27.8	■■■□□ 2.04
CNOT7-204	ENST00000518885	CNTNAP5	Q8WYK1	1306 aa		27.79	■■■□□ 2.04
CNOT7-204	ENST00000518885	FAM47C	Q5HY64	1035 aa		27.79	■■■□□ 2.04
CNOT7-204	ENST00000518885	PCNX4	Q63HM2	1172 aa		27.79	■■■□□ 2.04
CNOT7-204	ENST00000518885	USP17L6P	Q6QN14	398 aa		27.79	■■■□□ 2.04
CNOT7-204	ENST00000518885	HIPK3	Q9H422	1215 aa		27.79	■■■□□ 2.04
CNOT7-204	ENST00000518885	GRIN2D	O15399	1336 aa		27.78	■■■□□ 2.04
CNOT7-204	ENST00000518885	MEIS2	O14770	477 aa		27.78	■■■□□ 2.04
CNOT7-204	ENST00000518885	NAPA	P54920	295 aa		27.78	■■■□□ 2.04
CNOT7-204	ENST00000518885	NLRX1	Q86UT6	975 aa		27.78	■■■□□ 2.04
CNOT7-204	ENST00000518885	IL31RA	Q8NI17	732 aa		27.78	■■■□□ 2.04
CNOT7-204	ENST00000518885	CYP46A1	Q9Y6A2	500 aa		27.78	■■■□□ 2.04
CNOT7-204	ENST00000518885	hCG_1642624	A0A1W2PR95	340 aa		27.77	■■■□□ 2.04
CNOT7-204	ENST00000518885	FIBP	O43427	364 aa		27.77	■■■□□ 2.04
CNOT7-204	ENST00000518885	ITGB8	P26012	769 aa		27.77	■■■□□ 2.04
CNOT7-204	ENST00000518885	APOBR	Q0VD83	1088 aa		27.77	■■■□□ 2.04
CNOT7-204	ENST00000518885	NBPF20	Q3BBV1	942 aa		27.77	■■■□□ 2.04
CNOT7-204	ENST00000518885	CELF3	Q5SZQ8	465 aa	Known RBP	27.77	■■■□□ 2.04
CNOT7-204	ENST00000518885	RUFY3	Q7L099	469 aa		27.77	■■■□□ 2.04
CNOT7-204	ENST00000518885	CDHR1	Q96JP9	859 aa		27.77	■■■□□ 2.04
CNOT7-204	ENST00000518885	USP26	Q9BXU7	913 aa		27.77	■■■□□ 2.04
CNOT7-204	ENST00000518885	MLXIP	Q9HAP2	919 aa		27.77	■■■□□ 2.04
CNOT7-204	ENST00000518885	NOD1	Q9Y239	953 aa		27.77	■■■□□ 2.04
CNOT7-204	ENST00000518885		V9GY48	417 aa	Predicted RBP	27.77	■■■□□ 2.04
CNOT7-204	ENST00000518885	B4GALT4	O60513	344 aa		27.76	■■■□□ 2.03
CNOT7-204	ENST00000518885	RGS20	O76081	388 aa		27.76	■■■□□ 2.03
CNOT7-204	ENST00000518885	GGPS1	O95749	300 aa		27.76	■■■□□ 2.03
CNOT7-204	ENST00000518885	CPA1	P15085	419 aa		27.76	■■■□□ 2.03
CNOT7-204	ENST00000518885	NEDD9	Q14511	834 aa		27.76	■■■□□ 2.03
CNOT7-204	ENST00000518885	GIMAP8	Q8ND71	665 aa	Predicted RBP	27.76	■■■□□ 2.03
CNOT7-204	ENST00000518885	SPATA33	Q96N06	139 aa		27.76	■■■□□ 2.03
CNOT7-204	ENST00000518885	INPP4A	Q96PE3	977 aa	Predicted RBP	27.76	■■■□□ 2.03
CNOT7-204	ENST00000518885	PPP1R12C	Q9BZL4	782 aa		27.76	■■■□□ 2.03
CNOT7-204	ENST00000518885	TM6SF1	Q9BZW5	370 aa		27.76	■■■□□ 2.03
CNOT7-204	ENST00000518885	TRPV6	Q9H1D0	765 aa		27.76	■■■□□ 2.03
CNOT7-204	ENST00000518885	PPFIA4	O75335	1185 aa		27.75	■■■□□ 2.03
CNOT7-204	ENST00000518885	ICAM3	P32942	547 aa		27.75	■■■□□ 2.03
CNOT7-204	ENST00000518885	AKAP17A	Q02040	695 aa	Known RBP	27.75	■■■□□ 2.03
CNOT7-204	ENST00000518885	SHH	Q15465	462 aa		27.75	■■■□□ 2.03
CNOT7-204	ENST00000518885	MYSM1	Q5VVJ2	828 aa		27.75	■■■□□ 2.03
CNOT7-204	ENST00000518885	CCDC12	Q8WUD4	166 aa	Predicted RBP	27.75	■■■□□ 2.03
CNOT7-204	ENST00000518885	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	27.75	■■■□□ 2.03
CNOT7-204	ENST00000518885	AGXT2	Q9BYV1	514 aa		27.75	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms