RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 OPA1O60313 960 aa6.43□□□□□ -1.38
SQLE-202ENST00000518604 DNAJC6O75061 913 aa6.43□□□□□ -1.38
SQLE-202ENST00000518604 FUCA1P04066 466 aa6.43□□□□□ -1.38
SQLE-202ENST00000518604 GRK2P25098 689 aa6.43□□□□□ -1.38
SQLE-202ENST00000518604 TRHRP34981 398 aaPredicted RBP6.43□□□□□ -1.38
SQLE-202ENST00000518604 GRK3P35626 688 aa6.43□□□□□ -1.38
SQLE-202ENST00000518604 TIGD5Q53EQ6 642 aa6.43□□□□□ -1.38
SQLE-202ENST00000518604 FAM47CQ5HY64 1035 aa6.43□□□□□ -1.38
SQLE-202ENST00000518604 UBE2R2Q712K3 238 aaPredicted RBP6.43□□□□□ -1.38
SQLE-202ENST00000518604 LRRTM3Q86VH5 581 aa6.43□□□□□ -1.38
SQLE-202ENST00000518604 NLRP10Q86W26 655 aa6.43□□□□□ -1.38
SQLE-202ENST00000518604 ZC3H7AQ8IWR0 971 aaKnown RBP6.43□□□□□ -1.38
SQLE-202ENST00000518604 PPM1KQ8N3J5 372 aa6.43□□□□□ -1.38
SQLE-202ENST00000518604 NETO2Q8NC67 525 aa6.43□□□□□ -1.38
SQLE-202ENST00000518604 PCDH19Q8TAB3 1148 aa6.43□□□□□ -1.38
SQLE-202ENST00000518604 DDX1Q92499 740 aaKnown RBP6.43□□□□□ -1.38
SQLE-202ENST00000518604 FBXW5Q969U6 566 aa6.43□□□□□ -1.38
SQLE-202ENST00000518604 EPB41L1Q9H4G0 881 aa6.43□□□□□ -1.38
SQLE-202ENST00000518604 MAPRE3Q9UPY8 281 aa6.43□□□□□ -1.38
SQLE-202ENST00000518604 YBX2Q9Y2T7 364 aaKnown RBP6.43□□□□□ -1.38
SQLE-202ENST00000518604 RWDD3Q9Y3V2 267 aa6.43□□□□□ -1.38
SQLE-202ENST00000518604 KRTAP4-8A0A0G2JLE6 195 aa6.42□□□□□ -1.38
SQLE-202ENST00000518604 IRS4O14654 1257 aaPredicted RBP6.42□□□□□ -1.38
SQLE-202ENST00000518604 SRGAP3O43295 1099 aa6.42□□□□□ -1.38
SQLE-202ENST00000518604 DGKIO75912 1065 aa6.42□□□□□ -1.38
SQLE-202ENST00000518604 RASGRP1O95267 797 aa6.42□□□□□ -1.38
SQLE-202ENST00000518604 VIL1P09327 827 aaKnown RBP6.42□□□□□ -1.38
SQLE-202ENST00000518604 MSL3P1P0C860 447 aa6.42□□□□□ -1.38
SQLE-202ENST00000518604 ERVFRD-1P60508 538 aa6.42□□□□□ -1.38
SQLE-202ENST00000518604 C16orf59Q7L2K0 433 aa6.42□□□□□ -1.38
SQLE-202ENST00000518604 KRT26Q7Z3Y9 468 aa6.42□□□□□ -1.38
SQLE-202ENST00000518604 DDX53Q86TM3 631 aaKnown RBP6.42□□□□□ -1.38
SQLE-202ENST00000518604 ANKLE2Q86XL3 938 aa6.42□□□□□ -1.38
SQLE-202ENST00000518604 TEX2Q8IWB9 1127 aa6.42□□□□□ -1.38
SQLE-202ENST00000518604 CELF4Q9BZC1 486 aaKnown RBP6.42□□□□□ -1.38
SQLE-202ENST00000518604 SLC6A17Q9H1V8 727 aa6.42□□□□□ -1.38
SQLE-202ENST00000518604 BTG4Q9NY30 223 aa6.42□□□□□ -1.38
SQLE-202ENST00000518604 FBXL7Q9UJT9 491 aa6.42□□□□□ -1.38
SQLE-202ENST00000518604 TNPO3Q9Y5L0 923 aaKnown RBP6.42□□□□□ -1.38
SQLE-202ENST00000518604 A0A087X0B3 334 aa6.41□□□□□ -1.38
SQLE-202ENST00000518604 EFEMP2O95967 443 aa6.41□□□□□ -1.38
SQLE-202ENST00000518604 GLI4P10075 376 aa6.41□□□□□ -1.38
SQLE-202ENST00000518604 MYCLP1P12525 358 aaPredicted RBP6.41□□□□□ -1.38
SQLE-202ENST00000518604 JUNBP17275 347 aaPredicted RBP6.41□□□□□ -1.38
SQLE-202ENST00000518604 KCNA6P17658 529 aa6.41□□□□□ -1.38
SQLE-202ENST00000518604 SLC6A11P48066 632 aa6.41□□□□□ -1.38
SQLE-202ENST00000518604 SPIRE1Q08AE8 756 aa6.41□□□□□ -1.38
SQLE-202ENST00000518604 NR1I3Q14994 352 aa6.41□□□□□ -1.38
SQLE-202ENST00000518604 CHRNA2Q15822 529 aa6.41□□□□□ -1.38
SQLE-202ENST00000518604 BICRALQ6AI39 1079 aa6.41□□□□□ -1.38
SQLE-202ENST00000518604 ZCCHC8Q6NZY4 707 aaKnown RBP6.41□□□□□ -1.38
SQLE-202ENST00000518604 KRTAP19-1Q8IUB9 90 aa6.41□□□□□ -1.38
SQLE-202ENST00000518604 ORAI3Q9BRQ5 295 aa6.41□□□□□ -1.38
SQLE-202ENST00000518604 BRINP2Q9C0B6 783 aa6.41□□□□□ -1.38
SQLE-202ENST00000518604 RNF32Q9H0A6 362 aa6.41□□□□□ -1.38
SQLE-202ENST00000518604 IPPKQ9H8X2 491 aa6.41□□□□□ -1.38
SQLE-202ENST00000518604 TNFRSF12AQ9NP84 129 aa6.41□□□□□ -1.38
SQLE-202ENST00000518604 GSG1L2A8MUP6 293 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 PDE8AO60658 829 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 MAFKO60675 156 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 CYBBP04839 570 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 MPOP05164 745 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 CKMP06732 381 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 GLI1P08151 1106 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 ITGB5P18084 799 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 FPR2P25090 351 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 ST5P78524 1137 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 TMEM62Q0P6H9 643 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 KIR3DS1Q14943 382 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 CFAP100Q494V2 611 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 FYB2Q5VWT5 728 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 WWC2Q6AWC2 1192 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 CYP4F22Q6NT55 531 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 PAQR3Q6TCH7 311 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 FILIP1Q7Z7B0 1213 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 ZSWIM9Q86XI8 627 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 KIF18BQ86Y91 864 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 DCP2Q8IU60 420 aaKnown RBP6.4□□□□□ -1.38
SQLE-202ENST00000518604 ZCRB1Q8TBF4 217 aaKnown RBP6.4□□□□□ -1.38
SQLE-202ENST00000518604 CAAP1Q9H8G2 361 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 IFT57Q9NWB7 429 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 NUDT5Q9UKK9 219 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 NUB1Q9Y5A7 615 aa6.4□□□□□ -1.38
SQLE-202ENST00000518604 KRIT1O00522 736 aa6.39□□□□□ -1.39
SQLE-202ENST00000518604 ABLIM1O14639 778 aa6.39□□□□□ -1.39
SQLE-202ENST00000518604 TACR1P25103 407 aa6.39□□□□□ -1.39
SQLE-202ENST00000518604 SOX5P35711 763 aa6.39□□□□□ -1.39
SQLE-202ENST00000518604 STAT3P40763 770 aa6.39□□□□□ -1.39
SQLE-202ENST00000518604 LACTBP83111 547 aaPredicted RBP6.39□□□□□ -1.39
SQLE-202ENST00000518604 KCNMB1Q16558 191 aa6.39□□□□□ -1.39
SQLE-202ENST00000518604 HABP4Q5JVS0 413 aaKnown RBP6.39□□□□□ -1.39
SQLE-202ENST00000518604 CDCA2Q69YH5 1023 aaPredicted RBP6.39□□□□□ -1.39
SQLE-202ENST00000518604 CNNM4Q6P4Q7 775 aa6.39□□□□□ -1.39
SQLE-202ENST00000518604 OTOP3Q7RTS5 596 aa6.39□□□□□ -1.39
SQLE-202ENST00000518604 THNSL2Q86YJ6 484 aa6.39□□□□□ -1.39
SQLE-202ENST00000518604 IRF2BP1Q8IU81 584 aa6.39□□□□□ -1.39
SQLE-202ENST00000518604 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.39□□□□□ -1.39
SQLE-202ENST00000518604 CHAC2Q8WUX2 184 aa6.39□□□□□ -1.39
SQLE-202ENST00000518604 SEC14L1Q92503 715 aa6.39□□□□□ -1.39
SQLE-202ENST00000518604 PEX11GQ96HA9 241 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms