RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 HOXC10Q9NYD6 342 aa7.2□□□□□ -1.26
MRPS28-203ENST00000518371 ISY1Q9ULR0 285 aaKnown RBP7.2□□□□□ -1.26
MRPS28-203ENST00000518371 PTPN22Q9Y2R2 807 aa7.2□□□□□ -1.26
MRPS28-203ENST00000518371 CASP8AP2Q9UKL3 1982 aa7.2□□□□□ -1.26
MRPS28-203ENST00000518371 RAD50Q92878 1312 aa7.2□□□□□ -1.26
MRPS28-203ENST00000518371 ROBO3Q96MS0 1386 aa7.2□□□□□ -1.26
MRPS28-203ENST00000518371 PIK3R2O00459 728 aa7.19□□□□□ -1.26
MRPS28-203ENST00000518371 TNPO2O14787 897 aaKnown RBP7.19□□□□□ -1.26
MRPS28-203ENST00000518371 WDR46O15213 610 aaKnown RBP7.19□□□□□ -1.26
MRPS28-203ENST00000518371 ORC4O43929 436 aa7.19□□□□□ -1.26
MRPS28-203ENST00000518371 FLOT1O75955 427 aa7.19□□□□□ -1.26
MRPS28-203ENST00000518371 TTLL1O95922 423 aa7.19□□□□□ -1.26
MRPS28-203ENST00000518371 PCP11498 1178 aaKnown RBP7.19□□□□□ -1.26
MRPS28-203ENST00000518371 SMTNP53814 917 aa7.19□□□□□ -1.26
MRPS28-203ENST00000518371 PRMT2P55345 433 aa7.19□□□□□ -1.26
MRPS28-203ENST00000518371 LBRQ14739 615 aaKnown RBP7.19□□□□□ -1.26
MRPS28-203ENST00000518371 FAM110CQ1W6H9 321 aa7.19□□□□□ -1.26
MRPS28-203ENST00000518371 BMP2KLQ5H9B9 411 aa7.19□□□□□ -1.26
MRPS28-203ENST00000518371 CASC1Q6TDU7 716 aa7.19□□□□□ -1.26
MRPS28-203ENST00000518371 ZNF295-AS1Q8N0V1 137 aa7.19□□□□□ -1.26
MRPS28-203ENST00000518371 COA7Q96BR5 231 aa7.19□□□□□ -1.26
MRPS28-203ENST00000518371 CEP95Q96GE4 821 aa7.19□□□□□ -1.26
MRPS28-203ENST00000518371 GOLGA2P5Q9HBQ8 144 aa7.19□□□□□ -1.26
MRPS28-203ENST00000518371 RBPJLQ9UBG7 517 aa7.19□□□□□ -1.26
MRPS28-203ENST00000518371 SERTAD1Q9UHV2 236 aa7.19□□□□□ -1.26
MRPS28-203ENST00000518371 HCN2Q9UL51 889 aa7.19□□□□□ -1.26
MRPS28-203ENST00000518371 STX8Q9UNK0 236 aa7.19□□□□□ -1.26
MRPS28-203ENST00000518371 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.19□□□□□ -1.26
MRPS28-203ENST00000518371 ZMYM6O95789 1325 aa7.19□□□□□ -1.26
MRPS28-203ENST00000518371 ADGRA2Q96PE1 1338 aa7.19□□□□□ -1.26
MRPS28-203ENST00000518371 DOCK1Q14185 1865 aa7.19□□□□□ -1.26
MRPS28-203ENST00000518371 CDK5RAP2Q96SN8 1893 aa7.19□□□□□ -1.26
MRPS28-203ENST00000518371 SIPA1L1O43166 1804 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 FOCADQ5VW36 1801 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 NAV1Q8NEY1 1877 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 IGKV6D-41A0A0C4DH26 115 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 F5H6K3 240 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 C2CD2LO14523 706 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 SGSM2O43147 1006 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 PEX10O60683 326 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 FGRP09769 529 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 CCNA1P78396 465 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 CAP1Q01518 475 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 PTH1RQ03431 593 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 KLRC3Q07444 240 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 KIAA1755Q5JYT7 1200 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 FAM83BQ5T0W9 1011 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 ARTNQ5T4W7 220 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 WDR78Q5VTH9 848 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 SLFN13Q68D06 897 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 TBC1D10CQ8IV04 446 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 RAET1EQ8TD07 263 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 STAG1Q8WVM7 1258 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 ESR2Q92731 530 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 MKL1Q969V6 931 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 CHMP4CQ96CF2 233 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 ABHD17AQ96GS6 310 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 IL25Q9H293 177 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 TXNRD2Q9NNW7 524 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 ZFP64Q9NPA5 681 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 NDFIP2Q9NV92 336 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 MORF4L1Q9UBU8 362 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 SRRDQ9UH36 339 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 GDF2Q9UK05 429 aaPredicted RBP7.18□□□□□ -1.26
MRPS28-203ENST00000518371 MTMR7Q9Y216 660 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 RABGAP1Q9Y3P9 1069 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 CTDP1Q9Y5B0 961 aaPredicted RBP7.18□□□□□ -1.26
MRPS28-203ENST00000518371 TACC3Q9Y6A5 838 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 MYH7P12883 1935 aa7.18□□□□□ -1.26
MRPS28-203ENST00000518371 BAZ2AQ9UIF9 1905 aaKnown RBP7.17□□□□□ -1.26
MRPS28-203ENST00000518371 GNB5O14775 395 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 BNIP3LO60238 219 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 NMT2O60551 498 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 CDC45O75419 566 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 NDUFB10O96000 172 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 ATP4AP20648 1035 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 MCCP23508 829 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 CTGFP29279 349 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 MAPK4P31152 587 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 ERVK-24P63145 666 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 TRDNQ13061 729 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 IKQ13123 557 aaPredicted RBP7.17□□□□□ -1.26
MRPS28-203ENST00000518371 PLS1Q14651 629 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 MTFR1Q15390 333 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 CCDC178Q5BJE1 867 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 NBPF11Q86T75 865 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 IQCA1Q86XH1 822 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 LRRC47Q8N1G4 583 aaKnown RBP7.17□□□□□ -1.26
MRPS28-203ENST00000518371 MB21D1Q8N884 522 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 ATG4CQ96DT6 458 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 NUP88Q99567 741 aaPredicted RBP7.17□□□□□ -1.26
MRPS28-203ENST00000518371 KRT23Q9C075 422 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 CRISPLD1Q9H336 500 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 CNNM2Q9H8M5 875 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 ANO2Q9NQ90 1003 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 IL17RBQ9NRM6 502 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 TCP11L1Q9NUJ3 509 aa7.17□□□□□ -1.26
MRPS28-203ENST00000518371 DNAAF2Q9NVR5 837 aaKnown RBP7.17□□□□□ -1.26
MRPS28-203ENST00000518371 BIN2Q9UBW5 565 aaPredicted RBP7.17□□□□□ -1.26
MRPS28-203ENST00000518371 SYNPO2Q9UMS6 1093 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms