RNA–Protein interactions for RNA: ENST00000518236.1

FAM3B-206, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 2

Gene FAM3B, Length 1,052 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-206ENST00000518236 SRBD1Q8N5C6 995 aaKnown RBP12.49□□□□□ -0.41
FAM3B-206ENST00000518236 DEFB123Q8N688 67 aa12.49□□□□□ -0.41
FAM3B-206ENST00000518236 SAMD3Q8N6K7 520 aa12.49□□□□□ -0.41
FAM3B-206ENST00000518236 PIBF1Q8WXW3 757 aa12.49□□□□□ -0.41
FAM3B-206ENST00000518236 CCDC136Q96JN2 1154 aa12.49□□□□□ -0.41
FAM3B-206ENST00000518236 SEZ6LQ9BYH1 1024 aa12.49□□□□□ -0.41
FAM3B-206ENST00000518236 POLR3EQ9NVU0 708 aa12.49□□□□□ -0.41
FAM3B-206ENST00000518236 DDX41Q9UJV9 622 aaKnown RBP12.49□□□□□ -0.41
FAM3B-206ENST00000518236 GCOM1H8Y6P7 765 aaPredicted RBP12.48□□□□□ -0.41
FAM3B-206ENST00000518236 TLR3O15455 904 aaKnown RBP12.48□□□□□ -0.41
FAM3B-206ENST00000518236 MYL3P08590 195 aa12.48□□□□□ -0.41
FAM3B-206ENST00000518236 POLR2MP0CAP2 368 aa12.48□□□□□ -0.41
FAM3B-206ENST00000518236 CSF2RAP15509 400 aa12.48□□□□□ -0.41
FAM3B-206ENST00000518236 CYP2C18P33260 490 aa12.48□□□□□ -0.41
FAM3B-206ENST00000518236 PGM5Q15124 567 aa12.48□□□□□ -0.41
FAM3B-206ENST00000518236 SGMS1Q86VZ5 419 aa12.48□□□□□ -0.41
FAM3B-206ENST00000518236 RAB11FIP4Q86YS3 637 aa12.48□□□□□ -0.41
FAM3B-206ENST00000518236 CTCFLQ8NI51 663 aaPredicted RBP12.48□□□□□ -0.41
FAM3B-206ENST00000518236 PPP1R13LQ8WUF5 828 aa12.48□□□□□ -0.41
FAM3B-206ENST00000518236 AFG1LQ8WV93 481 aa12.48□□□□□ -0.41
FAM3B-206ENST00000518236 KCNB2Q92953 911 aa12.48□□□□□ -0.41
FAM3B-206ENST00000518236 VWCEQ96DN2 955 aa12.48□□□□□ -0.41
FAM3B-206ENST00000518236 ZFP91Q96JP5 570 aaPredicted RBP12.48□□□□□ -0.41
FAM3B-206ENST00000518236 NEK1Q96PY6 1258 aa12.48□□□□□ -0.41
FAM3B-206ENST00000518236 MTG1Q9BT17 334 aaPredicted RBP12.48□□□□□ -0.41
FAM3B-206ENST00000518236 PPP1R12CQ9BZL4 782 aa12.48□□□□□ -0.41
FAM3B-206ENST00000518236 ALDH8A1Q9H2A2 487 aaPredicted RBP12.48□□□□□ -0.41
FAM3B-206ENST00000518236 MTMR10Q9NXD2 777 aa12.48□□□□□ -0.41
FAM3B-206ENST00000518236 A0A0C4DFX4 3053 aa12.48□□□□□ -0.41
FAM3B-206ENST00000518236 BAZ2BQ9UIF8 2168 aaKnown RBP12.47□□□□□ -0.41
FAM3B-206ENST00000518236 FRMPD4Q14CM0 1322 aa12.47□□□□□ -0.41
FAM3B-206ENST00000518236 CCDC69A6NI79 296 aa12.47□□□□□ -0.41
FAM3B-206ENST00000518236 KPNA6O60684 536 aa12.47□□□□□ -0.41
FAM3B-206ENST00000518236 GH1P01241 217 aa12.47□□□□□ -0.41
FAM3B-206ENST00000518236 KIF5BP33176 963 aa12.47□□□□□ -0.41
FAM3B-206ENST00000518236 TRAF1Q13077 416 aa12.47□□□□□ -0.41
FAM3B-206ENST00000518236 NBPF20Q3BBV1 942 aa12.47□□□□□ -0.41
FAM3B-206ENST00000518236 TMEM240Q5SV17 173 aa12.47□□□□□ -0.41
FAM3B-206ENST00000518236 FAM109BQ6ICB4 259 aaPredicted RBP12.47□□□□□ -0.41
FAM3B-206ENST00000518236 NFXL1Q6ZNB6 911 aa12.47□□□□□ -0.41
FAM3B-206ENST00000518236 FCHSD1Q86WN1 690 aa12.47□□□□□ -0.41
FAM3B-206ENST00000518236 KAT2BQ92831 832 aa12.47□□□□□ -0.41
FAM3B-206ENST00000518236 GPKOWQ92917 476 aaPredicted RBP eCLIP12.47□□□□□ -0.41
FAM3B-206ENST00000518236 TCEANC2Q96MN5 208 aa12.47□□□□□ -0.41
FAM3B-206ENST00000518236 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.47□□□□□ -0.416e-10■□□□□ 8.5
FAM3B-206ENST00000518236 LZTS2Q9BRK4 669 aa12.47□□□□□ -0.41
FAM3B-206ENST00000518236 NOC4LQ9BVI4 516 aaKnown RBP12.47□□□□□ -0.41
FAM3B-206ENST00000518236 WNT8AQ9H1J5 351 aa12.47□□□□□ -0.41
FAM3B-206ENST00000518236 TRMT13Q9NUP7 481 aaKnown RBP12.47□□□□□ -0.41
FAM3B-206ENST00000518236 BRPF3Q9ULD4 1205 aa12.47□□□□□ -0.41
FAM3B-206ENST00000518236 MEIS2O14770 477 aa12.46□□□□□ -0.41
FAM3B-206ENST00000518236 MMP3P08254 477 aa12.46□□□□□ -0.41
FAM3B-206ENST00000518236 ACRP10323 421 aa12.46□□□□□ -0.41
FAM3B-206ENST00000518236 CYP2C9P11712 490 aa12.46□□□□□ -0.41
FAM3B-206ENST00000518236 MYCLP12524 364 aaPredicted RBP12.46□□□□□ -0.41
FAM3B-206ENST00000518236 GNAQP50148 359 aa12.46□□□□□ -0.41
FAM3B-206ENST00000518236 MRPS9P82933 396 aaKnown RBP12.46□□□□□ -0.41
FAM3B-206ENST00000518236 SP2Q02086 613 aa12.46□□□□□ -0.41
FAM3B-206ENST00000518236 RASIP1Q5U651 963 aa12.46□□□□□ -0.41
FAM3B-206ENST00000518236 RNF20Q5VTR2 975 aa12.46□□□□□ -0.41
FAM3B-206ENST00000518236 DHX32Q7L7V1 743 aaKnown RBP12.46□□□□□ -0.41
FAM3B-206ENST00000518236 FANCBQ8NB91 859 aa12.46□□□□□ -0.41
FAM3B-206ENST00000518236 EMID1Q96A84 441 aaPredicted RBP12.46□□□□□ -0.41
FAM3B-206ENST00000518236 RRP36Q96EU6 259 aaKnown RBP12.46□□□□□ -0.41
FAM3B-206ENST00000518236 RNPC3Q96LT9 517 aaKnown RBP12.46□□□□□ -0.41
FAM3B-206ENST00000518236 CTAGE1Q96RT6 745 aa12.46□□□□□ -0.41
FAM3B-206ENST00000518236 HIPK3Q9H422 1215 aa12.46□□□□□ -0.41
FAM3B-206ENST00000518236 SLC12A7Q9Y666 1083 aa12.46□□□□□ -0.41
FAM3B-206ENST00000518236 hCG_1642624A0A1W2PR95 340 aa12.45□□□□□ -0.42
FAM3B-206ENST00000518236 CALM1P0DP23 149 aa12.45□□□□□ -0.42
FAM3B-206ENST00000518236 CALM2P0DP24 149 aa12.45□□□□□ -0.42
FAM3B-206ENST00000518236 CALM3P0DP25 149 aa12.45□□□□□ -0.42
FAM3B-206ENST00000518236 CCL23P55773 120 aa12.45□□□□□ -0.42
FAM3B-206ENST00000518236 SMAD3P84022 425 aaKnown RBP12.45□□□□□ -0.42
FAM3B-206ENST00000518236 FUT2Q10981 343 aa12.45□□□□□ -0.42
FAM3B-206ENST00000518236 PPIGQ13427 754 aaKnown RBP eCLIP12.45□□□□□ -0.428e-7■■□□□ 11.9
FAM3B-206ENST00000518236 BRDTQ58F21 947 aaPredicted RBP12.45□□□□□ -0.42
FAM3B-206ENST00000518236 NFRKBQ6P4R8 1299 aa12.45□□□□□ -0.42
FAM3B-206ENST00000518236 APOA5Q6Q788 366 aa12.45□□□□□ -0.42
FAM3B-206ENST00000518236 USP17L6PQ6QN14 398 aa12.45□□□□□ -0.42
FAM3B-206ENST00000518236 TMTC3Q6ZXV5 915 aa12.45□□□□□ -0.42
FAM3B-206ENST00000518236 ZNF365Q70YC5 407 aa12.45□□□□□ -0.42
FAM3B-206ENST00000518236 TMEM199Q8N511 208 aa12.45□□□□□ -0.42
FAM3B-206ENST00000518236 GUCD1Q96NT3 240 aa12.45□□□□□ -0.42
FAM3B-206ENST00000518236 BCAS3Q9H6U6 928 aa12.45□□□□□ -0.42
FAM3B-206ENST00000518236 FAM217BQ9NTX9 383 aaPredicted RBP12.45□□□□□ -0.42
FAM3B-206ENST00000518236 MRVI1Q9Y6F6 885 aa12.45□□□□□ -0.42
FAM3B-206ENST00000518236 VCANP13611 3396 aa12.45□□□□□ -0.42
FAM3B-206ENST00000518236 PRUNE2Q8WUY3 3088 aa12.45□□□□□ -0.42
FAM3B-206ENST00000518236 SCN10AQ9Y5Y9 1956 aa12.44□□□□□ -0.42
FAM3B-206ENST00000518236 PIK3CDO00329 1044 aa12.44□□□□□ -0.42
FAM3B-206ENST00000518236 HOXD8P13378 290 aaPredicted RBP12.44□□□□□ -0.42
FAM3B-206ENST00000518236 CPA1P15085 419 aa12.44□□□□□ -0.42
FAM3B-206ENST00000518236 HSPA4P34932 840 aa12.44□□□□□ -0.42
FAM3B-206ENST00000518236 SEMA3FQ13275 785 aa12.44□□□□□ -0.42
FAM3B-206ENST00000518236 LAMC2Q13753 1193 aa12.44□□□□□ -0.42
FAM3B-206ENST00000518236 HSDL1Q3SXM5 330 aa12.44□□□□□ -0.42
FAM3B-206ENST00000518236 CELF3Q5SZQ8 465 aaKnown RBP12.44□□□□□ -0.42
FAM3B-206ENST00000518236 MYSM1Q5VVJ2 828 aa12.44□□□□□ -0.42
FAM3B-206ENST00000518236 MICU3Q86XE3 530 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms