RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 IL9P15248 144 aa13.35□□□□□ -0.27
CTNNA1-205ENST00000517904 KCNA5P22460 613 aa13.35□□□□□ -0.27
CTNNA1-205ENST00000517904 ZNF543Q08ER8 600 aa13.35□□□□□ -0.27
CTNNA1-205ENST00000517904 MBTPS1Q14703 1052 aa13.35□□□□□ -0.27
CTNNA1-205ENST00000517904 LY6KQ17RY6 165 aa13.35□□□□□ -0.27
CTNNA1-205ENST00000517904 LEXMQ3ZCV2 418 aa13.35□□□□□ -0.27
CTNNA1-205ENST00000517904 FAM117BQ6P1L5 589 aa13.35□□□□□ -0.27
CTNNA1-205ENST00000517904 CHST3Q7LGC8 479 aa13.35□□□□□ -0.27
CTNNA1-205ENST00000517904 ALYREFQ86V81 257 aaKnown RBP13.35□□□□□ -0.27
CTNNA1-205ENST00000517904 MIER1Q8N108 512 aa13.35□□□□□ -0.27
CTNNA1-205ENST00000517904 GJD3Q8N144 294 aa13.35□□□□□ -0.27
CTNNA1-205ENST00000517904 TBC1D5Q92609 795 aa13.35□□□□□ -0.27
CTNNA1-205ENST00000517904 WNT8BQ93098 351 aa13.35□□□□□ -0.27
CTNNA1-205ENST00000517904 TOMM22Q9NS69 142 aa13.35□□□□□ -0.27
CTNNA1-205ENST00000517904 TCP11L1Q9NUJ3 509 aa13.35□□□□□ -0.27
CTNNA1-205ENST00000517904 GTF2IRD1Q9UHL9 959 aa13.35□□□□□ -0.27
CTNNA1-205ENST00000517904 RCAN3Q9UKA8 241 aa13.35□□□□□ -0.27
CTNNA1-205ENST00000517904 ABHD14A-ACY1A0A1B0GW23 586 aa13.34□□□□□ -0.27
CTNNA1-205ENST00000517904 GH1P01241 217 aa13.34□□□□□ -0.27
CTNNA1-205ENST00000517904 SNHG28P0DPA3 235 aa13.34□□□□□ -0.27
CTNNA1-205ENST00000517904 TRIM71Q2Q1W2 868 aaKnown RBP13.34□□□□□ -0.27
CTNNA1-205ENST00000517904 USH1GQ495M9 461 aa13.34□□□□□ -0.27
CTNNA1-205ENST00000517904 RRP12Q5JTH9 1297 aaKnown RBP13.34□□□□□ -0.27
CTNNA1-205ENST00000517904 SEPT14Q6ZU15 432 aa13.34□□□□□ -0.27
CTNNA1-205ENST00000517904 C17orf80Q9BSJ5 609 aa13.34□□□□□ -0.27
CTNNA1-205ENST00000517904 CPVLQ9H3G5 476 aa13.34□□□□□ -0.27
CTNNA1-205ENST00000517904 COL20A1Q9P218 1284 aa13.34□□□□□ -0.27
CTNNA1-205ENST00000517904 HDAC6Q9UBN7 1215 aa13.34□□□□□ -0.27
CTNNA1-205ENST00000517904 PNMA2Q9UL42 364 aa13.34□□□□□ -0.27
CTNNA1-205ENST00000517904 PARNO95453 639 aaKnown RBP13.33□□□□□ -0.28
CTNNA1-205ENST00000517904 GOLGA8HP0CJ92 632 aa13.33□□□□□ -0.28
CTNNA1-205ENST00000517904 MKRN4PQ13434 485 aaPredicted RBP13.33□□□□□ -0.28
CTNNA1-205ENST00000517904 IKBKEQ14164 716 aa13.33□□□□□ -0.28
CTNNA1-205ENST00000517904 ALX1Q15699 326 aa13.33□□□□□ -0.28
CTNNA1-205ENST00000517904 ZNF618Q5T7W0 954 aa13.33□□□□□ -0.28
CTNNA1-205ENST00000517904 PTCRAQ6ISU1 281 aaPredicted RBP13.33□□□□□ -0.28
CTNNA1-205ENST00000517904 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.33□□□□□ -0.28
CTNNA1-205ENST00000517904 RGS22Q8NE09 1264 aa13.33□□□□□ -0.28
CTNNA1-205ENST00000517904 TAAR1Q96RJ0 339 aa13.33□□□□□ -0.28
CTNNA1-205ENST00000517904 MICAL3Q7RTP6 2002 aa13.32□□□□□ -0.28
CTNNA1-205ENST00000517904 B4DLN1 442 aa13.32□□□□□ -0.28
CTNNA1-205ENST00000517904 FGAP02671 866 aa13.32□□□□□ -0.28
CTNNA1-205ENST00000517904 ZNF286BP0CG31 522 aa13.32□□□□□ -0.28
CTNNA1-205ENST00000517904 MX1P20591 662 aa13.32□□□□□ -0.28
CTNNA1-205ENST00000517904 CASTP20810 708 aaKnown RBP13.32□□□□□ -0.28
CTNNA1-205ENST00000517904 SSTR3P32745 418 aaPredicted RBP13.32□□□□□ -0.28
CTNNA1-205ENST00000517904 PSEN2P49810 448 aa13.32□□□□□ -0.28
CTNNA1-205ENST00000517904 MRPL12P52815 198 aaKnown RBP13.32□□□□□ -0.28
CTNNA1-205ENST00000517904 ZNF200P98182 395 aaPredicted RBP13.32□□□□□ -0.28
CTNNA1-205ENST00000517904 PTK7Q13308 1070 aa13.32□□□□□ -0.28
CTNNA1-205ENST00000517904 HIC1Q14526 733 aa13.32□□□□□ -0.28
CTNNA1-205ENST00000517904 DGKDQ16760 1214 aa13.32□□□□□ -0.28
CTNNA1-205ENST00000517904 C7orf31Q8N865 590 aa13.32□□□□□ -0.28
CTNNA1-205ENST00000517904 SYTL5Q8TDW5 730 aaPredicted RBP13.32□□□□□ -0.28
CTNNA1-205ENST00000517904 ALG1Q9BT22 464 aa13.32□□□□□ -0.28
CTNNA1-205ENST00000517904 UBA5Q9GZZ9 404 aa13.32□□□□□ -0.28
CTNNA1-205ENST00000517904 SALL3Q9BXA9 1300 aa13.32□□□□□ -0.28
CTNNA1-205ENST00000517904 GRXCR2A6NFK2 248 aa13.31□□□□□ -0.28
CTNNA1-205ENST00000517904 HAS3O00219 553 aa13.31□□□□□ -0.28
CTNNA1-205ENST00000517904 EFCAB14O75071 495 aa13.31□□□□□ -0.28
CTNNA1-205ENST00000517904 F2P00734 622 aa13.31□□□□□ -0.28
CTNNA1-205ENST00000517904 HTRA4P83105 476 aaPredicted RBP13.31□□□□□ -0.28
CTNNA1-205ENST00000517904 MFSD10Q14728 455 aa13.31□□□□□ -0.28
CTNNA1-205ENST00000517904 KIAA0753Q2KHM9 967 aa13.31□□□□□ -0.28
CTNNA1-205ENST00000517904 FBXO22Q8NEZ5 403 aa13.31□□□□□ -0.28
CTNNA1-205ENST00000517904 NEK9Q8TD19 979 aa13.31□□□□□ -0.28
CTNNA1-205ENST00000517904 NSUN6Q8TEA1 469 aaKnown RBP13.31□□□□□ -0.28
CTNNA1-205ENST00000517904 EMID1Q96A84 441 aaPredicted RBP13.31□□□□□ -0.28
CTNNA1-205ENST00000517904 FAM227BQ96M60 508 aa13.31□□□□□ -0.28
CTNNA1-205ENST00000517904 CRBNQ96SW2 442 aa13.31□□□□□ -0.28
CTNNA1-205ENST00000517904 FOXD4L1Q9NU39 408 aa13.31□□□□□ -0.28
CTNNA1-205ENST00000517904 DDX41Q9UJV9 622 aaKnown RBP13.31□□□□□ -0.28
CTNNA1-205ENST00000517904 MYH7BA7E2Y1 1941 aa13.31□□□□□ -0.28
CTNNA1-205ENST00000517904 MYO7AQ13402 2215 aa13.31□□□□□ -0.28
CTNNA1-205ENST00000517904 A0A0D9SFI3 127 aa13.3□□□□□ -0.28
CTNNA1-205ENST00000517904 H3BQ06 376 aaPredicted RBP13.3□□□□□ -0.28
CTNNA1-205ENST00000517904 LGR5O75473 907 aa13.3□□□□□ -0.28
CTNNA1-205ENST00000517904 HAND2P61296 217 aa13.3□□□□□ -0.28
CTNNA1-205ENST00000517904 STXBP2Q15833 593 aa13.3□□□□□ -0.28
CTNNA1-205ENST00000517904 CDC37Q16543 378 aaPredicted RBP13.3□□□□□ -0.28
CTNNA1-205ENST00000517904 GPATCH4Q5T3I0 446 aaKnown RBP13.3□□□□□ -0.28
CTNNA1-205ENST00000517904 DBF4BQ8NFT6 615 aa13.3□□□□□ -0.28
CTNNA1-205ENST00000517904 SP7Q8TDD2 431 aaPredicted RBP13.3□□□□□ -0.28
CTNNA1-205ENST00000517904 MRPL38Q96DV4 380 aaKnown RBP13.3□□□□□ -0.28
CTNNA1-205ENST00000517904 TTC14Q96N46 770 aa13.3□□□□□ -0.28
CTNNA1-205ENST00000517904 UIMC1Q96RL1 719 aa13.3□□□□□ -0.28
CTNNA1-205ENST00000517904 RMDN3Q96TC7 470 aa13.3□□□□□ -0.28
CTNNA1-205ENST00000517904 HELLSQ9NRZ9 838 aa13.3□□□□□ -0.28
CTNNA1-205ENST00000517904 INSL6Q9Y581 213 aa13.3□□□□□ -0.28
CTNNA1-205ENST00000517904 ZNF318Q5VUA4 2279 aa13.3□□□□□ -0.28
CTNNA1-205ENST00000517904 ALADP13716 330 aa13.29□□□□□ -0.28
CTNNA1-205ENST00000517904 EPC2Q52LR7 807 aa13.29□□□□□ -0.28
CTNNA1-205ENST00000517904 ZNF589Q86UQ0 364 aaPredicted RBP13.29□□□□□ -0.28
CTNNA1-205ENST00000517904 TBC1D10CQ8IV04 446 aa13.29□□□□□ -0.28
CTNNA1-205ENST00000517904 MYOCDQ8IZQ8 938 aa13.29□□□□□ -0.28
CTNNA1-205ENST00000517904 PPTC7Q8NI37 304 aa13.29□□□□□ -0.28
CTNNA1-205ENST00000517904 IWS1Q96ST2 819 aa13.29□□□□□ -0.28
CTNNA1-205ENST00000517904 ZKSCAN3Q9BRR0 538 aa13.29□□□□□ -0.28
CTNNA1-205ENST00000517904 KATNAL1Q9BW62 490 aa13.29□□□□□ -0.28
CTNNA1-205ENST00000517904 PCDHB15Q9Y5E8 787 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms