RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 CIITAP33076 1130 aa29.71■■■□□ 2.35
COL13A1-210ENST00000517713 PBX1P40424 430 aa29.71■■■□□ 2.35
COL13A1-210ENST00000517713 TBC1D10BQ4KMP7 808 aaPredicted RBP29.71■■■□□ 2.35
COL13A1-210ENST00000517713 TRMT1Q9NXH9 659 aaKnown RBP29.71■■■□□ 2.35
COL13A1-210ENST00000517713 FCER1AP12319 257 aa29.7■■■□□ 2.34
COL13A1-210ENST00000517713 TNNT1P13805 278 aa29.7■■■□□ 2.34
COL13A1-210ENST00000517713 E4F1Q66K89 784 aaPredicted RBP29.7■■■□□ 2.34
COL13A1-210ENST00000517713 LENG9Q96B70 501 aa29.7■■■□□ 2.34
COL13A1-210ENST00000517713 HACL1Q9UJ83 578 aa29.7■■■□□ 2.34
COL13A1-210ENST00000517713 FAM86B1E9PN63 330 aa29.69■■■□□ 2.34
COL13A1-210ENST00000517713 CYP3A4P08684 503 aa29.69■■■□□ 2.34
COL13A1-210ENST00000517713 FAM86B2P0C5J1 330 aa29.69■■■□□ 2.34
COL13A1-210ENST00000517713 PTGER2P43116 358 aa29.69■■■□□ 2.34
COL13A1-210ENST00000517713 COBLL1Q53SF7 1204 aa29.69■■■□□ 2.34
COL13A1-210ENST00000517713 FBXO28Q9NVF7 368 aa29.69■■■□□ 2.34
COL13A1-210ENST00000517713 MRPL11Q9Y3B7 192 aaKnown RBP29.69■■■□□ 2.34
COL13A1-210ENST00000517713 ASTN2O75129 1339 aaPredicted RBP29.69■■■□□ 2.34
COL13A1-210ENST00000517713 CFBP00751 764 aa29.69■■■□□ 2.34
COL13A1-210ENST00000517713 COPB1P53618 953 aaKnown RBP29.69■■■□□ 2.34
COL13A1-210ENST00000517713 TTI2Q6NXR4 508 aa29.69■■■□□ 2.34
COL13A1-210ENST00000517713 SAMD1Q6SPF0 538 aaPredicted RBP29.69■■■□□ 2.34
COL13A1-210ENST00000517713 DYMQ7RTS9 669 aa29.69■■■□□ 2.34
COL13A1-210ENST00000517713 FCHSD1Q86WN1 690 aa29.69■■■□□ 2.34
COL13A1-210ENST00000517713 TC2NQ8N9U0 490 aa29.69■■■□□ 2.34
COL13A1-210ENST00000517713 TRIM47Q96LD4 638 aa29.69■■■□□ 2.34
COL13A1-210ENST00000517713 THAP9Q9H5L6 903 aa29.69■■■□□ 2.34
COL13A1-210ENST00000517713 N4BP3O15049 544 aa29.68■■■□□ 2.34
COL13A1-210ENST00000517713 CCNE1P24864 410 aa29.68■■■□□ 2.34
COL13A1-210ENST00000517713 IRF2BP1Q8IU81 584 aa29.68■■■□□ 2.34
COL13A1-210ENST00000517713 P2RX5Q93086 422 aa29.68■■■□□ 2.34
COL13A1-210ENST00000517713 BICDL2A1A5D9 508 aa29.67■■■□□ 2.34
COL13A1-210ENST00000517713 PSDA5PKW4 1024 aaPredicted RBP29.67■■■□□ 2.34
COL13A1-210ENST00000517713 GCOM1H8Y6P7 765 aaPredicted RBP29.67■■■□□ 2.34
COL13A1-210ENST00000517713 POLR2MP0CAP2 368 aa29.67■■■□□ 2.34
COL13A1-210ENST00000517713 ADKP55263 362 aaKnown RBP29.67■■■□□ 2.34
COL13A1-210ENST00000517713 KIF4BQ2VIQ3 1234 aa29.67■■■□□ 2.34
COL13A1-210ENST00000517713 CREBRFQ8IUR6 639 aa29.67■■■□□ 2.34
COL13A1-210ENST00000517713 NOC3LQ8WTT2 800 aaKnown RBP29.67■■■□□ 2.34
COL13A1-210ENST00000517713 TBC1D5Q92609 795 aa29.67■■■□□ 2.34
COL13A1-210ENST00000517713 DDX12PQ92771 950 aa29.67■■■□□ 2.34
COL13A1-210ENST00000517713 FAM20AQ96MK3 541 aa29.67■■■□□ 2.34
COL13A1-210ENST00000517713 VPS16Q9H269 839 aa29.67■■■□□ 2.34
COL13A1-210ENST00000517713 GINM1Q9NU53 330 aa29.67■■■□□ 2.34
COL13A1-210ENST00000517713 SMCHD1A6NHR9 2005 aa29.67■■■□□ 2.34
COL13A1-210ENST00000517713 UQCRHLA0A096LP55 91 aa29.67■■■□□ 2.34
COL13A1-210ENST00000517713 UQCRHP07919 91 aa29.67■■■□□ 2.34
COL13A1-210ENST00000517713 ZNF76P36508 570 aa29.67■■■□□ 2.34
COL13A1-210ENST00000517713 STAT3P40763 770 aa29.67■■■□□ 2.34
COL13A1-210ENST00000517713 KIAA0895Q8NCT3 520 aa29.67■■■□□ 2.34
COL13A1-210ENST00000517713 SRRTQ9BXP5 876 aaKnown RBP29.67■■■□□ 2.34
COL13A1-210ENST00000517713 DEFB129Q9H1M3 183 aa29.67■■■□□ 2.34
COL13A1-210ENST00000517713 TAB2Q9NYJ8 693 aa29.67■■■□□ 2.34
COL13A1-210ENST00000517713 KIAA1024Q9UPX6 916 aa29.67■■■□□ 2.34
COL13A1-210ENST00000517713 CTNND1O60716 968 aaKnown RBP29.66■■■□□ 2.34
COL13A1-210ENST00000517713 NYAP1Q6ZVC0 841 aa29.66■■■□□ 2.34
COL13A1-210ENST00000517713 TMEM139Q8IV31 216 aa29.66■■■□□ 2.34
COL13A1-210ENST00000517713 HPS3Q969F9 1004 aa29.66■■■□□ 2.34
COL13A1-210ENST00000517713 SLC39A2Q9NP94 309 aa29.66■■■□□ 2.34
COL13A1-210ENST00000517713 ABCB11O95342 1321 aa29.66■■■□□ 2.34
COL13A1-210ENST00000517713 SPIRE1Q08AE8 756 aa29.66■■■□□ 2.34
COL13A1-210ENST00000517713 PTPN14Q15678 1187 aa29.66■■■□□ 2.34
COL13A1-210ENST00000517713 PPFIBP1Q86W92 1011 aa29.66■■■□□ 2.34
COL13A1-210ENST00000517713 DUSP9Q99956 384 aaKnown RBP29.66■■■□□ 2.34
COL13A1-210ENST00000517713 EEF1GP26641 437 aaKnown RBP29.65■■■□□ 2.34
COL13A1-210ENST00000517713 INPP5BP32019 993 aa29.65■■■□□ 2.34
COL13A1-210ENST00000517713 LDHDQ86WU2 507 aa29.65■■■□□ 2.34
COL13A1-210ENST00000517713 NLGN2Q8NFZ4 835 aa29.65■■■□□ 2.34
COL13A1-210ENST00000517713 BAG1Q99933 345 aaPredicted RBP29.65■■■□□ 2.34
COL13A1-210ENST00000517713 ITIH6Q6UXX5 1313 aa29.65■■■□□ 2.34
COL13A1-210ENST00000517713 AKR1B15C9JRZ8 316 aaPredicted RBP29.64■■■□□ 2.34
COL13A1-210ENST00000517713 MSH4O15457 936 aa29.64■■■□□ 2.34
COL13A1-210ENST00000517713 HAUS3Q68CZ6 603 aa29.64■■■□□ 2.34
COL13A1-210ENST00000517713 ANKRD40Q6AI12 368 aa29.64■■■□□ 2.34
COL13A1-210ENST00000517713 MYRIPQ8NFW9 859 aa29.64■■■□□ 2.34
COL13A1-210ENST00000517713 LPAR1Q92633 364 aa29.64■■■□□ 2.34
COL13A1-210ENST00000517713 KIAA1683Q9H0B3 1180 aa29.64■■■□□ 2.34
COL13A1-210ENST00000517713 ZNF541Q9H0D2 1346 aa29.64■■■□□ 2.34
COL13A1-210ENST00000517713 POTEB3A0JP26 581 aa29.64■■■□□ 2.33
COL13A1-210ENST00000517713 POTECB2RU33 542 aa29.64■■■□□ 2.33
COL13A1-210ENST00000517713 E9PMD0 336 aa29.64■■■□□ 2.33
COL13A1-210ENST00000517713 WDR46O15213 610 aaKnown RBP29.64■■■□□ 2.33
COL13A1-210ENST00000517713 IDEP14735 1019 aa29.64■■■□□ 2.33
COL13A1-210ENST00000517713 HOXA7P31268 230 aaPredicted RBP29.64■■■□□ 2.33
COL13A1-210ENST00000517713 POTEBQ6S5H4 581 aa29.64■■■□□ 2.33
COL13A1-210ENST00000517713 CSGALNACT2Q8N6G5 542 aa29.64■■■□□ 2.33
COL13A1-210ENST00000517713 ERMNQ8TAM6 284 aa29.64■■■□□ 2.33
COL13A1-210ENST00000517713 MAGEC2Q9UBF1 373 aaPredicted RBP29.64■■■□□ 2.33
COL13A1-210ENST00000517713 ARHGAP6O43182 974 aa29.63■■■□□ 2.33
COL13A1-210ENST00000517713 MED24O75448 989 aa29.63■■■□□ 2.33
COL13A1-210ENST00000517713 PSMD2Q13200 908 aa29.63■■■□□ 2.33
COL13A1-210ENST00000517713 NCAPH2Q6IBW4 605 aa29.63■■■□□ 2.33
COL13A1-210ENST00000517713 CYP2W1Q8TAV3 490 aa29.63■■■□□ 2.33
COL13A1-210ENST00000517713 PPP1R13BQ96KQ4 1090 aa29.63■■■□□ 2.33
COL13A1-210ENST00000517713 STK24Q9Y6E0 443 aa29.63■■■□□ 2.33
COL13A1-210ENST00000517713 STX10O60499 249 aa29.62■■■□□ 2.33
COL13A1-210ENST00000517713 RBL2Q08999 1139 aa29.62■■■□□ 2.33
COL13A1-210ENST00000517713 NBPF12Q5TAG4 269 aaPredicted RBP29.62■■■□□ 2.33
COL13A1-210ENST00000517713 CEP135Q66GS9 1140 aa29.62■■■□□ 2.33
COL13A1-210ENST00000517713 DNAJC19Q96DA6 116 aa29.62■■■□□ 2.33
COL13A1-210ENST00000517713 EHMT1Q9H9B1 1298 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms