RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 TBC1D10BQ4KMP7 808 aaPredicted RBP3.3□□□□□ -1.88
SKP1-204ENST00000517691 TNNI3KQ59H18 835 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 MFSD14BQ5SR56 506 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 TTC39AQ5SRH9 613 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 DACT2Q5SW24 774 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 AACSQ86V21 672 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 PNMA8AQ86V59 439 aaPredicted RBP3.3□□□□□ -1.88
SKP1-204ENST00000517691 KIAA0825Q8IV33 1275 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 LILRB2Q8N423 598 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 GOLGA6L1Q8N7Z2 621 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 GLIS3Q8NEA6 775 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 AGBL3Q8NEM8 1001 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 TDRD7Q8NHU6 1098 aaKnown RBP3.3□□□□□ -1.88
SKP1-204ENST00000517691 KIF1BPQ96EK5 621 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 CEP63Q96MT8 703 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 GAS2L1Q99501 681 aaPredicted RBP3.3□□□□□ -1.88
SKP1-204ENST00000517691 APBA2Q99767 749 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 BCO2Q9BYV7 579 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 LRRCC1Q9C099 1032 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 CRISPLD1Q9H336 500 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 RWDD1Q9H446 243 aaPredicted RBP3.3□□□□□ -1.88
SKP1-204ENST00000517691 TAF1DQ9H5J8 278 aaPredicted RBP3.3□□□□□ -1.88
SKP1-204ENST00000517691 ZNF408Q9H9D4 720 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 GPAMQ9HCL2 828 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 NPHS2Q9NP85 383 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 ADARB2Q9NS39 739 aaKnown RBP3.3□□□□□ -1.88
SKP1-204ENST00000517691 HOMER2Q9NSB8 354 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 TYW1Q9NV66 732 aaKnown RBP3.3□□□□□ -1.88
SKP1-204ENST00000517691 SNTG2Q9NY99 539 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 FPGT-TNNI3KV9GXZ4 949 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 DLEC1Q9Y238 1755 aa3.3□□□□□ -1.88
SKP1-204ENST00000517691 TOMM70O94826 608 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 FGAP02671 866 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 CYP2E1P05181 493 aaPredicted RBP3.29□□□□□ -1.88
SKP1-204ENST00000517691 USP17L7P0C7H9 530 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 UQCRFS1P1P0C7P4 283 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 ETFBP38117 255 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 TAF1CQ15572 869 aaPredicted RBP3.29□□□□□ -1.88
SKP1-204ENST00000517691 BRDTQ58F21 947 aaPredicted RBP3.29□□□□□ -1.88
SKP1-204ENST00000517691 C10orf62Q5T681 223 aaPredicted RBP3.29□□□□□ -1.88
SKP1-204ENST00000517691 ANKRD45Q5TZF3 282 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 RIPOR1Q6ZS17 1223 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 USP50Q70EL3 339 aaPredicted RBP3.29□□□□□ -1.88
SKP1-204ENST00000517691 WDR66Q8TBY9 1149 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 TBC1D22AQ8WUA7 517 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 DPF2Q92785 391 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 EAF2Q96CJ1 260 aaPredicted RBP3.29□□□□□ -1.88
SKP1-204ENST00000517691 DBNDD2Q9BQY9 259 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 RUBCNLQ9H714 662 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 DCTPP1Q9H773 170 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 MYOZ2Q9NPC6 264 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 GPR108Q9NPR9 543 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 ABCF2Q9UG63 623 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 SWAP70Q9UH65 585 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 HDAC9Q9UKV0 1011 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 DENND2AQ9ULE3 1009 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 MRVI1Q9Y6F6 885 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 COL4A5P29400 1685 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 LAMB2P55268 1798 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 TAF1P21675 1872 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 MYO3BQ8WXR4 1341 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 IRS2Q9Y4H2 1338 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 BRCA1P38398 1863 aaKnown RBP3.29□□□□□ -1.88
SKP1-204ENST00000517691 EPB41L2O43491 1005 aaKnown RBP3.29□□□□□ -1.88
SKP1-204ENST00000517691 BPNT1O95861 308 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 IGHDP01880 384 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 CD53P19397 219 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 ST13P50502 369 aaKnown RBP3.29□□□□□ -1.88
SKP1-204ENST00000517691 RASGRF1Q13972 1273 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 GRM2Q14416 872 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 DLGAP5Q15398 846 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 KIF4BQ2VIQ3 1234 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 TKFCQ3LXA3 575 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 SAMD5Q5TGI4 173 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 PEAR1Q5VY43 1037 aaPredicted RBP3.29□□□□□ -1.88
SKP1-204ENST00000517691 MAP1SQ66K74 1059 aaPredicted RBP3.29□□□□□ -1.88
SKP1-204ENST00000517691 ERMP1Q7Z2K6 904 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 LDHDQ86WU2 507 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 CERS5Q8N5B7 392 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 SPATA5Q8NB90 893 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 SMC1BQ8NDV3 1235 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 C3orf58Q8NDZ4 430 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 TRPM4Q8TD43 1214 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 MKL1Q969V6 931 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 GTPBP3Q969Y2 492 aaKnown RBP3.29□□□□□ -1.88
SKP1-204ENST00000517691 DCPSQ96C86 337 aaKnown RBP3.29□□□□□ -1.88
SKP1-204ENST00000517691 SLKQ9H2G2 1235 aaPredicted RBP3.29□□□□□ -1.88
SKP1-204ENST00000517691 C11orf16Q9NQ32 467 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 AVENQ9NQS1 362 aaPredicted RBP3.29□□□□□ -1.88
SKP1-204ENST00000517691 LATS2Q9NRM7 1088 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 ABI2Q9NYB9 513 aaPredicted RBP3.29□□□□□ -1.88
SKP1-204ENST00000517691 TLR7Q9NYK1 1049 aaKnown RBP3.29□□□□□ -1.88
SKP1-204ENST00000517691 RAI14Q9P0K7 980 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 HMG20BQ9P0W2 317 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 LRP2BPQ9P2M1 347 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 FAM8A1Q9UBU6 413 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 KLF15Q9UIH9 416 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 GGT7Q9UJ14 662 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 ARFGEF1Q9Y6D6 1849 aa3.29□□□□□ -1.88
SKP1-204ENST00000517691 CACNA1SQ13698 1873 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms