RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 FGFR1P11362 822 aa8.14□□□□□ -1.11
SCARNA1-201ENST00000517138 MTERF2Q49AM1 385 aa8.14□□□□□ -1.11
SCARNA1-201ENST00000517138 ZNF385BQ569K4 471 aa8.14□□□□□ -1.11
SCARNA1-201ENST00000517138 NBPF6Q5VWK0 638 aa8.14□□□□□ -1.11
SCARNA1-201ENST00000517138 CNKSR3Q6P9H4 555 aa8.14□□□□□ -1.11
SCARNA1-201ENST00000517138 NSMFQ6X4W1 530 aa8.14□□□□□ -1.11
SCARNA1-201ENST00000517138 NBPF4Q96M43 638 aa8.14□□□□□ -1.11
SCARNA1-201ENST00000517138 DNAJC2Q99543 621 aaKnown RBP8.14□□□□□ -1.11
SCARNA1-201ENST00000517138 HIRIP3Q9BW71 556 aaPredicted RBP8.14□□□□□ -1.11
SCARNA1-201ENST00000517138 ASXL2Q76L83 1435 aa8.13□□□□□ -1.11
SCARNA1-201ENST00000517138 TRAV20A0A0B4J274 112 aa8.13□□□□□ -1.11
SCARNA1-201ENST00000517138 SSRP1Q08945 709 aaKnown RBP8.13□□□□□ -1.11
SCARNA1-201ENST00000517138 LRRC47Q8N1G4 583 aaKnown RBP8.13□□□□□ -1.11
SCARNA1-201ENST00000517138 ARMC5Q96C12 935 aa8.13□□□□□ -1.11
SCARNA1-201ENST00000517138 TMEM169Q96HH4 297 aa8.13□□□□□ -1.11
SCARNA1-201ENST00000517138 PHF20Q9BVI0 1012 aa8.13□□□□□ -1.11
SCARNA1-201ENST00000517138 SNTG2Q9NY99 539 aa8.13□□□□□ -1.11
SCARNA1-201ENST00000517138 BTBD11A6QL63 1104 aa8.12□□□□□ -1.11
SCARNA1-201ENST00000517138 MYO1BO43795 1136 aa8.12□□□□□ -1.11
SCARNA1-201ENST00000517138 FAM153BP0C7A2 387 aa8.12□□□□□ -1.11
SCARNA1-201ENST00000517138 FOXO4P98177 505 aa8.12□□□□□ -1.11
SCARNA1-201ENST00000517138 LSAMPQ13449 338 aa8.12□□□□□ -1.11
SCARNA1-201ENST00000517138 FAM209AQ5JX71 171 aa8.12□□□□□ -1.11
SCARNA1-201ENST00000517138 AMIGO3Q86WK7 504 aa8.12□□□□□ -1.11
SCARNA1-201ENST00000517138 PWWP2AQ96N64 755 aa8.12□□□□□ -1.11
SCARNA1-201ENST00000517138 DEPDC7Q96QD5 511 aa8.12□□□□□ -1.11
SCARNA1-201ENST00000517138 CLDND1Q9NY35 253 aa8.12□□□□□ -1.11
SCARNA1-201ENST00000517138 NUDT5Q9UKK9 219 aa8.12□□□□□ -1.11
SCARNA1-201ENST00000517138 PALD1Q9ULE6 856 aa8.12□□□□□ -1.11
SCARNA1-201ENST00000517138 NCAM1P13591 858 aa8.11□□□□□ -1.11
SCARNA1-201ENST00000517138 PFKLP17858 780 aa8.11□□□□□ -1.11
SCARNA1-201ENST00000517138 AFF3P51826 1226 aaKnown RBP8.11□□□□□ -1.11
SCARNA1-201ENST00000517138 DCP2Q8IU60 420 aaKnown RBP8.11□□□□□ -1.11
SCARNA1-201ENST00000517138 RIOX2Q8IUF8 465 aa8.11□□□□□ -1.11
SCARNA1-201ENST00000517138 FAM26EQ8N5C1 309 aa8.11□□□□□ -1.11
SCARNA1-201ENST00000517138 NOX5Q96PH1 765 aa8.11□□□□□ -1.11
SCARNA1-201ENST00000517138 JAM3Q9BX67 310 aa8.11□□□□□ -1.11
SCARNA1-201ENST00000517138 GPR27Q9NS67 375 aa8.11□□□□□ -1.11
SCARNA1-201ENST00000517138 RFXAPO00287 272 aa8.1□□□□□ -1.11
SCARNA1-201ENST00000517138 GTF2A2P52657 109 aa8.1□□□□□ -1.11
SCARNA1-201ENST00000517138 TARBP2Q15633 366 aaKnown RBP8.1□□□□□ -1.11
SCARNA1-201ENST00000517138 MROH9Q5TGP6 573 aa8.1□□□□□ -1.11
SCARNA1-201ENST00000517138 ADGRG2Q8IZP9 1017 aa8.1□□□□□ -1.11
SCARNA1-201ENST00000517138 SMARCC2Q8TAQ2 1214 aa8.1□□□□□ -1.11
SCARNA1-201ENST00000517138 ZNF669Q96BR6 464 aaPredicted RBP8.1□□□□□ -1.11
SCARNA1-201ENST00000517138 EXOC2Q96KP1 924 aa8.1□□□□□ -1.11
SCARNA1-201ENST00000517138 TRAF6Q9Y4K3 522 aa8.1□□□□□ -1.11
SCARNA1-201ENST00000517138 KDM2BQ8NHM5 1336 aa8.09□□□□□ -1.11
SCARNA1-201ENST00000517138 ZBTB7AO95365 584 aa8.09□□□□□ -1.11
SCARNA1-201ENST00000517138 C8BP07358 591 aa8.09□□□□□ -1.11
SCARNA1-201ENST00000517138 IFRD2Q12894 506 aaPredicted RBP8.09□□□□□ -1.11
SCARNA1-201ENST00000517138 SLC9A5Q14940 896 aa8.09□□□□□ -1.11
SCARNA1-201ENST00000517138 SF3A1Q15459 793 aaKnown RBP8.09□□□□□ -1.11
SCARNA1-201ENST00000517138 KRTAP19-4Q3LI73 84 aa8.09□□□□□ -1.11
SCARNA1-201ENST00000517138 FBLN7Q53RD9 439 aa8.09□□□□□ -1.11
SCARNA1-201ENST00000517138 LCE4AQ5TA78 99 aa8.09□□□□□ -1.11
SCARNA1-201ENST00000517138 TCERG1LQ5VWI1 586 aa8.09□□□□□ -1.11
SCARNA1-201ENST00000517138 MILR1Q7Z6M3 343 aa8.09□□□□□ -1.11
SCARNA1-201ENST00000517138 NPM2Q86SE8 214 aaKnown RBP8.09□□□□□ -1.11
SCARNA1-201ENST00000517138 SIAH1Q8IUQ4 282 aa8.09□□□□□ -1.11
SCARNA1-201ENST00000517138 ZBTB38Q8NAP3 1195 aaPredicted RBP8.09□□□□□ -1.11
SCARNA1-201ENST00000517138 TP53I13Q8NBR0 393 aaPredicted RBP8.09□□□□□ -1.11
SCARNA1-201ENST00000517138 SREK1Q8WXA9 508 aaKnown RBP8.09□□□□□ -1.11
SCARNA1-201ENST00000517138 SEC14L1Q92503 715 aa8.09□□□□□ -1.11
SCARNA1-201ENST00000517138 DNAJC7Q99615 494 aa8.09□□□□□ -1.11
SCARNA1-201ENST00000517138 RNF38Q9H0F5 515 aa8.09□□□□□ -1.11
SCARNA1-201ENST00000517138 A0A1B0GTL3 188 aa8.08□□□□□ -1.12
SCARNA1-201ENST00000517138 H7BY64 318 aa8.08□□□□□ -1.12
SCARNA1-201ENST00000517138 TRIM13O60858 407 aa8.08□□□□□ -1.12
SCARNA1-201ENST00000517138 SLC6A11P48066 632 aa8.08□□□□□ -1.12
SCARNA1-201ENST00000517138 FNIP1Q8TF40 1166 aa8.08□□□□□ -1.12
SCARNA1-201ENST00000517138 DCAF4Q8WV16 495 aa8.08□□□□□ -1.12
SCARNA1-201ENST00000517138 DDX11Q96FC9 970 aa8.08□□□□□ -1.12
SCARNA1-201ENST00000517138 SRPK1Q96SB4 655 aaKnown RBP8.08□□□□□ -1.12
SCARNA1-201ENST00000517138 AP5M1Q9H0R1 490 aa8.08□□□□□ -1.12
SCARNA1-201ENST00000517138 FAN1Q9Y2M0 1017 aa8.08□□□□□ -1.12
SCARNA1-201ENST00000517138 FFAR3O14843 346 aa8.07□□□□□ -1.12
SCARNA1-201ENST00000517138 C6orf222P0C671 652 aaPredicted RBP8.07□□□□□ -1.12
SCARNA1-201ENST00000517138 HTRA3P83110 453 aa8.07□□□□□ -1.12
SCARNA1-201ENST00000517138 CACNB2Q08289 660 aaPredicted RBP8.07□□□□□ -1.12
SCARNA1-201ENST00000517138 VWA3BQ502W6 1294 aa8.07□□□□□ -1.12
SCARNA1-201ENST00000517138 STYK1Q6J9G0 422 aa8.07□□□□□ -1.12
SCARNA1-201ENST00000517138 LBX2Q6XYB7 198 aa8.07□□□□□ -1.12
SCARNA1-201ENST00000517138 B3GNT8Q7Z7M8 397 aa8.07□□□□□ -1.12
SCARNA1-201ENST00000517138 STK32CQ86UX6 486 aa8.07□□□□□ -1.12
SCARNA1-201ENST00000517138 ARRDC4Q8NCT1 418 aa8.07□□□□□ -1.12
SCARNA1-201ENST00000517138 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.07□□□□□ -1.12
SCARNA1-201ENST00000517138 COA3Q9Y2R0 106 aaPredicted RBP8.07□□□□□ -1.12
SCARNA1-201ENST00000517138 TRBV23-1A0A0A0MS06 115 aa8.06□□□□□ -1.12
SCARNA1-201ENST00000517138 BMP7P18075 431 aa8.06□□□□□ -1.12
SCARNA1-201ENST00000517138 STAT5AP42229 794 aa8.06□□□□□ -1.12
SCARNA1-201ENST00000517138 DLX2Q07687 328 aaPredicted RBP8.06□□□□□ -1.12
SCARNA1-201ENST00000517138 RSPO2Q6UXX9 243 aaPredicted RBP8.06□□□□□ -1.12
SCARNA1-201ENST00000517138 RBM12BQ8IXT5 1001 aaKnown RBP8.06□□□□□ -1.12
SCARNA1-201ENST00000517138 ZNF526Q8TF50 670 aaPredicted RBP8.06□□□□□ -1.12
SCARNA1-201ENST00000517138 CPA5Q8WXQ8 436 aa8.06□□□□□ -1.12
SCARNA1-201ENST00000517138 CDC6Q99741 560 aa8.06□□□□□ -1.12
SCARNA1-201ENST00000517138 PMF1-BGLAPU3KQ54 211 aa8.06□□□□□ -1.12
SCARNA1-201ENST00000517138 TADA3O75528 432 aa8.05□□□□□ -1.12
SCARNA1-201ENST00000517138 COL6A2P12110 1019 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms